Nonlinear optical properties of functionalized DNA-CTMA complexes

Nonlinear Optics Quantum Optics

Volumn 42, Issue 3-4, 2011, Pages 283-323

  Rau, Ileana ^a   Czaplicki, Robert ^b,f   Derkowska, Beata ^c   Grote, James G ^d   Kajzar, Francois ^a,b   Krupka, Oksana ^e   Sahraoui, Bouchta ^b  

^a UNIVERSITY POLITEHNICA OF BUCHAREST   (Romania)

^b UNIVERSITÉ D'ANGERS   (France)

^c NICOLAUS COPERNICUS UNIVERSITY   (Poland)

^d AIR FORCE RESEARCH LABORATORY   (United States)

^e TARAS SHEVCHENKO NATIONAL UNIVERSITY OF KYIV   (Ukraine)

^f TAMPERE UNIVERSITY OF TECHNOLOGY   (Finland)

Author keywords

Cobalt phthalocyanine; DFWM; DNA; DNA CTMA; DR1; Functionalized DNA CTMA; NLO properties; Nonlinear absorption; PCBM; Third harmonic generation

Indexed keywords

BIOPOLYMERS; CHARGE TRANSFER; CHROMOPHORES; COBALT; COBALT COMPOUNDS; DNA; DOPING (ADDITIVES); FOUR WAVE MIXING; HARMONIC GENERATION; NITROGEN COMPOUNDS; NUCLEIC ACIDS; OPTICAL PROPERTIES; SEMICONDUCTOR DOPING; ULTRAFAST LASERS;

COBALT PHTHALOCYANINE; DFWM; DNA-CTMA; FUNCTIONALIZED DNA-CTMA; NLO PROPERTIES; NONLINEAR ABSORPTIONS; PCBM;

NONLINEAR OPTICS;

EID: 84856032068     PISSN: 15430537     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (160)

1. Watson J.D. and Crick F.H. C, Molecular structure of nucleic acids. A structure for deoxyribose nucleic acid, Nature, 171, 737-738 (1953).
2. Crick F.H.C. and Watson J.D., The complementary structure of deoxyribonucleic acid. Proc. Royal Soc. (London), 223, 80-96 (1954).
3. Saenger W. Principles of Nucleic Acid Structure; Springer-Verlag, Berlin, 1987.
4. Dou X., Takama T., Yamaguchi Y., Hirai K., Yamamoto H., Doi S. and Ozaki Y., Quantitative Analysis of Double-Stranded DNA Amplified by a Polymerase Chain Reaction Employing Surface-Enhanced Raman Spectroscopy, Appl. Opt., 37, 759-763 (1998). (Pubitemid 128657310)
5. Asayama S., Maruyama A., Cho Ch.-S. and Akaike T., Design of Comb-Type Polyamine Copolymers for a Novel pH-Sensitive DNA Carrier, Bioconjugate Chem., 833-838 (1997). (Pubitemid 27526410)
6. Jacobsen J.P., Pedersen J.B. and Wemmer D.E., Site selective bis-intercalation of a homodimeric thiazole orange dye in DNA oligonucleotides, Nucleic Acid Research, 23, 753-760 (1995).
7. Hansen L.F., Jensen L.K. and Jacobsen J.P., Bis-intercalation of a homodimeric thiazole orange dye in DNA in symmetrical pyrimidine-pyrimidine- purine-purine oligonucleotides, Nucleic Acid Research, 24, 859-867 (1996). (Pubitemid 26076191)
8. Mirkin C.A., Bioinspired two-and three-dimensional nanostructures, J. Nanopart. Res., 2, 121-122 (2000).
9. Kimura H., Machida S., Hone K. and Okahata Y., Effect of Lipid Molecules on Twisting Motions of DNA Helix Studied by Fluorescence Polarization Anisotropy, Polymer J., 30, 708-712 (1998). (Pubitemid 128590755)
10. Watanuki A., Yoshida J., Kobayashi S., Ikeda H. and Ogata N., Optical and photochromic properties of spiropyran-doped marine-biopolymer DNA-surfactant complex films. Proc. SPIE, vol. 5724, 234-241 (2005). (Pubitemid 40953364)
11. Wang L., Zhang G., Horinouchi S., Yoshida J. and Ogata N., Optoelectronic materials derived from salmon deoxyribonucleic acid, Nonl. Opt., 24, 63-68 (2000). (Pubitemid 32296839)
12. Kawabe Y., Wang L., Koyama T., Horinouchi S. and Ogata N., Light amplification in dye doped DNA-surfactant complex films, Proc. SPIE, 4106, 369-376 (2000). (Pubitemid 32869686)
13. Kawabe Y., Wang L., Horinouchi S. and Ogata N., Amplified spontaneous emission from fluorescent dye-doped DNA-surfactant films, Adv. Mater. 12, 1281-1283 (2000).
14. Koyama T., Kawabe Y. and Ogata N., Electroluminescence as a probe for electrical and optical properties of deoxyribonucleic acid, Proc. SPIE, 4464, 248-255 (2002). (Pubitemid 35152551)
15. Wang L., Yoshida J., Ogata N., Sasaki S. and Kamiyama T., Self-assembled supramolecular films derived from marine deoxyribonucleic acid (DNA) -cationic surfactant complexes: Large-scale preparation and optical and thermal properties, Chem. Mater., 13, 1273-1281 (2001). (Pubitemid 32830786)
16. Wang L., Fukushima M., Yoshida J. and Ogata N., A novel photochromic film materials derived from supramolecules, DNA-surfactant complex: Spiropyran-DNA-CTMA complex, Nanotechnology toward theorganic photonics, GooTech Ltd., Chitose-shi, Japan, pp. 379-384 (2002).
17. Yoshida J., Wang L., Kobayashi S., Zhang G., Ikeda H. and Ogata N., Optical properties of photochromic-compound-doped marine-biopolymer DNA-surfactant complex films for switching applications, Proc. SPIE, 5351, 260 (2004).
18. Wang L., Ishihara K., Izumi H., Wada M., Zhang G., Ishikawa T., Watanabe A., Horinouchi S. and Ogata N., Strongly luminescent rare-earth ion-doped DNA-CTMA complex film and fiber materials, Proc. SPIE, vol. 4905, 143-152 (2002).
19. Fink H.-W., Schmid H., Ermantraut E. and Schulz T., Electron holography of individual DNA molecules, J. Opt. Soc. Am. A 14, 2168 (1997).
20. Wagenknecht H. -A., Ladungstransferprozesse durch die DNA, Chemie in unserer Zeit, 36, 318-330 (2002).
21. Tang L., Sun Z., Guo J., and Wang Z., Chinese Opt. Letters, 4, 101 (2006).
22. Zhang G., Takahashi H., Wang L., Yoshida J., Kobayashi S., Horinouchi S. and Ogata N. Nonlinear Optical Materials Derived from Biopolymer (DNA)-surfactant-Azo dye complex, Proc. SPIE, 4905, 375-380 (2002). (Pubitemid 35467531)
23. Grote J.G., Ogata N., D.E. Diggs and F.K. Hopkins, Deoxyribonucleic acid (DNA) cladding layers for nonlinear-optic-polymer-based electro-optic devices, Proc. SPIE, 4991, 621 (2003).
24. Samoc A., Samoc M., Grote J.G., Miniewicz A., Luther-Davies B., Optical properties of deoxyribonucleic acid (DNA) polymer host, Proc. SPIE, 6401, 640106-1-640106-1-(2006).
25. Gupta, P. Markowicz P., Baba K., O'Reilly J., Samoc M., Prasad P.N. and Grote J.G., DNA-Ormocer based biocomposite for fabrication of photonic structures. Appl. Phys. Lett., 88, 213109-1-3 (2006).
26. Steckl A.J., DNA -A New Material for Photonics?, Nature Photonics, 1, 3-4 (2006).
27. Knoesen A., Second order optical nonlinearity in single and triple helical protein supramolecular assemblies. Nonlinear Optics, Quantum Optics: Concepts in Modern Optics, 38(3-4), 213-225 (2009).
28. Klein Yamaoka K., Fukudome K. and Matsuda K., J. Phys. Chem., 96, 7131-7136 (1992).
29. Yamaoka K., Fukudome K. and Matsuda K., Electric Field Orientation of Nucleic Acids in Aqueous Solutions. 3. Non-Kerr-Law Behaviour of High Molecular Weight DNA at Weak Fields As Revealed by Electric Birefringence and Electric Dichroism, J. Phys. Chem., 96, 7131-7136 (1992).
30. Shen Y.R. The principles of nonlinear optics; New York: Wiley, 2003.
31. Davis J.M., Heckman L.M., Stepp B.R., Nguyen S.T. and Franz M. Geiger F.M., DNA at Aqueous/Solid Interfaces: Chirality-Based Detection via Second Harmonic Generation Activity, J. Am. Chem. Soc., 844-848 (2009).
32. Boman F.C., Gibbs-131(2), pp 844 -(2009).
33. Zhuang Zheng-Fei1, Liu Han-Ping1, Guo Zhou-Yi1, Zhuo Shuang-Mu, Yu Bi-Ying and Deng Xiao-Yuan, Second-harmonic generation as a DNA malignancy indicator of prostate glandular epithelial cells, Chinese Phys. B, 19(5), 4950 (2010).
34. Williamson W., Wang Y., Lee S.A., Simon H.J. and Rupprecht A., Observation of optical second harmonic generation in wet-spun films of Na-DNA, Spectrosc. Lett., 26(5), 849-858 (1993).
35. Sioncke S., Verbiest T. and Persoons A., Second-order nonlinear optical properties of chiral materials, Mat. Sc. Engin., R 42, 115-155 (2003).
36. Yamada Satoru, Nakano Masayoshi, Kishi Ryohei, Nakagawa Nozomi, Nitta Tomoshige and Yamaguchi Kizashi, Theoretical study on nonlinear optical (NLO) properties of modified guanine bases having a NLO group, Nippon Kagakkai Koen Yokoshu, 85(1), 302 (2005).
37. Pörschke D., in Molecular electro-optic properties of Macromolecules and colloids in solution, S. Krause Ed., Plenum Press, New York 1981.
38. Yamaoka K. and Fukudome K., J. Phys. Chem., 96, 4994-5001 (1988).
39. Ibidem 94, 6896-6903 (1990).
40. Yamaoka K., Fukudome K. and Matsuda K., J. Phys. Chem., 92, 7131-7136 (1992).
41. O'Konski C.T. and Stellwagen N.C., Biophys.J., 5, 607-613 (1965).
42. Pörschke D.,Nucl. Acids Res., 1, 1601 (1974).
43. Neumann E., Werner E., Spratke A. and Krüger K., in Colloid and Molecular Electro-Optics, B.R. Jennings and S.P. Stoyov Eds, Institute of Physics Publ., Bristol 1993.
44. Large M.C.J., Blau W., Croke D.T., McWilliam P. and Kajzar F., Application of Nonlinear Optical Techniques to the Study of Biological Molecules, Nonl. Opt., 15, 463(1996).
45. Large M.C.J., Croke D.T., Blau W.J., McWilliam P.and Kajzar,F., EFISH in electrolyte and polyelectrolyte systems, Mol. Cryst. Liq. Cryst,. Sc. & Technol., Section B: Nonl. Opt., 12(3), 225-238 (1995).
46. Large M., Croke D.T., Blau W., McWilliam P. and Kajzar F., Molecular Length Dependent Type Polarizability, in Nonlinear Optical Properties of Organic Molecules IX, G. Möhlmann Ed., Proc. SPIE, vol. 2852, 36 (1996).
47. Samoc M., Samoc A. and Grote J.G., Complex nonlinear refractive index of DNA, Chem. Phys. Lett., 431(1-3), 132-134 (2006). (Pubitemid 44632997)
48. Ijiro K. and Okahata Y., A DNA-lipid complex soluble in organic solvents J. Chem. Soc., Chem. Commun, 18, 1339-1341 (1992).
49. Tanaka, K. and Okahata, Y.J. A DNA-Lipid Complex in Organic Media and Formation of an Aligned Cast Film, J. Am. Chem. Soc., 118(44), 10679-10683 (1996). (Pubitemid 26389993)
50. Hoshino Yu, Nakayama H. And Okahata, Y.J. Preparations of a RNA-lipid complex film and its physical properties, Nucleic Acids Res. Suppl. No. 1, 61-62 (2001).
51. Sergeyev V.G., Pyshkina O.A., Lezov A.V., Mel'nikov A.B., Ryumtsev E.I., Zezin A.B. and Kabanov V. A, DNA Complexed with Oppositely Charged Amphiphile in Low-Polar Organic Solvents, Langmuir, 15, 4434-4440 (1999).
52. Hagen J., Grote J., Ogata N., Zetts J., Nelson R., Diggs D., Hopkins F., Yaney P., Dalton L. and Clarson S., DNA photonics, Proc. SPIE, 5351, 77-86, (2004).
53. Grote J., Ogata N., Diggs D. and Hopkins F., Deoxyribonucleic acid (DNA) cladding layers for nonlinear-optic-polymer-based electro-optic devices, Proc. SPIE, 4991, 621-625 (2003).
54. Yaney P., Heckman E., Davis A., Hagen J., Bartsch C., Subramanyam G., Grote J. and, Hopkins F., Characterization of NLO polymer materials for optical waveguide structures, Proc. SPIE, 6117, 0W1-0W14 (2006).
55. Samoc A., Samoc M., Grote J.G., Miniewicz A. and Luther-Davies B., Optical properties of deoxyribonucleic acid (DNA) polymer host, Proc. SPIE, 6401, 6401-1-6(2006).
56. Heckman E., Yaney P., Grote J. and Hopkins F., Poling and optical studies of DNA NLO waveguides, Proc. SPIE, 5934, pp. 0810-087 (2005).
57. Heckman E.M., Grote J.G., Yaney P.P., and Hopkins K.F., DNA-based nonlinear photonic materials, Proc. SPIE, 5516, 47 (2004); doi:10.1117/12. 563071. (Pubitemid 40184198)
58. Heckman E., Yaney P., Grote J., Hopkins F. and Tomczak M., Development of an all-DNA-surfactant electro-optic modulator, Proc. SPIE, 6117, 0K1-0K7 (2006).
59. Heckman E.M., Yaney P.P., Grote J.G. and Hopkins K.F., Microwave, Development and performance of an all-DNA-based electro-optic waveguide modulator, Proc. SPIE, 6401, 64010-1640108-10 (2006).
60. Heckman E., Grote J., Hopkins F. and Yaney P., Performance of an electro-optic waveguide modulator fabricated using a deoxyribonucleic-acid-based biopolymer, Appl. Phys. Lett., 89, 181116 (2006).
61. Yaney P.P., Heckman E.M. and Grote J.G., Proc. SPIE, 6646, 664601 (2007).
62. Vasilenko L.S., Chebotae V.P. and Y. Troitski Y.V., Visual observation of infrared laser emission, Soviet Physics JETP, 21(3), 513 (1965).
63. Fine S. and Hansen W.P., Optical second harmonic generation in biological systems, Appl. Opt., 10(10), 2350-2353 (1971).
64. Campagnola P.J., Millard A.C., Terasaki M., Hoppe P.E., Malone C.J. and Mohler W.A.,Three-dimensional high-resolution second-harmonic generation imaging of endogenous s structural proteins in biological tissues. Biophys.J., 82(1), 493-508 (2002). (Pubitemid 34289822)
65. Kim B.M., Eichler J. and Silva L.B. Da, Frequency doubling of ultrashort laser pulses in biological tissues, Appl. Opt., 38(34), 7145-7150 (1999). (Pubitemid 129646729)
66. Guo Y.C., Ho P.P., Savage H., Harris D., Sacks P., Schantz S., Liu F., Zhadin N. and Alfano R.R., Second-harmonic tomography of tissues. Opt. Lett., 22(17), 1323-1325 (1997). (Pubitemid 127562111)
67. Cox G., Moreno N. and Feijo J., Second-harmonic imaging of plant polysaccharides, J Biomed. Opt, 10(2), 024013 (2005).
68. Mizutani G., Sonoda Y., Sano H., Sakamoto M., Takahashi T. and Ushioda S., Detection of starch granules in a living plant by optical second harmonic microscopy, Journal of Luminescence, 87(9), 824-826 (2000).
69. Chu S.W., Chen I.H., Liu T.M., Chen P.C., Sun C.K. and Lin B.L., Multimodal nonlinear spectral microscopy based on a femtosecond cr:forsterite laser. Opt Lett, 26(23), 1909-11 (2001). (Pubitemid 33693141)
70. Chu S.W., Chen I.H., Liu T.M., Sun C.K., Lee S.P., Lin B.L., Cheng P.C., Kuo M.X., Lin D.J. and Liu H.L., Nonlinear bio-photonic crystal effects revealed with multimodal nonlinear microscopy.J. Microsc.-Oxford, 208, 190-200 (2002).
71. Hirakawa, Tani S., Erata T., M. Takai M. and Kawamata J., Second harmonic generation measurements for biomacromolecules: Celluloses, Opt. Rev., 11(6), 385-387 (2004). (Pubitemid 41310293)
72. Jr. Brown, R.M., Millard A.C. and Campagnola P.J., Macromolecular structure of cellulose studied by second-harmonic generation imaging microscopy. Opt Lett, 28(22), 2207-2209 (2003).
73. Nadiarnykh O., Lacomb R.B., Campagnola P.J. and Mohler W.A., Coherent and incoherent second harmonic generation in fibrillar cellulose matrices. Opt Express, 15(6), 3348-3360 (2007). (Pubitemid 46457198)
74. Olivier N., Aptel F., Plamann K., Schanne-Klein M.-C. and Beaurepaire E., Opt. Exp., 18, 5028-5040 (2010).
75. Knoesen A., Second order optical nonlinearity in single and triple helical protein supramolecular assemblies. Nonlinear Optics, Quantum Optics: Concepts in Modern Optics, 38(3-4): 213-225 (2009).
76. Aptel F., Olivier N., Deniset-Besseau A., Legeais J.M., Plamann K., Schanne-Klein M.C. and Beaurepaire E., Multimodal nonlinear imaging of the human cornea, Investigative ophthalmology & visual science, 51(5), 2459-2465 (2010).
77. Deniset-Besseau, A., Strupler, M., Duboissetb, J., De Sa Peixoto, P., Benichou, E., Fligny, C., Tharaux, P.L. and Schanne-Klein, M.C., Concepts to build nonlinear optical biomaterials in a bottom-up approach, Proc. SPIE, 7487, art. no. 74870D-0 (2009).
78. Carriles R., Schafer D.N., Sheetz K.E., Field J.J., Cisek R., Barzda V., Sylvester W.A. and Squier J.A., Imaging techniques for harmonic and multiphoton absorption fluorescence microscopy. Rev. Scient. Instr., 80(8), 081101-081123 (2009).
79. Brown E., Mckee T., Ditomaso E., Pluen A., Seed B., Boucher Y. and Jain R.K., Dynamic imaging of collagen and its modulation in tumors in vivo using second-harmonic generation, Nat. Med. 9, 796-800 (2003). (Pubitemid 36749232)
80. Cox G, Kable E., Jones A., Fraser I., Marconi K. and Gorrell M.D., 3-dimensional imaging of collagen using second harmonic generation, J. Struct. Biol., 141, 53-62 (2003). (Pubitemid 36269106)
81. Strupler M., Pena A.-M., Hernest M., Tharaux P.-L., Marti, J.-L., Beaurepaire E. and Schanne-Klein M.-C., Second harmonic imaging and scoring of collagen in fibrotic tissues, Optics Express 15(7), 4054-4065 (2007). (Pubitemid 46562398)
82. Strupler M., Pena A.-M., Hernest M., Tharaux P.-L., Fabre A., Marchal-Somme J., Crestani B. and Schanne-Klein M.-C., Nonlinear microscopy of collagen fibers, Proc. SPIE, vol. 6470, art. no. 647005 (2007).
83. Duboisset J., Matar G., Deniset-Besseau A., Schanne-Klein M.-C., Besson F., Benichou E. and Brevet P.-F., Concepts to build nonlinear optical biomaterials in a bottom-up approach, Proc. SPIE, 7487, art. no. 74870D-0 (2009).
84. Latour G. and Schanne-Klein M.-C., Polarization-resolved Second Harmonic microscopy in anisotropic thick tissues, Optics Express, 18(18), 19339-19352 (2010).
85. Le Floc'h V., Brasselet S., Zyss J., Chao R., Lee S.H., Jeon S.J., Cho M., Min K.S., Suh M.P., High efficiency and quadratic optical properties of a fully optimized 2D octupolar crystal by nonlinear microscopy. Adv. Mater. 17(2), 196-200 (2005). (Pubitemid 40242473)
86. Cox G., Moreno N. and Feijo J., Second-harmonic imaging of plant polysaccharides, J. Biomed. Opt, 10(2), 024013 (2005).
87. Mojzisova H., Olesiak J., Zielinski M., Matczyszyn K., Chauvat D. and Zyss J., Polarization-Sensitive Two-Photon Microscopy Study of the Organization of Liquid-Crystalline DNA, Biophys.J., 97, 2348-2357 (2009).
88. Hajj B., De Reguardati S., Hugonin L. Le Pioufle B., Osaki T., Suzuki H., Takeuchi S., Mojzisova H., Dominique Chauvat D. and Zyss J., Electro-Optical Imaging Microscopy of Dye-Doped Artificial Lipidic Membranes, Biophys.J., 97, 1-9 (2009).
89. Yelin D. and Silberberg Y. Laser scanning third-harmonic-generation microscopy in biology. Optics Express, 5(8), 169-175 (1999).
90. Muller M., Squier J., Wilson K.R. and Brakenhoff G.J., Three dimensional microscopy of transparent objects using third-harmonic generation.J. Microsc., 191(3): 266-274 (1998). (Pubitemid 28432616)
91. Débarre, D., Supatto, W., Farge, E., Moulia, B., Schanne-Klein, M.-C., Beaurepaire, E., Velocimetric third-harmonic generation microscopy: Micrometer-scale quantification of morphogenetic movements in unstained embryos, Opt. Lett., 29(24), 2881-2883 (2004). (Pubitemid 40011255)
92. Débarre, D., Pena, A.-M., Supatto, W., Boulesteix, T., Strupler, M., Sauviat, M.-P., Martin, J.-L., Beaurepaire, E,. [Microscopies multiharmoniques pour l'imagerie structurale de tissus intacts], Medecine/Sciences, 22(10), 845-850 (2006). (Pubitemid 44580651)
93. Débarre, D., Supatto, W., Pena, A.-M., Fabre, A., Tordjmann, T., Combettes, L., Schanne-Klein, M.-C., Beaurepaire E.,Imaging lipid bodies in cells and tissues using third-harmonic generation microscopy, Nature Methods, 3(1), 47-53 (2006). (Pubitemid 43135349)
94. Mesnil A., Schanne-Klein M.C., Hache F., Alexandre M, Lemercier G. and Andraud C., Experimental observation of nonlinear circular dichroism in a pump-probe experiment, Chem. Phys. Lett., 338, 269-276 (2001). (Pubitemid 33630730)
95. Pena, A.-M., Boulesteix, T., Dartigalongue, T., Strupler, M., Beaurepaire, E., Schanne-Klein, M.-C., Chiroptical effects in the second harmonic generation from collagens I and IV: Applications in nonlinear microscopy, Nonl. Opt. Quant. Opt., 35(1-3), 235-240 (2006). (Pubitemid 46112704)
96. Hernest M., Pena A.M., Strupler M., Beaurepaire E., Martin J.L., Schanne-Klein M.C. and Tharaux P.L. Nouvelle approche des fibroses par microscopie multiphotonique avec génération de second harmonique, Médecine sciences : M/S, 22(10), 820-821 (2006).
97. Carriles R., Schafer D.N., Sheetz K.E., Field J.J., Cisek R., Barzda V., Sylvester A.W. and Squier J.A., Imaging techniques for harmonic and multiphoton absorption fluorescence microscopy, Rev. Sc. Instr., 80(8) (2009).
98. Chen S.Y. , Hsieh C.S., Chu S.W., Lin C.Y., Ko C.Y., Chen Y.C., Tsai H.J., Hu C.H. and Sun, C.K., Noninvasive harmonics optical microscopy for long-term observation of embryonic nervous system development in vivo.J. Biomed. Opt, 11(5): 054022 (2006).
99. Knoesen A., Pakalnis S., Wang M., Wise W.D., Lee N. and Frank C.W., Sum frequency spectroscopy and imaging of aligned helical polypeptides. IEEE J. Select. Topics in Quant. Electron., 10(5), 1154-1163 (2004). (Pubitemid 40010791)
100. Mizutani G., Koyama , S. Tomizawa S. and Sano H, Distinction between some saccharides in scattered optical sum frequency intensity images. Spectrochim. Acta, Part A, 62, 845-849 (2005). (Pubitemid 41662315)
101. Rocha-Mendoza I, Yankelevich D.R., Wang M., Reiser K.M., Frank C.W. and Knoesen A., Sum frequency vibrational spectroscopy: The molecular origins of the optical secondorder nonlinearity of collagen, Biophys.J., 93(12): 4433-44 (2007). (Pubitemid 350294489)
102. Duboisset, J., Matar, G., Russier-Antoine, I., Benichou, E., Bachelier, G., Jonin, Ch., Ficheux, D., Brevet, P.F., First hyperpolarizability of the natural aromatic amino acids tryptophan, tyrosine, and phenylalanine and the tripeptide lysine-tryptophan-lysine determined by hyper-Rayleigh scattering, J. Phys. Chem. B, 114 (43), pp. 13861-13865 (2010).
103. Deniset-Besseau A., Duboisse J., Benkhou E., Hache F., Brevet P.-F., Schanne-Klein M.-C., Measurement of the quadratic hyperpolarizability of the collagen triple helix and application to second harmonic imaging of natural and biomimetic collagenous tissues, J. Phys. Chem. B, 113(40), 13437-13445 (2009).
104. Deniset-Besseau, A., Strupler, M., Duboisset, J., De Sa Peixoto, P., Benichou, E., Fligny, C., Tharaux, P.L., Schanne-Klein, M.C. , Measurement of the quadratic hyperpolarizability of the collagen triple helix and application to second harmonic imaging of natural and biomimetic collagenous tissues, Proc. SPIE, 7487, art. no. 74870E (2009).
105. Knoesen A., Pakalnis S., Wang M., Wise W.D., Lee N. and Frank C.W., Sumfrequency spectroscopy and imaging of aligned helical polypeptides. IEEE Journal of Selected Topics in Quantum Electronics, 10(5), 1154-1163 (2004). (Pubitemid 40010791)
106. Mizutani G., Koyama T., Tomizawa S., and Sano H., Distinction between some saccharides in scattered optical sum frequency intensity images. Spectrochimica Acta Part A, 62, 845-849 (2005). (Pubitemid 41662315)
107. Rocha-Mendoza I., Yankelevich D.R., Wang M., Reiser K.M., Frank C.W. and Knoesen A Sum frequency vibrational spectroscopy: The molecular origins of the optical secondorder nonlinearity of collagen, Biophys J, 93(12), 4433-4444 (2007). (Pubitemid 350294489)
108. Reiser K. and Knoesen A., Parametric Nonlinearity in Plant Polysaccharides: A New Harvest, Nonl. Opt. Quant. Opt., this issue.
109. Grote J.G., Hagen J.A., Zetts J.S., Nelson R.L., Diggs D.E., Stone M.O., Yaney P.P., Heckman E., Zhang C., Steier W.H., Jen A.K.-Y., Dalton L.R., Ogata N., Curley M.J., Clarson S.J. and Hopkins F.K., J. Phys. Chem. B, 108, 8584 (2004).
110. Heckman E., Hagen J., P. Yaney, J. Grote and F. Hopkins, Processing techniques for deoxyribonucleic acid: Biopolymer for photonics applications , Appl. Phys. Lett. 87, 211115 (2005).
111. Kajzar F., Impact of Dimensionality, Conjugation Length, Scaling Laws and Electronic Structure on Nonlinear Optical Properties of Conjugated Polymers, Nonl. Optics, 5, 329-338 (1993).
112. D.R. Tackley, G. Dent and W.E. Smith, Phthalocyanines: Structure and vibrations, Phys. Chem. Chem. Phys. 3, 1419-1426 (2001). (Pubitemid 32511001)
113. Senthilarasu S., Sathyamoorthy R., Lalitha S., Subbarayan A. and Natarajan K. Thermally evaporated ZnPc thin films-band gap dependence on thickness, Sol. Energy Mater. Sol. Cells, 82, 179-186 (2004).
114. El-Nahass M.M., Zeyada H.M., Azis M.S. and El-Ghamaz N.A., Structural and optical properties of thermally evaporated zinc phthalocyanine thin films Opt. Mat. 27, 491-498 (2004).
115. Leznoff C.C. and Lever A.B.P., Phthalocyanines, Properties and Applications, VCH Publishers, Inc. (1989).
116. Derkowska B. Wojdyla M., Czaplicki R., Sofiani Z., Bala W. and Sahraoui B., Influence of the centralmetal atom on the nonlinear optical properties of MPcs solutions and thin films, Opt. Commun., 274(1), 206-212 (2007). (Pubitemid 46550540)
117. Wojdyla M., Rebarz M., Dalasinski P., Bala W., Lukasiak Z., Derkowska B. and B. Sahraoui, B. Optical properties of metallophthalocyanines, Alq3 and perylene derivatives investigated by photoluminescence, absorption, reflection, and photomodulated spectroscopy, in Trends In Optical Materials Research, chapter 1, pp. 1-54, Editor: Owen G. Gardens, Nova Science Publisher Inc. 2006.
118. Tutt L.W. and Boggess T.F., A review of optical limiting mechanisms and devices using organics, fullerenes, semiconductors and other materials, Prog. Quant. Electron., 17, 299-338 (1993).
119. Swalen J.D. and Kajzar F., Nonlinear Absorption in Optical Limiting, Nonl. Optics, 27, 13-32 (2001).
120. Li C., Zhang L., Yang M., Wang H. and Wag Y., Dynamic and steady-state behaviors of reverse saturable absorption in metallophthalocyanine, Phys. Rev. A, 49, 1149-1157 (1994).
121. Derkowska B., Jaworowicz K., Krupka O., Karpierz M., Wojdyla M., Bala, W. Kajzar F. and Sahraoui B., Influence of different peripheral substituents on the nonlinear optical properties of cobalt phthalocyanine core, J. Appl. Phys., 101, 083112(1-8) ( 2007).
122. Kajzar F. and Messier J., Third harmonic generation in liquids, Phys. Rev. A, 32, 2352-2363(1985).
123. Kajzar F., Messier J. and Rosilio C., Nonlinear Optical Properties of Thin Films of Polysilane, J. Appl. Phys., 60, 3040-3044 (1986).
124. Kajzar F., Third Harmonic Generation, in Characterization Techniques and Tabulations for Organic Nonlinear Optical Materials, M. Kuzyk and C. Dirk, Eds. Marcel Dekker, Inc., New York 1998, pp. 767-839.
125. Grote J.G., Ogata N., Hagen J., Heckman E., Yaneyn P., Stone M., Diggs D., Nelson R., Zetts J., Hopkins F. and Dalton L.,DNA photonics [deoxyribonucleic acid], Mol. Cryst. Liq. Cryst, 426, 3-17 (2005). (Pubitemid 41663119)
126. U. Gubler and C. Bosshard, Optical third-harmonic generation of fused silica in gas atmosphere: Absolute value of the third-order nonlinear susceptibility ?(3), Phys Rev. B, 61, 10702-10710 (2000).
127. Buchalter B. and Meredith G.R., Third-order optical susceptibility of glasses determined by third harmonic generation, Appl. Opt., 21, 3221 (1982).
128. Morichere D., Dumont M., Levy Y., Gadret G. and Kajzar F., Nonlinear properties of poled polymer films: SHG and electrooptic measurements, Proc. SPIE, 1560, 214 ((1991).
129. Popescu R., Pîrvu C., Moldoveanu M., Grote J.G., Kajzar F., Rau I., Biopolymer thin films for optoelectronics applications, Mol. Cryst. Liq. Cryst., 522, 229-237 (2010).
130. Derkowska B., in James L. Davies and Daniel A. Hall (Eds.), Nonlinear Optics Research
131. Derkowska B., Mulatier J.C., Fuks I., Sahraoui B., Nguyen Phu X. and Andraud C., Third order optical nonlinearities in new octopolar molecules and their dipolar subunits, J. Opt. Soc. Am. B, 18, 610-616 (2001). (Pubitemid 33269817)
132. Mysliwiec J., Miniewicz A., Rau I., Krupka O., Sahraoui B., Kajzar F. and Grote J., Biopolymer-based material for optical phase conjugation, J. Optoel. Adv. Mat., 10(8), 2146-2150 (2008).
133. Kajzar F., Charra F., Nunzi J.M., Raimond P., Idiart E. and Zagorska M.,Third Order Nonlinear Optical Properties of Functionalized Polymers, in Frontiers of Polymers and Advanced Materials, P.N. Prasad Ed., Plenum Press, New York 1994, p. 141.
134. Rodríguez A., Vitrant G., Chollet P.A. and Kajzar F., Optical control of an integrated interferometer using a photochromic polymer, Appl. Phys. Lett., 79, 461-3 (2001). (Pubitemid 33606793)
135. Sheik-Bahae M., Said A.A., Wei T.H., Hagan D. and Van Stryland E.W. Sensitive measurement of optical nonlinearities using a single beam, IEEE J. Quantum Electron. 26, 760-769 (1990). (Pubitemid 20714175)
136. Rau I., Kajzar F., Luc J., Sahraoui B. and Boudebs G., Comparison of Z-scan and THG derived nonlinear index of refraction in selected organic solvents, J. Opt. Soc. Am. B, 25, No. 10, 1738-47 (2008).
137. London R., The Quantum Theoryt of Light, Oxford Univ. Press, London 1973.
138. Moldoveanu M., Meghea A., Popescu R., Grote J.G., Kajzar F. and Rau I., On the stability and degradation of DNA based thin films, Mol. Cryst. Liq. Cryst., 522, 180/[480]-190/ [490] (2010).
139. Pawlik G., Mitus A.C., Mysliwiec J., Miniewicz A. and Grote J.G., Photochromic dye semi-intercalation into DNA-based polymeric matrix: Computer modeling and experiment, Chem. Phys. Lett., 484, 321 (2010).
140. Miniewicz A., Kochalska A., Mysliwiec J., Samoc A., Samoc M. and Grote J.G., Deoxyribonucleic acid-based photochromic material for fast dynamic holography, Appl. Phys. Lett., 91, 04118 (2007).
141. Derkowska B., Krupka O., Smokal V. and Sahraoui B., Optical properties of oxazalone derivatives with and without DNA-CTMA, Opt. Mat., in press (2011), http://dx.doi. org/10.1016/j.optmat.2011.02.037.
142. Mysliwiec J., Ziemienczuk M. and Miniewicz A., Pulsed laser induced birefringence switching in a biopolymer matrix containing azo-dye molecules, Opt. Mat., in print, doi:10.1016/j.optmat.2011.02.034.
143. Nakamura K., Ishikawa T., Nishioka D., Ushikubo T. and Kobayashi N., Color-tunable multilayer organic light emitting diode composed of DNA complex and tris 8-hydroxyquinolinato aluminium, Appl. Phys. Lett., 97, 193301-193303 (2010).
144. Kobayashi N., Bioled with DNA/conducting polymer complex as active layer, Nonl. Opt. Quant. Opt., this issue.
145. Kawabe Y., Wang L., Nakamura T. and Ogata N., Thin-film lasers based on dye-deoxyribonucleic acid-lipid complexes. Appl. Phys. Lett. 81, 1372-1374 (2002).
146. Kawabe Y., Wang L., Horinouchi S. and Ogata, N. Amplified spontaneous emission from fluorescent dye-doped DNA-surfactant films. Adv. Mater. 12, 1281-1283 (2000).
147. Leonetti M., Sapienza R., Ibisate M., Conti C. and López C., Optical gain in DNA-DCM for lasing in photonic materials, Opt. Lett., 34(24), 3764-3766 (2009), doi:10.1364/ OL.34.003764.
148. Kawabe, Y., Wang, L., Koyama, T., Horinouchi, S., Ogata N., Light amplification in dye doped DNA-surfactant complex films. Proc. SPIE, 4106, 369-376 (2000). (Pubitemid 32869686)
149. Mysliwiec J., Sznitko L., Bartkiewicz S., Miniewicz A., Essaidi Z., Kajzar F. and Sahraoui B., Amplified spontaneous emission in the spiropyran-biopolymer based system, Appl. Phys. Lett. 94, 2411061-3(2009).
150. Mysliwiec J., Sznitko L., Miniewicz A., Kajzar F. and Sahraoui B., Study of the amplified spontaneous emission in a dye-doped biopolymer-based material, J. Phys. D: Appl. Phys., 42(8), 085101 (2009).
151. He G.S., Zheng Q., Prasad P.N., Grote J.G., Hopkins F.K. Infrared two-photon-excited visible lasing from a DNA-surfactant-chromophore complex. Opt. Lett., 31, 359-361 (2006).
152. Gupta, P., Markowicz, P.P., Baba, K., O'Reilly, J., Samoc, M., Prasad, P.N., Grote, J.G., DNA-Ormocer based biocomposite for fabrication of photonic structures. Appl. Phys. Lett., 88, 213109-1-3 (2006).
153. Pawlicka A., Firmino A., Vieira D., Sentanin F., Grote J.G., Kajzar F., Gelatin-and DNAbased ionic conducting membranes for electrochromic devices, Proc. SPIE -The International Society for Optical Engineering, 7487, 74870J (2009).
154. Firmino A., Grote J.G., Kajzar F., Rau I. and Pawlicka A., Application of DNA electrochromic cells with switchable transmission; Nonl. Opt. Quant. Opt., this issue.
155. Subramanyam G., Bartsch C.M., Grote J.G., Naik R.R., Brott L., Stone M., Campbell A., Effect of external electrical stimuli on DNA based biopolymers, NANO, vol. 4, no. 2, pp. 1-8 (2009).
156. Yaney P., Heckman E., Diggs D., Hopkins F. and Grote J, Development of chemical sensors using polymer optical waveguides fabricated with DNA, Proc. SPIE 5724, pp. 224-233, 2005. (Pubitemid 40953363)
157. Sznitko L., Mysliwiec J., Karpinski P., Palewska K., Parafiniuk K., Bartkiewicz S., Rau I. Kajzar,F. and Miniewicz A., Biopolymer based system doped with nonlinear optical dye as a medium for amplified spontaneous emission and lasing, Appl. Phys. Lett. 99(3), 031107 (2011).
158. Czaplicki R., Krupka O., Essaidi Z., El-Ghayoury A., Kajzar F., Grote J.G. and Sahraoui B., Grating inscription in picosecond regime in thin films of functionalized DNA, Opt. Express, 15, 15268-15273 (2007). (Pubitemid 350127641)
159. Rau I., Krupka O., Grote J.G., Kajzar, F. and Sahraoui B. Nonlinear optical properties of functionalized DNA, J. Comp. Met. Sc. Eng., 10(3-6), 531-543 (2010).
160. Heckman E.M., Grote J.G., Yaney P. and Hopkins F.K., DNA-based nonlinear photonic materials, Proc. SPIE 5516, 47 (2004); doi:10.1117/12.563071. (Pubitemid 40184198)