메뉴 건너뛰기




Volumn 194, Issue 2, 2012, Pages 209-217

Novel roles of soxR, a transcriptional regulator from Xanthomonas campestris, in sensing redox-cycling drugs and regulating a protective gene that have overall implications for bacterial stress physiology and virulence on a host plant

Author keywords

[No Author keywords available]

Indexed keywords

SOXR PROTEIN; TRANSCRIPTION FACTOR; UNCLASSIFIED DRUG;

EID: 84855891357     PISSN: 00219193     EISSN: 10985530     Source Type: Journal    
DOI: 10.1128/JB.05603-11     Document Type: Article
Times cited : (14)

References (46)
  • 1
    • 0032914295 scopus 로고    scopus 로고
    • The pKNOCK series of broad-host-range mobilizable suicide vectors for gene knockout and targeted DNA insertion into the chromosome of gram-negative bacteria
    • 828
    • Alexeyev MF. 1999. The pKNOCK series of broad-host-range mobilizable suicide vectors for gene knockout and targeted DNA insertion into the chromosome of gram-negative bacteria. Biotechniques 26:824-826, 828.
    • (1999) Biotechniques , vol.26 , pp. 824-826
    • Alexeyev, M.F.1
  • 2
    • 0031877016 scopus 로고    scopus 로고
    • Combining evidence using p-values: application to sequence homology searches
    • Bailey TL, Gribskov M. 1998. Combining evidence using p-values: application to sequence homology searches. Bioinformatics 14:48-54.
    • (1998) Bioinformatics , vol.14 , pp. 48-54
    • Bailey, T.L.1    Gribskov, M.2
  • 4
    • 80052531397 scopus 로고    scopus 로고
    • Evaluation of the virulence of Xanthomonas campestris pv. campestris mutant strains lacking functional genes in the OxyR regulon
    • Charoenlap N, et al. 2011. Evaluation of the virulence of Xanthomonas campestris pv. campestris mutant strains lacking functional genes in the OxyR regulon. Curr. Microbiol. 63:232-237.
    • (2011) Curr. Microbiol. , vol.63 , pp. 232-237
    • Charoenlap, N.1
  • 5
    • 14044265674 scopus 로고    scopus 로고
    • Genetic and physiological analysis of the major OxyR-regulated katA from Xanthomonas campestris pv. phaseoli
    • Chauvatcharin N, et al. 2005. Genetic and physiological analysis of the major OxyR-regulated katA from Xanthomonas campestris pv. phaseoli. Microbiology 151:597-605.
    • (2005) Microbiology , vol.151 , pp. 597-605
    • Chauvatcharin, N.1
  • 6
    • 0037161811 scopus 로고    scopus 로고
    • Comparison of the genomes of two Xanthomonas pathogens with differing host specificities
    • da Silva AC, et al. 2002. Comparison of the genomes of two Xanthomonas pathogens with differing host specificities. Nature 417:459-463.
    • (2002) Nature , vol.417 , pp. 459-463
    • da Silva, A.C.1
  • 7
    • 0036365511 scopus 로고    scopus 로고
    • Escherichia coli SoxR protein: sensor/transducer of oxidative stress and nitric oxide
    • Demple B, Ding H, Jorgensen M. 2002. Escherichia coli SoxR protein: sensor/transducer of oxidative stress and nitric oxide. Methods Enzymol. 348:355-364.
    • (2002) Methods Enzymol. , vol.348 , pp. 355-364
    • Demple, B.1    Ding, H.2    Jorgensen, M.3
  • 8
    • 0032612908 scopus 로고    scopus 로고
    • Transcriptional regulation via redox-sensitive iron-sulphur centres in an oxidative stress response
    • Demple B, Hidalgo E, Ding H. 1999. Transcriptional regulation via redox-sensitive iron-sulphur centres in an oxidative stress response. Biochem. Soc. Symp. 64:119-128.
    • (1999) Biochem. Soc. Symp. , vol.64 , pp. 119-128
    • Demple, B.1    Hidalgo, E.2    Ding, H.3
  • 9
    • 33747082622 scopus 로고    scopus 로고
    • The phenazine pyocyanin is a terminal signalling factor in the quorum sensing network of Pseudomonas aeruginosa
    • Dietrich LE, Price-Whelan A, Petersen A, Whiteley M, Newman DK. 2006. The phenazine pyocyanin is a terminal signalling factor in the quorum sensing network of Pseudomonas aeruginosa. Mol. Microbiol. 61:1308-1321.
    • (2006) Mol. Microbiol. , vol.61 , pp. 1308-1321
    • Dietrich, L.E.1    Price-Whelan, A.2    Petersen, A.3    Whiteley, M.4    Newman, D.K.5
  • 10
    • 50649098819 scopus 로고    scopus 로고
    • Redoxactive antibiotics control gene expression and community behavior in divergent bacteria
    • Dietrich LE, Teal TK, Price-Whelan A, Newman DK. 2008. Redoxactive antibiotics control gene expression and community behavior in divergent bacteria. Science 321:1203-1206.
    • (2008) Science , vol.321 , pp. 1203-1206
    • Dietrich, L.E.1    Teal, T.K.2    Price-Whelan, A.3    Newman, D.K.4
  • 11
    • 33845411514 scopus 로고    scopus 로고
    • Agrobacterium tumefaciens soxR is involved in superoxide stress protection and also directly regulates superoxide-inducible expression of itself and a target gene
    • Eiamphungporn W, Charoenlap N, Vattanaviboon P, Mongkolsuk S. 2006. Agrobacterium tumefaciens soxR is involved in superoxide stress protection and also directly regulates superoxide-inducible expression of itself and a target gene. J. Bacteriol. 188:8669-8673.
    • (2006) J. Bacteriol. , vol.188 , pp. 8669-8673
    • Eiamphungporn, W.1    Charoenlap, N.2    Vattanaviboon, P.3    Mongkolsuk, S.4
  • 12
    • 79951789722 scopus 로고    scopus 로고
    • The SoxRS response of Escherichia coli is directly activated by redox-cycling drugs rather than by superoxide
    • Gu M, Imlay JA. 2011. The SoxRS response of Escherichia coli is directly activated by redox-cycling drugs rather than by superoxide. Mol. Microbiol. 79:1136-1150.
    • (2011) Mol. Microbiol. , vol.79 , pp. 1136-1150
    • Gu, M.1    Imlay, J.A.2
  • 13
    • 0032884073 scopus 로고    scopus 로고
    • Expression of the soxR gene of Pseudomonas aeruginosa is inducible during infection of burn wounds in mice and is required to cause efficient bacteremia
    • Ha U, Jin S. 1999. Expression of the soxR gene of Pseudomonas aeruginosa is inducible during infection of burn wounds in mice and is required to cause efficient bacteremia. Infect. Immun. 67:5324-5331.
    • (1999) Infect. Immun. , vol.67 , pp. 5324-5331
    • Ha, U.1    Jin, S.2
  • 14
    • 0028049068 scopus 로고
    • An iron-sulfur center essential for transcriptional activation by the redox-sensing SoxR protein
    • Hidalgo E, Demple B. 1994. An iron-sulfur center essential for transcriptional activation by the redox-sensing SoxR protein. EMBO J. 13:138-146.
    • (1994) EMBO J , vol.13 , pp. 138-146
    • Hidalgo, E.1    Demple, B.2
  • 15
    • 0031041391 scopus 로고    scopus 로고
    • Spacing of promoter elements regulates the basal expression of the soxS gene and converts SoxR from a transcriptional activator into a repressor
    • Hidalgo E, Demple B. 1997. Spacing of promoter elements regulates the basal expression of the soxS gene and converts SoxR from a transcriptional activator into a repressor. EMBO J. 16:1056-1065.
    • (1997) EMBO J. , vol.16 , pp. 1056-1065
    • Hidalgo, E.1    Demple, B.2
  • 16
    • 0030912902 scopus 로고    scopus 로고
    • Redox signal transduction via iron-sulfur clusters in the SoxR transcription activator
    • Hidalgo E, Ding H, Demple B. 1997. Redox signal transduction via iron-sulfur clusters in the SoxR transcription activator. Trends Biochem. Sci. 22:207-210.
    • (1997) Trends Biochem. Sci. , vol.22 , pp. 207-210
    • Hidalgo, E.1    Ding, H.2    Demple, B.3
  • 17
    • 0032079338 scopus 로고    scopus 로고
    • The redox-regulated SoxR protein acts from a single DNA site as a repressor and an allosteric activator
    • Hidalgo E, Leautaud V, Demple B. 1998. The redox-regulated SoxR protein acts from a single DNA site as a repressor and an allosteric activator. EMBO J. 17:2629-2636.
    • (1998) EMBO J. , vol.17 , pp. 2629-2636
    • Hidalgo, E.1    Leautaud, V.2    Demple, B.3
  • 18
    • 79956087909 scopus 로고    scopus 로고
    • Many plants and bacteria excrete redox-cycling compounds
    • Imlay J, Gu M. 2011. Many plants and bacteria excrete redox-cycling compounds. Free Radic. Biol. Med. 50:1814-1815.
    • (2011) Free Radic. Biol. Med. , vol.50 , pp. 1814-1815
    • Imlay, J.1    Gu, M.2
  • 19
    • 34548484841 scopus 로고    scopus 로고
    • The virulence of Vibrio vulnificus is affected by the cellular level of superoxide dismutase activity
    • Kang IH, Kim JS, Lee JK. 2007. The virulence of Vibrio vulnificus is affected by the cellular level of superoxide dismutase activity. J. Microbiol. Biotechnol. 17:1399-1402.
    • (2007) J. Microbiol. Biotechnol. , vol.17 , pp. 1399-1402
    • Kang, I.H.1    Kim, J.S.2    Lee, J.K.3
  • 20
    • 0029946818 scopus 로고    scopus 로고
    • Promoter analysis of the Xanthomonas campestris pv. campestris gum operon directing biosynthesis of the xanthan polysaccharide
    • Katzen F, Becker A, Zorreguieta A, Puhler A, Ielpi L. 1996. Promoter analysis of the Xanthomonas campestris pv. campestris gum operon directing biosynthesis of the xanthan polysaccharide. J. Bacteriol. 178:4313-4318.
    • (1996) J. Bacteriol. , vol.178 , pp. 4313-4318
    • Katzen, F.1    Becker, A.2    Zorreguieta, A.3    Puhler, A.4    Ielpi, L.5
  • 21
    • 14944340675 scopus 로고    scopus 로고
    • Activation of SoxR-dependent transcription in Pseudomonas aeruginosa
    • Kobayashi K, Tagawa S. 2004. Activation of SoxR-dependent transcription in Pseudomonas aeruginosa. J. Biochem. 136:607-615.
    • (2004) J. Biochem. , vol.136 , pp. 607-615
    • Kobayashi, K.1    Tagawa, S.2
  • 22
    • 0028793123 scopus 로고
    • Four new derivatives of the broad-host-range cloning vector pBBR1MCS, carrying different antibiotic-resistance cassettes
    • Kovach ME, et al. 1995. Four new derivatives of the broad-host-range cloning vector pBBR1MCS, carrying different antibiotic-resistance cassettes. Gene 166:175-176.
    • (1995) Gene , vol.166 , pp. 175-176
    • Kovach, M.E.1
  • 24
    • 13744253238 scopus 로고    scopus 로고
    • The genome sequence of Xanthomonas oryzae pathovar oryzae KACC10331, the bacterial blight pathogen of rice
    • Lee BM, et al. 2005. The genome sequence of Xanthomonas oryzae pathovar oryzae KACC10331, the bacterial blight pathogen of rice. Nucleic Acids Res. 33:577-586.
    • (2005) Nucleic Acids Res. , vol.33 , pp. 577-586
    • Lee, B.M.1
  • 25
    • 69449087074 scopus 로고    scopus 로고
    • DNA-mediated redox signaling for transcriptional activation of SoxR
    • Lee PE, Demple B, Barton JK. 2009. DNA-mediated redox signaling for transcriptional activation of SoxR. Proc. Natl. Acad. Sci. U. S. A. 106:13164-13168.
    • (2009) Proc. Natl. Acad. Sci. U. S. A. , vol.106 , pp. 13164-13168
    • Lee, P.E.1    Demple, B.2    Barton, J.K.3
  • 26
    • 0014691242 scopus 로고
    • Superoxide dismutase: an enzymatic function for erythrocuprein
    • McCord JM, Fridovich I. 1969. Superoxide dismutase: an enzymatic function for erythrocuprein. J. Biol. Chem. 244:6049-6055.
    • (1969) J. Biol. Chem. , vol.244 , pp. 6049-6055
    • McCord, J.M.1    Fridovich, I.2
  • 27
    • 77950660340 scopus 로고    scopus 로고
    • Novel insights into the genomic basis of citrus canker based on the genome sequences of two strains of Xanthomonas fuscans subsp. aurantifolii
    • Moreira LM, et al. 2010. Novel insights into the genomic basis of citrus canker based on the genome sequences of two strains of Xanthomonas fuscans subsp. aurantifolii. BMC Genomics 11:238.
    • (2010) BMC Genomics , vol.11 , pp. 238
    • Moreira, L.M.1
  • 28
    • 1642514907 scopus 로고    scopus 로고
    • Prominent roles of the NorR and Fur regulators in the Escherichia coli transcriptional response to reactive nitrogen species
    • Mukhopadhyay P, Zheng M, Bedzyk LA, LaRossa RA, Storz G. 2004. Prominent roles of the NorR and Fur regulators in the Escherichia coli transcriptional response to reactive nitrogen species. Proc. Natl. Acad. Sci. U. S. A. 101:745-750.
    • (2004) Proc. Natl. Acad. Sci. U. S. A. , vol.101 , pp. 745-750
    • Mukhopadhyay, P.1    Zheng, M.2    Bedzyk, L.A.3    LaRossa, R.A.4    Storz, G.5
  • 29
    • 17644408447 scopus 로고    scopus 로고
    • Pseudomonas aeruginosa SoxR does not conform to the archetypal paradigm for SoxR-dependent regulation of the bacterial oxidative stress adaptive response
    • Palma M, et al. 2005. Pseudomonas aeruginosa SoxR does not conform to the archetypal paradigm for SoxR-dependent regulation of the bacterial oxidative stress adaptive response. Infect. Immun. 73:2958-2966.
    • (2005) Infect. Immun. , vol.73 , pp. 2958-2966
    • Palma, M.1
  • 30
    • 0036032183 scopus 로고    scopus 로고
    • OhrR, a transcription repressor that senses and responds to changes in organic peroxide levels in Xanthomonas campestris pv. phaseoli
    • Panmanee W, et al. 2002. OhrR, a transcription repressor that senses and responds to changes in organic peroxide levels in Xanthomonas campestris pv. phaseoli. Mol. Microbiol. 45:1647-1654.
    • (2002) Mol. Microbiol. , vol.45 , pp. 1647-1654
    • Panmanee, W.1
  • 31
    • 30944437009 scopus 로고    scopus 로고
    • Regulation of superoxide stress in Pseudomonas putida KT2440 is different from the SoxR paradigm in Escherichia coli
    • Park W, Pena-Llopis S, Lee Y, Demple B. 2006. Regulation of superoxide stress in Pseudomonas putida KT2440 is different from the SoxR paradigm in Escherichia coli. Biochem. Biophys. Res. Commun. 341:51-56.
    • (2006) Biochem. Biophys. Res. Commun. , vol.341 , pp. 51-56
    • Park, W.1    Pena-Llopis, S.2    Lee, Y.3    Demple, B.4
  • 32
    • 78349260817 scopus 로고    scopus 로고
    • Copper ions potentiate organic hydroperoxide and hydrogen peroxide toxicity through different mechanisms in Xanthomonas campestris pv. campestris
    • Patikarnmonthon N, et al. 2010. Copper ions potentiate organic hydroperoxide and hydrogen peroxide toxicity through different mechanisms in Xanthomonas campestris pv. campestris. FEMS Microbiol. Lett. 313:75-80.
    • (2010) FEMS Microbiol. Lett. , vol.313 , pp. 75-80
    • Patikarnmonthon, N.1
  • 33
    • 75449104484 scopus 로고    scopus 로고
    • The complete genome sequence of Xanthomonas albilineans provides new insights into the reductive genome evolution of the xylem-limited Xanthomonadaceae
    • Pieretti I, et al. 2009. The complete genome sequence of Xanthomonas albilineans provides new insights into the reductive genome evolution of the xylem-limited Xanthomonadaceae. BMC Genomics 10:616.
    • (2009) BMC Genomics , vol.10 , pp. 616
    • Pieretti, I.1
  • 34
    • 1842471990 scopus 로고    scopus 로고
    • The role of a bifunctional catalase-peroxidase KatA in protection of Agrobacterium tumefaciens from menadione toxicity
    • Prapagdee B, Vattanaviboon P, Mongkolsuk S. 2004. The role of a bifunctional catalase-peroxidase KatA in protection of Agrobacterium tumefaciens from menadione toxicity. FEMS Microbiol. Lett. 232:217-223.
    • (2004) FEMS Microbiol. Lett. , vol.232 , pp. 217-223
    • Prapagdee, B.1    Vattanaviboon, P.2    Mongkolsuk, S.3
  • 35
    • 22344455805 scopus 로고    scopus 로고
    • Comparative and functional genomic analyses of the pathogenicity of phytopathogen Xanthomonas campestris pv. campestris
    • Qian W, et al. 2005. Comparative and functional genomic analyses of the pathogenicity of phytopathogen Xanthomonas campestris pv. campestris. Genome Res. 15:757-767.
    • (2005) Genome Res. , vol.15 , pp. 757-767
    • Qian, W.1
  • 36
    • 23144458473 scopus 로고    scopus 로고
    • InterProScan: protein domains identifier
    • Quevillon E, et al. 2005. InterProScan: protein domains identifier. Nucleic Acids Res. 33:W116-W120.
    • (2005) Nucleic Acids Res. , vol.33 , pp. 116-120
    • Quevillon, E.1
  • 37
    • 37449030210 scopus 로고    scopus 로고
    • Multiple superoxide dismutases in Agrobacterium tumefaciens: functional analysis, gene regulation, and influence on tumorigenesis
    • Saenkham P, Eiamphungporn W, Farrand SK, Vattanaviboon P, Mongkolsuk S. 2007. Multiple superoxide dismutases in Agrobacterium tumefaciens: functional analysis, gene regulation, and influence on tumorigenesis. J. Bacteriol. 189:8807-8817.
    • (2007) J. Bacteriol. , vol.189 , pp. 8807-8817
    • Saenkham, P.1    Eiamphungporn, W.2    Farrand, S.K.3    Vattanaviboon, P.4    Mongkolsuk, S.5
  • 38
    • 46049099151 scopus 로고    scopus 로고
    • Genome sequence and rapid evolution of the rice pathogen Xanthomonas oryzae pv. oryzae PXO99A
    • Salzberg SL, et al. 2008. Genome sequence and rapid evolution of the rice pathogen Xanthomonas oryzae pv. oryzae PXO99A. BMC Genomics 9:204.
    • (2008) BMC Genomics , vol.9 , pp. 204
    • Salzberg, S.L.1
  • 40
    • 0032843484 scopus 로고    scopus 로고
    • Microbial ubiquinones: multiple roles in respiration, gene regulation and oxidative stress management
    • Soballe B, Poole RK. 1999. Microbial ubiquinones: multiple roles in respiration, gene regulation and oxidative stress management. Microbiology 145:1817-1830.
    • (1999) Microbiology , vol.145 , pp. 1817-1830
    • Soballe, B.1    Poole, R.K.2
  • 41
    • 77956033435 scopus 로고    scopus 로고
    • Genome-wide sequencing data reveals virulence factors implicated in banana Xanthomonas wilt
    • Studholme DJ, et al. 2010. Genome-wide sequencing data reveals virulence factors implicated in banana Xanthomonas wilt. FEMS Microbiol. Lett. 310:182-192.
    • (2010) FEMS Microbiol. Lett. , vol.310 , pp. 182-192
    • Studholme, D.J.1
  • 42
    • 27144440067 scopus 로고    scopus 로고
    • Insights into genome plasticity and pathogenicity of the plant pathogenic bacterium Xanthomonas campestris pv. vesicatoria revealed by the complete genome sequence
    • Thieme F, et al. 2005. Insights into genome plasticity and pathogenicity of the plant pathogenic bacterium Xanthomonas campestris pv. vesicatoria revealed by the complete genome sequence. J. Bacteriol. 187:7254-7266.
    • (2005) J. Bacteriol. , vol.187 , pp. 7254-7266
    • Thieme, F.1
  • 43
    • 39649106315 scopus 로고    scopus 로고
    • The genome of Xanthomonas campestris pv. campestris B100 and its use for the reconstruction of metabolic pathways involved in xanthan biosynthesis
    • Vorholter FJ, et al. 2008. The genome of Xanthomonas campestris pv. campestris B100 and its use for the reconstruction of metabolic pathways involved in xanthan biosynthesis. J. Biotechnol. 134:33-45.
    • (2008) J. Biotechnol. , vol.134 , pp. 33-45
    • Vorholter, F.J.1
  • 44
    • 41949137280 scopus 로고    scopus 로고
    • Crystal structure of the [2Fe-2S] oxidative-stress sensor SoxR bound to DNA
    • Watanabe S, Kita A, Kobayashi K, Miki K. 2008. Crystal structure of the [2Fe-2S] oxidative-stress sensor SoxR bound to DNA. Proc. Natl. Acad. Sci. U. S. A. 105:4121-4126.
    • (2008) Proc. Natl. Acad. Sci. U. S. A. , vol.105 , pp. 4121-4126
    • Watanabe, S.1    Kita, A.2    Kobayashi, K.3    Miki, K.4
  • 45
    • 0001350662 scopus 로고
    • Black rot: a continuing threat to world crucifers
    • Williams PH. 1980. Black rot: a continuing threat to world crucifers. Plant Dis. 64:736-742.
    • (1980) Plant Dis. , vol.64 , pp. 736-742
    • Williams, P.H.1
  • 46
    • 0026638855 scopus 로고
    • Two-stage induction of the soxRS (superoxide response) regulon of Escherichia coli
    • Wu J, Weiss B. 1992. Two-stage induction of the soxRS (superoxide response) regulon of Escherichia coli. J. Bacteriol. 174:3915-3920.
    • (1992) J. Bacteriol. , vol.174 , pp. 3915-3920
    • Wu, J.1    Weiss, B.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.