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Volumn 73, Issue 3-4, 2011, Pages 134-152

Phylogenetic and preliminary phenotypic analysis of yeast PAQR receptors: Potential antifungal targets

Author keywords

Adiponectin; Antifungal; Filamentation; Fungi; Osmotin; PAQR; Phylogeny; Polyene; Progesterone; Saccharomyces cerevisiae

Indexed keywords

ANTIFUNGAL AGENT; CELL SURFACE RECEPTOR; IZH3 PROTEIN, S CEREVISIAE; MEMBRANE PROTEIN; NYSTATIN; PHO36 PROTEIN, S CEREVISIAE; POLYENE; SACCHAROMYCES CEREVISIAE PROTEIN;

EID: 84856338629     PISSN: 00222844     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00239-011-9462-3     Document Type: Article
Times cited : (22)

References (50)
  • 1
    • 0038376323 scopus 로고    scopus 로고
    • The comparative analysis of osmotins and osmotin-like PR-5 proteins
    • DOI 10.1055/s-2003-40723
    • Anzlovar S, Dermastia M (2003) The comparative analysis of osmotins and osmotin-like PR-5 proteins. Plant Biol 5:116-124 (Pubitemid 36725787)
    • (2003) Plant Biology , vol.5 , Issue.2 , pp. 116-124
    • Anzlovar, S.1    Dermastia, M.2
  • 2
    • 0030599455 scopus 로고    scopus 로고
    • Mechanism of action of hemolysin III from Bacillus cereus
    • DOI 10.1016/S0005-2736(96)00168-X
    • Baida GE, Kuzmin NP (1996) Mechanism of action of hemolysin III from Bacillus cereus. Biochim Biophys Acta 1284:122-124 (Pubitemid 26356143)
    • (1996) Biochimica et Biophysica Acta - Biomembranes , vol.1284 , Issue.2 , pp. 122-124
    • Baida, G.E.1    Kuzmin, N.P.2
  • 3
    • 1842636923 scopus 로고    scopus 로고
    • Identification of macrophage/microglia activation factor (MAF) associated with late endosomes/lysosomes in microglial cells
    • DOI 10.1016/S0014-5793(04)00244-3, PII S0014579304002443
    • Brauer AU, Nitsch R, Savaskan NE (2004) Identification of macrophage/microglia activation factor (MAF) associated with late endosomes/lysosomes in microglial cells. FEBS Lett 563:41-48 (Pubitemid 38471571)
    • (2004) FEBS Letters , vol.563 , Issue.1-3 , pp. 41-48
    • Brauer, A.U.1    Nitsch, R.2    Savaskan, N.E.3
  • 5
    • 0031663198 scopus 로고    scopus 로고
    • Origine et interrelation des champignons avec le vivant. Evolution durant les temps geologiques
    • Chabasse D (1998) Origin and interrelation of Fungi with the living. Evolution in geologic times. J Mycol Med 8:125-138 (Pubitemid 28451961)
    • (1998) Journal de Mycologie Medicale , vol.8 , Issue.3 , pp. 125-138
    • Chabasse, D.1
  • 6
    • 4344667061 scopus 로고    scopus 로고
    • Characterization and virulence of hemolysin III from Vibrio vulnificus
    • 15386100 1:CAS:528:DC%2BD2cXntVaqtbg%3D 10.1007/s00284-004-4288-5
    • Chen YC, Chang MC, Chuang YC, Jeang CL (2004) Characterization and virulence of hemolysin III from Vibrio vulnificus. Curr Microbiol 49:175-179
    • (2004) Curr Microbiol , vol.49 , pp. 175-179
    • Chen, Y.C.1    Chang, M.C.2    Chuang, Y.C.3    Jeang, C.L.4
  • 7
    • 0028568176 scopus 로고
    • TopPred II: An improved software for membrane protein structure predictions
    • 7704669 1:CAS:528:DyaK2MXjvVKksb8%3D
    • Claros MG, von Heijne G (1994) TopPred II: an improved software for membrane protein structure predictions. Comput Appl Biosci 10:685-686
    • (1994) Comput Appl Biosci , vol.10 , pp. 685-686
    • Claros, M.G.1    Von Heijne, G.2
  • 9
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE: Multiple sequence alignment with high accuracy and high throughput
    • DOI 10.1093/nar/gkh340
    • Edgar RC (2004) MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucl Acids Res 32:1792-1797 (Pubitemid 38832724)
    • (2004) Nucleic Acids Research , vol.32 , Issue.5 , pp. 1792-1797
    • Edgar, R.C.1
  • 11
    • 33845452848 scopus 로고    scopus 로고
    • A fungal phylogeny based on 42 complete genomes derived from supertree and combined gene analysis
    • 10.1186/1471-2148-6-15
    • Fitzpatrick DA, Logue ME, Stajich JE, Butler G (2006) A fungal phylogeny based on 42 complete genomes derived from supertree and combined gene analysis. BMC Evol Biol 6:15
    • (2006) BMC Evol Biol , vol.6 , pp. 15
    • Fitzpatrick, D.A.1    Logue, M.E.2    Stajich, J.E.3    Butler, G.4
  • 12
    • 70350576221 scopus 로고    scopus 로고
    • Adiponectin identified as an agonist for PAQR3/RKTG using a yeast-based assay system
    • 1:CAS:528:DC%2BD1MXkvFGmtLg%3D 10.1080/10799890902729456
    • Garitaonandia I, Smith JL, Kupchak BR, Lyons TJ (2009) Adiponectin identified as an agonist for PAQR3/RKTG using a yeast-based assay system. J Recept Signal Transduct 29:67-73
    • (2009) J Recept Signal Transduct , vol.29 , pp. 67-73
    • Garitaonandia, I.1    Smith, J.L.2    Kupchak, B.R.3    Lyons, T.J.4
  • 13
    • 0032873415 scopus 로고    scopus 로고
    • Three new dominant drug resistance cassettes for gene disruption in Saccharomyces cerevisiae
    • DOI 10.1002/(SICI)1097-0061(199910)15:14<1541::AID-YEA476>3.0.CO;2- K
    • Goldstein AL, McCusker JH (1999) Three new dominant drug resistance cassettes for gene disruption in Saccharomyces cerevisiae. Yeast 15:1541-1553 (Pubitemid 29472165)
    • (1999) Yeast , vol.15 , Issue.14 , pp. 1541-1553
    • Goldstein, A.L.1    McCusker, J.H.2
  • 14
    • 67149106149 scopus 로고    scopus 로고
    • Additions, losses, and rearrangements on the evolutionary route from a reconstructed ancestor to the modern Saccharomyces cerevisiae genome
    • 19436716 10.1371/journal.pgen.1000485
    • Gordon JL, Byrne KP, Wolfe KH (2009) Additions, losses, and rearrangements on the evolutionary route from a reconstructed ancestor to the modern Saccharomyces cerevisiae genome. PLoS Genet 5:e1000485
    • (2009) PLoS Genet , vol.5 , pp. 1000485
    • Gordon, J.L.1    Byrne, K.P.2    Wolfe, K.H.3
  • 15
    • 74549125386 scopus 로고    scopus 로고
    • SeaView version 4: A multiplatform graphical user interface for sequence alignment and phylogenetic tree building
    • 19854763 1:CAS:528:DC%2BC3cXntlGgtw%3D%3D 10.1093/molbev/msp259
    • Gouy M, Guindon S, Gascuel O (2010) SeaView version 4: a multiplatform graphical user interface for sequence alignment and phylogenetic tree building. Mol Biol Evol 27:221-224
    • (2010) Mol Biol Evol , vol.27 , pp. 221-224
    • Gouy, M.1    Guindon, S.2    Gascuel, O.3
  • 16
    • 68049139485 scopus 로고    scopus 로고
    • Estimating maximum likelihood phylogenies with PhyML
    • 19378142 1:CAS:528:DC%2BD1MXmvVSqtbw%3D 10.1007/978-1-59745-251-9-6
    • Guindon S, Delsuc F, Dufayard JF, Gascuel O (2009) Estimating maximum likelihood phylogenies with PhyML. Methods Mol Biol 537:113-137
    • (2009) Methods Mol Biol , vol.537 , pp. 113-137
    • Guindon, S.1    Delsuc, F.2    Dufayard, J.F.3    Gascuel, O.4
  • 18
    • 38749144782 scopus 로고    scopus 로고
    • Large-scale analysis of yeast filamentous growth by systematic gene disruption and overexpression
    • DOI 10.1091/mbc.E07-05-0519
    • Jin R, Dobry CJ, McCown PJ, Kumar A (2008) Large-scale analysis of yeast filamentous growth by systematic gene disruption and overexpression. Mol Biol Cell 19:284-296 (Pubitemid 351186153)
    • (2008) Molecular Biology of the Cell , vol.19 , Issue.1 , pp. 284-296
    • Jin, R.1    Dobry, C.J.2    McCown, P.J.3    Kumar, A.4
  • 19
    • 68249110928 scopus 로고    scopus 로고
    • Fungi pathogenic to humans: Molecular bases of virulence of Candida albicans, Cryptococcus neoformans and Aspergillus fumigatus
    • 19543556 1:CAS:528:DC%2BD1MXotlertrw%3D
    • Karkowska-Kuleta J, Rapala-Kozik M, Kozik A (2009) Fungi pathogenic to humans: molecular bases of virulence of Candida albicans, Cryptococcus neoformans and Aspergillus fumigatus. Acta Biochim Pol 56:211-224
    • (2009) Acta Biochim Pol , vol.56 , pp. 211-224
    • Karkowska-Kuleta, J.1    Rapala-Kozik, M.2    Kozik, A.3
  • 20
    • 0037205475 scopus 로고    scopus 로고
    • Multiple regulatory roles of a novel Saccharomyces cerevisiae protein, encoded by YOL002c, in lipid and phosphate metabolism
    • DOI 10.1074/jbc.M202045200
    • Karpichev IV, Cornivelli L, Small GM (2002) Multiple regulatory roles of a novel Saccharomyces cerevisiae protein, encoded by YOL002c, in lipid and phosphate metabolism. J Biol Chem 277:19609-19617 (Pubitemid 34967474)
    • (2002) Journal of Biological Chemistry , vol.277 , Issue.22 , pp. 19609-19617
    • Karpichev, I.V.1    Cornivelli, L.2    Small, G.M.3
  • 21
    • 0038349948 scopus 로고    scopus 로고
    • Sequencing and comparison of yeast species to identify genes and regulatory elements
    • DOI 10.1038/nature01644
    • Kellis M, Patterson N, Endrizzi M, Birren B, Lander ES (2003) Sequencing and comparison of yeast species to identify genes and regulatory elements. Nature 423:241-254 (Pubitemid 40852689)
    • (2003) Nature , vol.423 , Issue.6937 , pp. 241-254
    • Kellis, M.1    Patterson, N.2    Endrizzi, M.3    Birren, B.4    Lander, E.S.5
  • 22
    • 43549091398 scopus 로고    scopus 로고
    • Comparison of Saccharomyces cerevisiae strains of clinical and nonclinical origin by molecular typing and determination of putative virulence traits
    • DOI 10.1111/j.1567-1364.2008.00365.x
    • Klingberg TD, Lesnik U, Arneborg N, Raspor P, Jespersen L (2008) Comparison of Saccharomyces cerevisiae strains of clinical and nonclinical origin by molecular typing and determination of putative virulence traits. FEMS Yeast Res 8:631-640 (Pubitemid 351678647)
    • (2008) FEMS Yeast Research , vol.8 , Issue.4 , pp. 631-640
    • Klingberg, T.D.1    Lesnik, U.2    Arneborg, N.3    Raspor, P.4    Jespersen, L.5
  • 23
    • 27944509040 scopus 로고    scopus 로고
    • Novel G-protein-coupled receptor-like proteins in the plant pathogenic fungus Magnaporthe grisea
    • 15774025 10.1186/gb-2005-6-3-r24
    • Kulkarni RD, Thon MR, Pan H, Dean RA (2005) Novel G-protein-coupled receptor-like proteins in the plant pathogenic fungus Magnaporthe grisea. Genome Biol 6:R24
    • (2005) Genome Biol , vol.6 , pp. 24
    • Kulkarni, R.D.1    Thon, M.R.2    Pan, H.3    Dean, R.A.4
  • 25
    • 48349110912 scopus 로고    scopus 로고
    • Dissecting the regulation of yeast genes by the osmotin receptor
    • 18625204 1:CAS:528:DC%2BD1cXpslSqu78%3D 10.1016/j.bbrc.2008.07.002
    • Kupchak BR, Villa NY, Kulemina LV, Lyons TJ (2008) Dissecting the regulation of yeast genes by the osmotin receptor. Biochem Biophys Res Commun 374:210-213
    • (2008) Biochem Biophys Res Commun , vol.374 , pp. 210-213
    • Kupchak, B.R.1    Villa, N.Y.2    Kulemina, L.V.3    Lyons, T.J.4
  • 26
    • 0344256533 scopus 로고    scopus 로고
    • Phylogenetic circumscription of Saccharomyces, Kluyveromyces and other members of the Saccharomycetaceae, and the proposal of the new genera Lachancea, Nakaseomyces, Naumovia, Vanderwaltozyma and Zygotorulaspora
    • DOI 10.1016/S1567-1356(03)00175-2
    • Kurtzman CP (2003) Phylogenetic circumscription of Saccharomyces, Kluyveromyces and other members of the Saccharomycetaceae, and the proposal of the new genera Lachancea, Nakaseomyces, Naumovia, Vanderwaltozyma and Zygotorulaspora. FEMS Yeast Res 4:233-245 (Pubitemid 37494721)
    • (2003) FEMS Yeast Research , vol.4 , Issue.3 , pp. 233-245
    • Kurtzman, C.P.1
  • 27
    • 33646730081 scopus 로고    scopus 로고
    • G-protein and cAMP-mediated signaling in aspergilli: A genomic perspective
    • DOI 10.1016/j.fgb.2006.02.001, PII S108718450600034X
    • Lafon A, Han KH, Seo JA, Yu JH, d'Enfert C (2006) G-protein and cAMP-mediated signaling in aspergilli: a genomic perspective. Fungal Genet Biol 43:490-502 (Pubitemid 43744480)
    • (2006) Fungal Genetics and Biology , vol.43 , Issue.7 , pp. 490-502
    • Lafon, A.1    Han, K.-H.2    Seo, J.-A.3    Yu, J.-H.4    D'Enfert, C.5
  • 28
    • 80052293238 scopus 로고    scopus 로고
    • Microbe domestication and the identification of the wild genetic stock of lager-brewing yeast
    • 21873232 1:CAS:528:DC%2BC3MXhtFCltbbP 10.1073/pnas.1105430108
    • Libkind D, Hittingerb CT, Valériod E, Gonçalves C, Doverb J, Johnston M et al (2011) Microbe domestication and the identification of the wild genetic stock of lager-brewing yeast. Proc Natl Acad Sci USA 108:14539-14544
    • (2011) Proc Natl Acad Sci USA , vol.108 , pp. 14539-14544
    • Libkind, D.1    Hittingerb, C.T.2    Valériod, E.3    Gonçalves, C.4    Doverb, J.5    Johnston, M.6
  • 29
    • 33750088189 scopus 로고    scopus 로고
    • Loss of the flagellum happened only once in the fungal lineage: Phylogenetic structure of Kingdom Fungi inferred from RNA polymerase II subunit genes
    • DOI 10.1186/1471-2148-6-74
    • Liu YJ, Hodson MC, Hall BD (2006) Loss of the flagellum happened only once in the fungal lineage: phylogenetic structure of kingdom Fungi inferred from RNA polymerase II subunit genes. BMC Evol Biol 6:74 (Pubitemid 44574348)
    • (2006) BMC Evolutionary Biology , vol.6 , pp. 74
    • Liu, Y.J.1    Hodson, M.C.2    Hall, B.D.3
  • 31
    • 0034634395 scopus 로고    scopus 로고
    • The evolutionary fate and consequences of duplicate genes
    • 11073452 1:CAS:528:DC%2BD3cXotVChsb8%3D 10.1126/science.290.5494.1151
    • Lynch M, Conery JS (2000) The evolutionary fate and consequences of duplicate genes. Science 290:1151-1155
    • (2000) Science , vol.290 , pp. 1151-1155
    • Lynch, M.1    Conery, J.S.2
  • 33
    • 0242417617 scopus 로고    scopus 로고
    • Comparative evolutionary genomics unveils the molecular mechanism of reassignment of the CTG condon in Candida spp
    • DOI 10.1101/gr.811003
    • Massey SE, Moura G, Beltrao P, Almeida R, Garey JR, Tuite MF et al (2003) Comparative evolutionary genomics unveils the molecular mechanism of reassignment of the CTG codon in Candida spp. Genome Res 13:544-557 (Pubitemid 36511914)
    • (2003) Genome Research , vol.13 , Issue.4 , pp. 544-557
    • Massey, S.E.1    Moura, G.2    Beltrao, P.3    Almeida, R.4    Garey, J.R.5    Tuite, M.F.6    Santos, M.A.S.7
  • 37
    • 0029590749 scopus 로고
    • Molecular cloning of a novel macrophage maturation-associated transcript encoding a protein with several potential transmembrane domains
    • DOI 10.1006/bbrc.1995.2825
    • Rehli M, Krause SW, Schwarzfischer L, Kreutz M, Andreesen R (1995) Molecular cloning of a novel macrophage maturation-associated transcript encoding a protein with several potential transmembrane domains. Biochem Biophys Res Commun 217:661-667 (Pubitemid 26011760)
    • (1995) Biochemical and Biophysical Research Communications , vol.217 , Issue.2 , pp. 661-667
    • Rehli, M.1    Krause, S.W.2    Schwarzfischer, L.3    Kreutz, M.4    Andreesen, R.5
  • 38
    • 33645517864 scopus 로고    scopus 로고
    • Characterization of Bacteroides fragilis hemolysins and regulation and synergistic interactions of HlyA and HlyB
    • 16552061 1:CAS:528:DC%2BD28XjsVWhsb0%3D 10.1128/IAI.74.4.2304-2316.2006
    • Robertson KP, Smith CJ, Gough AM, Rocha ER (2006) Characterization of Bacteroides fragilis hemolysins and regulation and synergistic interactions of HlyA and HlyB. Infect Immun 74:2304-2316
    • (2006) Infect Immun , vol.74 , pp. 2304-2316
    • Robertson, K.P.1    Smith, C.J.2    Gough, A.M.3    Rocha, E.R.4
  • 40
    • 46749109126 scopus 로고    scopus 로고
    • Heterologous expression of human mPRα, mPRβ and mPRγ in yeast confirms their ability to function as membrane progesterone receptors
    • 18603275 1:CAS:528:DC%2BD1cXosVOnt7s%3D 10.1016/j.steroids.2008.05.003
    • Smith JL, Kupchak BR, Garitaonandia I, Hoang LK, Maina AS, Regalla LM et al (2008) Heterologous expression of human mPRα, mPRβ and mPRγ in yeast confirms their ability to function as membrane progesterone receptors. Steroids 73:1160-1173
    • (2008) Steroids , vol.73 , pp. 1160-1173
    • Smith, J.L.1    Kupchak, B.R.2    Garitaonandia, I.3    Hoang, L.K.4    Maina, A.S.5    Regalla, L.M.6
  • 42
    • 34247601439 scopus 로고    scopus 로고
    • Dating divergences in the Fungal Tree of Life: Review and new analyses
    • Taylor JW, Berbee ML (2006) Dating divergences in the fungal tree of life: review and new analyses. Mycologia 98:838-849 (Pubitemid 46683208)
    • (2006) Mycologia , vol.98 , Issue.6 , pp. 838-849
    • Taylor, J.W.1    Berbee, M.L.2
  • 43
    • 44449087557 scopus 로고    scopus 로고
    • Natamycin blocks fungal growth by binding specifically to ergosterol without permeabilizing the membrane
    • 18165687 1:CAS:528:DC%2BD1cXisFOksbc%3D 10.1074/jbc.M707821200
    • te Welscher YM, ten Napel HH, Balague MM, Souza CM, Riezman H, de Kruijff B et al (2008) Natamycin blocks fungal growth by binding specifically to ergosterol without permeabilizing the membrane. J Biol Chem 283:6393-6401
    • (2008) J Biol Chem , vol.283 , pp. 6393-6401
    • Te Welscher, Y.M.1    Ten Napel, H.H.2    Balague, M.M.3    Souza, C.M.4    Riezman, H.5    De Kruijff, B.6
  • 44
    • 11944260600 scopus 로고    scopus 로고
    • Phylogenetic analysis of the complete genome sequence of Encephalitozoon cuniculi supports the fungal origin of microsporidia and reveals a high frequency of fast-evolving genes
    • DOI 10.1007/s00239-004-2673-0
    • Thomarat F, Vivares CP, Gouy M (2004) Phylogenetic analysis of the complete genome sequence of Encephalitozoon cuniculi supports the fungal origin of microsporidia and reveals a high frequency of fast-evolving genes. J Mol Evol 59:780-791 (Pubitemid 40100874)
    • (2004) Journal of Molecular Evolution , vol.59 , Issue.6 , pp. 780-791
    • Thomarat, F.1    Vivares, C.P.2    Gouy, M.3
  • 45
    • 63849306201 scopus 로고    scopus 로고
    • Sphingolipids function as downstream effectors of a fungal PAQR
    • 19066337 1:CAS:528:DC%2BD1MXktVSlurc%3D 10.1124/mol.108.049809
    • Villa NY, Kupchak BR, Garitaonandia I, Smith JL, Alonso E, Alford C et al (2009) Sphingolipids function as downstream effectors of a fungal PAQR. Mol Pharmacol 75:866-875
    • (2009) Mol Pharmacol , vol.75 , pp. 866-875
    • Villa, N.Y.1    Kupchak, B.R.2    Garitaonandia, I.3    Smith, J.L.4    Alonso, E.5    Alford, C.6
  • 46
    • 0028676232 scopus 로고
    • New heterologous modules for classical or PCR-based gene disruptions in Saccharomyces cerevisiae
    • 7747518 1:CAS:528:DyaK2MXks1Kqt7Y%3D 10.1002/yea.320101310
    • Wach A, Brachat A, Pohlmann R, Philippsen P (1994) New heterologous modules for classical or PCR-based gene disruptions in Saccharomyces cerevisiae. Yeast 10:1793-1808
    • (1994) Yeast , vol.10 , pp. 1793-1808
    • Wach, A.1    Brachat, A.2    Pohlmann, R.3    Philippsen, P.4
  • 47
    • 0035031966 scopus 로고    scopus 로고
    • A general empirical model of protein evolution derived from multiple protein families using a maximum-likelihood approach
    • Whelan S, Goldman N (2001) A general empirical model of protein evolution derived from multiple protein families using a maximum-likelihood approach. Mol Biol Evol 18:691-699 (Pubitemid 32372940)
    • (2001) Molecular Biology and Evolution , vol.18 , Issue.5 , pp. 691-699
    • Whelan, S.1    Goldman, N.2
  • 50
    • 0344885580 scopus 로고    scopus 로고
    • Identification, classification, and partial characterization of genes in humans and other vertebrates homologous to a fish membrane progestin receptor
    • DOI 10.1073/pnas.0436133100
    • Zhu Y, Bond J, Thomas P (2003) Identification, classification, and partial characterization of genes in humans and other vertebrates homologous to a fish membrane progestin receptor. Proc Natl Acad Sci USA 100:2237-2242 (Pubitemid 36297483)
    • (2003) Proceedings of the National Academy of Sciences of the United States of America , vol.100 , Issue.5 , pp. 2237-2242
    • Zhu, Y.1    Bond, J.2    Thomas, P.3


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