-
1
-
-
33846923050
-
Genome dynamics in a natural archaeal population
-
Allen, E.E., Tyson, G.W., Whitaker, R.J., Detter, J.C., Richardson, P.M., and Banfield, J.F. (2007) Genome dynamics in a natural archaeal population. Proc Natl Acad Sci USA 104: 1883-1888.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 1883-1888
-
-
Allen, E.E.1
Tyson, G.W.2
Whitaker, R.J.3
Detter, J.C.4
Richardson, P.M.5
Banfield, J.F.6
-
2
-
-
0012544141
-
Microbiology: eukaryotic diversity in Spain's River of Fire
-
Amaral Zettler, L.A., Gomez, F., Zettler, E., Keenan, B.G., Amils, R., and Sogin, M.L. (2002) Microbiology: eukaryotic diversity in Spain's River of Fire. Nature 417: 137.
-
(2002)
Nature
, vol.417
, pp. 137
-
-
Amaral Zettler, L.A.1
Gomez, F.2
Zettler, E.3
Keenan, B.G.4
Amils, R.5
Sogin, M.L.6
-
3
-
-
72449130421
-
Regulation of the iron and sulfur oxidation pathways in the acidophilic Acidithiobacillus ferrooxidans
-
Amouric, A., Appia-Ayme, C., Yarzabal, A., and Bonnefoy, V. (2009) Regulation of the iron and sulfur oxidation pathways in the acidophilic Acidithiobacillus ferrooxidans. Adv Mat Res 71-73: 163-166.
-
(2009)
Adv Mat Res
, vol.71-73
, pp. 163-166
-
-
Amouric, A.1
Appia-Ayme, C.2
Yarzabal, A.3
Bonnefoy, V.4
-
4
-
-
78650743376
-
Phylogenetic and genetic variation among Fe(II)-oxidizing acidithiobacilli supports the view that these comprise multiple species with different ferrous iron oxidation pathways
-
Amouric, A., Brochier-Armanet, C., Johnson, D.B., Bonnefoy, V., and Hallberg, K.B. (2011) Phylogenetic and genetic variation among Fe(II)-oxidizing acidithiobacilli supports the view that these comprise multiple species with different ferrous iron oxidation pathways. Microbiology 157: 111-122.
-
(2011)
Microbiology
, vol.157
, pp. 111-122
-
-
Amouric, A.1
Brochier-Armanet, C.2
Johnson, D.B.3
Bonnefoy, V.4
Hallberg, K.B.5
-
5
-
-
0038579427
-
Bacterial iron homeostasis
-
Andrews, S.C., Robinson, A.K., and Rodriguez-Quinones, F. (2003) Bacterial iron homeostasis. FEMS Microbiol Rev 27: 215-237.
-
(2003)
FEMS Microbiol Rev
, vol.27
, pp. 215-237
-
-
Andrews, S.C.1
Robinson, A.K.2
Rodriguez-Quinones, F.3
-
6
-
-
57449106295
-
Identification of components of electron transport chains in the extremely thermoacidophilic crenarchaeon Metallosphaera sedula through iron and sulfur compound oxidation transcriptomes
-
Auernik, K.S., and Kelly, R.M. (2008) Identification of components of electron transport chains in the extremely thermoacidophilic crenarchaeon Metallosphaera sedula through iron and sulfur compound oxidation transcriptomes. Appl Environ Microbiol 74: 7723-7732.
-
(2008)
Appl Environ Microbiol
, vol.74
, pp. 7723-7732
-
-
Auernik, K.S.1
Kelly, R.M.2
-
7
-
-
38949170756
-
The genome sequence of the metal-mobilizing, extremely thermoacidophilic archaeon Metallosphaera sedula provides insights into bioleaching-associated metabolism
-
Auernik, K.S., Maezato, Y., Blum, P.H., and Kelly, R.M. (2008) The genome sequence of the metal-mobilizing, extremely thermoacidophilic archaeon Metallosphaera sedula provides insights into bioleaching-associated metabolism. Appl Environ Microbiol 74: 682-692.
-
(2008)
Appl Environ Microbiol
, vol.74
, pp. 682-692
-
-
Auernik, K.S.1
Maezato, Y.2
Blum, P.H.3
Kelly, R.M.4
-
8
-
-
0037447834
-
Microbial communities in acid mine drainage
-
Baker, B.J., and Banfield, J.F. (2003) Microbial communities in acid mine drainage. FEMS Microbiol Ecol 44: 139-152.
-
(2003)
FEMS Microbiol Ecol
, vol.44
, pp. 139-152
-
-
Baker, B.J.1
Banfield, J.F.2
-
9
-
-
63849157501
-
Insights into the diversity of eukaryotes in acid mine drainage biofilm communities
-
Baker, B.J., Tyson, G.W., Goosherst, L., and Banfield, J.F. (2009) Insights into the diversity of eukaryotes in acid mine drainage biofilm communities. Appl Environ Microbiol 75: 2192-2199.
-
(2009)
Appl Environ Microbiol
, vol.75
, pp. 2192-2199
-
-
Baker, B.J.1
Tyson, G.W.2
Goosherst, L.3
Banfield, J.F.4
-
10
-
-
34047264809
-
Life in acid: pH homeostasis in acidophiles
-
Baker-Austin, C., and Dopson, M. (2007) Life in acid: pH homeostasis in acidophiles. Trends Microbiol 15: 165-171.
-
(2007)
Trends Microbiol
, vol.15
, pp. 165-171
-
-
Baker-Austin, C.1
Dopson, M.2
-
11
-
-
57649183890
-
The cytochrome ba complex from the thermoacidophilic crenarchaeote Acidianus ambivalens is an analog of bc(1) complexes
-
Bandeiras, T.M., Refojo, P.N., Todorovic, S., Murgida, D.H., Hildebrandt, P., Bauer, C., etal. (2009) The cytochrome ba complex from the thermoacidophilic crenarchaeote Acidianus ambivalens is an analog of bc(1) complexes. Biochim Biophys Acta 1787: 37-45.
-
(2009)
Biochim Biophys Acta
, vol.1787
, pp. 37-45
-
-
Bandeiras, T.M.1
Refojo, P.N.2
Todorovic, S.3
Murgida, D.H.4
Hildebrandt, P.5
Bauer, C.6
-
12
-
-
0025365717
-
Respiratory chain components of iron-oxidizing, acidophilic bacteria
-
Barr, D.W., Ingledew, W.J., and Norris, P.R. (1990) Respiratory chain components of iron-oxidizing, acidophilic bacteria. FEMS Microbiol Lett 70: 85-90.
-
(1990)
FEMS Microbiol Lett
, vol.70
, pp. 85-90
-
-
Barr, D.W.1
Ingledew, W.J.2
Norris, P.R.3
-
13
-
-
34247594176
-
Ferrous iron- and sulfur-induced genes in Sulfolobus metallicus
-
Bathe, S., and Norris, P.R. (2007) Ferrous iron- and sulfur-induced genes in Sulfolobus metallicus. Appl Environ Microbiol 73: 2491-2497.
-
(2007)
Appl Environ Microbiol
, vol.73
, pp. 2491-2497
-
-
Bathe, S.1
Norris, P.R.2
-
14
-
-
76149105866
-
Regulation of gene expression in response to oxygen tension
-
Hunter, C.N., Daldal, F., Thurnauer, M.C., and Beatty, J.T. (eds). Dordrecht, The Netherlands: Springer Science
-
Bauer, C., Setterdahl, A., Wu, J., and Robinson, B.R. (2009) Regulation of gene expression in response to oxygen tension. In The Purple Phototrophic Bacteria. Hunter, C.N., Daldal, F., Thurnauer, M.C., and Beatty, J.T. (eds). Dordrecht, The Netherlands: Springer Science, pp. 707-725.
-
(2009)
The Purple Phototrophic Bacteria
, pp. 707-725
-
-
Bauer, C.1
Setterdahl, A.2
Wu, J.3
Robinson, B.R.4
-
15
-
-
0032570018
-
Sequence and expression of the rusticyanin structural gene from Thiobacillus ferrooxidans ATCC33020 strain
-
Bengrine, A., Guiliani, N., Appia-Ayme, C., Jedlicki, E., Holmes, D.S., Chippaux, M., and Bonnefoy, V. (1998) Sequence and expression of the rusticyanin structural gene from Thiobacillus ferrooxidans ATCC33020 strain. Biochim Biophys Acta 1443: 99-112.
-
(1998)
Biochim Biophys Acta
, vol.1443
, pp. 99-112
-
-
Bengrine, A.1
Guiliani, N.2
Appia-Ayme, C.3
Jedlicki, E.4
Holmes, D.S.5
Chippaux, M.6
Bonnefoy, V.7
-
16
-
-
79959886819
-
Bioenergetic challenges of microbial iron metabolism
-
Bird, L.J., Bonnefoy, V., and Newman, D.K. (2011) Bioenergetic challenges of microbial iron metabolism. Trends Microbiol 19: 330-340.
-
(2011)
Trends Microbiol
, vol.19
, pp. 330-340
-
-
Bird, L.J.1
Bonnefoy, V.2
Newman, D.K.3
-
17
-
-
6044266986
-
Respiratory components in acidophilic bacteria that respire on iron
-
Blake, R.C., 2nd, Shute, E.A., Waskovsky, J., and Harrison, A.P., Jr (1992) Respiratory components in acidophilic bacteria that respire on iron. Geomicrobiol J 10: 173-192.
-
(1992)
Geomicrobiol J
, vol.10
, pp. 173-192
-
-
Blake 2nd, R.C.1
Shute, E.A.2
Waskovsky, J.3
Harrison Jr., A.P.4
-
18
-
-
0027303813
-
Enzymes of aerobic respiration on iron
-
Blake, R.C., 2nd, Shute, E.A., Greenwood, M.M., Spencer, G.H., and Ingledew, W.J. (1993) Enzymes of aerobic respiration on iron. FEMS Microbiol Rev 11: 9-18.
-
(1993)
FEMS Microbiol Rev
, vol.11
, pp. 9-18
-
-
Blake 2nd, R.C.1
Shute, E.A.2
Greenwood, M.M.3
Spencer, G.H.4
Ingledew, W.J.5
-
19
-
-
78149361005
-
Bioinformatics and genomics of iron- and sulfur-oxidizing acidophiles
-
Barton, L.L., Mandl, M., and Loy, A. (eds). Dordrecht, Heidelberg, London, New York: Springer
-
Bonnefoy, V. (2010) Bioinformatics and genomics of iron- and sulfur-oxidizing acidophiles. In Geomicrobiology: Molecular and Environmental Perspective. Barton, L.L., Mandl, M., and Loy, A. (eds). Dordrecht, Heidelberg, London, New York: Springer, pp. 169-192.
-
(2010)
Geomicrobiology: Molecular and Environmental Perspective
, pp. 169-192
-
-
Bonnefoy, V.1
-
20
-
-
33846326537
-
Differential expression of two bc(1) complexes in the strict acidophilic chemolithoautotrophic bacterium Acidithiobacillus ferrooxidans suggests a model for their respective roles in iron or sulfur oxidation
-
Bruscella, P., Appia-Ayme, C., Levican, G., Ratouchniak, J., Jedlicki, E., Holmes, D.S., and Bonnefoy, V. (2007) Differential expression of two bc(1) complexes in the strict acidophilic chemolithoautotrophic bacterium Acidithiobacillus ferrooxidans suggests a model for their respective roles in iron or sulfur oxidation. Microbiology 153: 102-110.
-
(2007)
Microbiology
, vol.153
, pp. 102-110
-
-
Bruscella, P.1
Appia-Ayme, C.2
Levican, G.3
Ratouchniak, J.4
Jedlicki, E.5
Holmes, D.S.6
Bonnefoy, V.7
-
21
-
-
78149359126
-
Lessons from the genomes of extremely acidophilic bacteria and archaea with special emphasis on bioleaching microorganisms
-
Cardenas, J.P., Valdes, J., Quatrini, R., Duarte, F., and Holmes, D.S. (2010) Lessons from the genomes of extremely acidophilic bacteria and archaea with special emphasis on bioleaching microorganisms. Appl Microbiol Biotechnol 88: 605-620.
-
(2010)
Appl Microbiol Biotechnol
, vol.88
, pp. 605-620
-
-
Cardenas, J.P.1
Valdes, J.2
Quatrini, R.3
Duarte, F.4
Holmes, D.S.5
-
22
-
-
77954359625
-
An unconventional copper protein required for cytochrome c oxidase respiratory function under extreme acidic conditions
-
Castelle, C., Ilbert, M., Infossi, P., Leroy, G., and Giudici-Orticoni, M.T. (2010) An unconventional copper protein required for cytochrome c oxidase respiratory function under extreme acidic conditions. J Biol Chem 285: 21519-21525.
-
(2010)
J Biol Chem
, vol.285
, pp. 21519-21525
-
-
Castelle, C.1
Ilbert, M.2
Infossi, P.3
Leroy, G.4
Giudici-Orticoni, M.T.5
-
23
-
-
0028858948
-
Biochemical and EPR characterization of a high potential iron-sulfur protein in Thiobacillus ferrooxidans
-
Cavazza, C., Guigliarelli, B., Bertrand, P., and Bruschi, M. (1995) Biochemical and EPR characterization of a high potential iron-sulfur protein in Thiobacillus ferrooxidans. FEMS Microbiol Lett 130: 193-200.
-
(1995)
FEMS Microbiol Lett
, vol.130
, pp. 193-200
-
-
Cavazza, C.1
Guigliarelli, B.2
Bertrand, P.3
Bruschi, M.4
-
24
-
-
77952334099
-
Proteomic analysis of the response of an acidophilic strain of Chlamydomonas sp. (Chlorophyta) to natural metal-rich water
-
Cid, C., Garcia-Descalzo, L., Casado-Lafuente, V., Amils, R., and Aguilera, A. (2010) Proteomic analysis of the response of an acidophilic strain of Chlamydomonas sp. (Chlorophyta) to natural metal-rich water. Proteomics 10: 2026-2036.
-
(2010)
Proteomics
, vol.10
, pp. 2026-2036
-
-
Cid, C.1
Garcia-Descalzo, L.2
Casado-Lafuente, V.3
Amils, R.4
Aguilera, A.5
-
25
-
-
33947354188
-
The fox operon from Rhodobacter strain SW2 promotes phototrophic Fe(II) oxidation in Rhodobacter capsulatus SB1003
-
Croal, L.R., Jiao, Y., and Newman, D.K. (2007) The fox operon from Rhodobacter strain SW2 promotes phototrophic Fe(II) oxidation in Rhodobacter capsulatus SB1003. J Bacteriol 189: 1774-1782.
-
(2007)
J Bacteriol
, vol.189
, pp. 1774-1782
-
-
Croal, L.R.1
Jiao, Y.2
Newman, D.K.3
-
26
-
-
77957777240
-
Microbial succession during a heap bioleaching cycle of low grade copper sulfides. Does this knowledge mean a real input for industrial process design and control?
-
Demergasso, C., Galleguillos, F., Soto, P., Seron, M., and Iturriaga, V. (2010) Microbial succession during a heap bioleaching cycle of low grade copper sulfides. Does this knowledge mean a real input for industrial process design and control? Hydrometallurgy 104: 382-390.
-
(2010)
Hydrometallurgy
, vol.104
, pp. 382-390
-
-
Demergasso, C.1
Galleguillos, F.2
Soto, P.3
Seron, M.4
Iturriaga, V.5
-
27
-
-
77951498518
-
AMD biofilms: using model communities to study microbial evolution and ecological complexity in nature
-
Denef, V.J., Mueller, R.S., and Banfield, J.F. (2010) AMD biofilms: using model communities to study microbial evolution and ecological complexity in nature. ISME J 4: 599-610.
-
(2010)
ISME J
, vol.4
, pp. 599-610
-
-
Denef, V.J.1
Mueller, R.S.2
Banfield, J.F.3
-
28
-
-
84863199713
-
Physiological adaptations and biotechnical applications of acidophiles
-
Anitori, R. (ed.). Norwich, UK: Caister Academic Press
-
Dopson, M. (2010) Physiological adaptations and biotechnical applications of acidophiles. In Extremophiles: Microbiology and Biotechnology. Anitori, R. (ed.). Norwich, UK: Caister Academic Press, pp. 265-294.
-
(2010)
Extremophiles: Microbiology and Biotechnology
, pp. 265-294
-
-
Dopson, M.1
-
29
-
-
0036549656
-
ATP generation during reduced inorganic sulfur compound oxidation by Acidithiobacillus caldus is exclusively due to electron transport phosphorylation
-
Dopson, M., Lindstrom, E.B., and Hallberg, K.B. (2002) ATP generation during reduced inorganic sulfur compound oxidation by Acidithiobacillus caldus is exclusively due to electron transport phosphorylation. Extremophiles 6: 123-129.
-
(2002)
Extremophiles
, vol.6
, pp. 123-129
-
-
Dopson, M.1
Lindstrom, E.B.2
Hallberg, K.B.3
-
30
-
-
29244458671
-
Analysis of differential protein expression during growth states of Ferroplasma strains and insights into electron transport for iron oxidation
-
Dopson, M., Baker-Austin, C., and Bond, P.L. (2005) Analysis of differential protein expression during growth states of Ferroplasma strains and insights into electron transport for iron oxidation. Microbiology 151: 4127-4137.
-
(2005)
Microbiology
, vol.151
, pp. 4127-4137
-
-
Dopson, M.1
Baker-Austin, C.2
Bond, P.L.3
-
31
-
-
34547598575
-
Mineral and iron oxidation at low temperatures by pure and mixed cultures of acidophilic microorganisms
-
Dopson, M., Halinen, A.K., Rahunen, N., Ozkaya, B., Sahinkaya, E., Kaksonen, A.H., etal. (2007) Mineral and iron oxidation at low temperatures by pure and mixed cultures of acidophilic microorganisms. Biotechnol Bioeng 97: 1205-1215.
-
(2007)
Biotechnol Bioeng
, vol.97
, pp. 1205-1215
-
-
Dopson, M.1
Halinen, A.K.2
Rahunen, N.3
Ozkaya, B.4
Sahinkaya, E.5
Kaksonen, A.H.6
-
32
-
-
0034123440
-
First evidence for existence of an uphill electron transfer through the bc(1) and NADH-Q oxidoreductase complexes of the acidophilic obligate chemolithotrophic ferrous ion-oxidizing bacterium Thiobacillus ferrooxidans
-
Elbehti, A., Brasseur, G., and Lemesle-Meunier, D. (2000) First evidence for existence of an uphill electron transfer through the bc(1) and NADH-Q oxidoreductase complexes of the acidophilic obligate chemolithotrophic ferrous ion-oxidizing bacterium Thiobacillus ferrooxidans. J Bacteriol 182: 3602-3606.
-
(2000)
J Bacteriol
, vol.182
, pp. 3602-3606
-
-
Elbehti, A.1
Brasseur, G.2
Lemesle-Meunier, D.3
-
33
-
-
77957937698
-
Iron-oxidizing bacteria: an environmental and genomic perspective
-
Emerson, D., Fleming, E.J., and McBeth, J.M. (2010) Iron-oxidizing bacteria: an environmental and genomic perspective. Annu Rev Microbiol 64: 561-583.
-
(2010)
Annu Rev Microbiol
, vol.64
, pp. 561-583
-
-
Emerson, D.1
Fleming, E.J.2
McBeth, J.M.3
-
34
-
-
56449121030
-
Energetic problems faced by micro-organisms growing or surviving on parsimonious energy sources and at acidic pH: I. Acidithiobacillus ferrooxidans as a paradigm
-
Ferguson, S.J., and Ingledew, W.J. (2008) Energetic problems faced by micro-organisms growing or surviving on parsimonious energy sources and at acidic pH: I. Acidithiobacillus ferrooxidans as a paradigm. Biochim Biophys Acta 1777: 1471-1479.
-
(2008)
Biochim Biophys Acta
, vol.1777
, pp. 1471-1479
-
-
Ferguson, S.J.1
Ingledew, W.J.2
-
35
-
-
33846035027
-
The cellular machinery of Ferroplasma acidiphilum is iron-protein-dominated
-
Ferrer, M., Golyshina, O.V., Beloqui, A., Golyshin, P.N., and Timmis, K.N. (2007) The cellular machinery of Ferroplasma acidiphilum is iron-protein-dominated. Nature 445: 91-94.
-
(2007)
Nature
, vol.445
, pp. 91-94
-
-
Ferrer, M.1
Golyshina, O.V.2
Beloqui, A.3
Golyshin, P.N.4
Timmis, K.N.5
-
36
-
-
48249084178
-
A purple acidophilic di-ferric DNA ligase from Ferroplasma
-
Ferrer, M., Golyshina, O.V., Beloqui, A., Bottger, L.H., Andreu, J.M., Polaina, J., etal. (2008) A purple acidophilic di-ferric DNA ligase from Ferroplasma. Proc Natl Acad Sci USA 105: 8878-8883.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, pp. 8878-8883
-
-
Ferrer, M.1
Golyshina, O.V.2
Beloqui, A.3
Bottger, L.H.4
Andreu, J.M.5
Polaina, J.6
-
37
-
-
70349427908
-
Acidophiles: mechanisms to tolerate metal and acid toxicity
-
Gerday, C., and Glansdorff, N. (eds). Washington, DC, USA: ASM press
-
Franke, S., and Rensing, C. (2007) Acidophiles: mechanisms to tolerate metal and acid toxicity. In Physiology and Biochemistry of Extremophiles. Gerday, C., and Glansdorff, N. (eds). Washington, DC, USA: ASM press, pp. 271-277.
-
(2007)
Physiology and Biochemistry of Extremophiles
, pp. 271-277
-
-
Franke, S.1
Rensing, C.2
-
38
-
-
0000949929
-
Fe(II) oxidizing enzyme purified from Thiobacillus ferrooxidans
-
Fukumori, Y., Yano, T., Sato, A., and Yamanaka, T. (1988) Fe(II) oxidizing enzyme purified from Thiobacillus ferrooxidans. FEMS Microbiol Lett 50: 169-172.
-
(1988)
FEMS Microbiol Lett
, vol.50
, pp. 169-172
-
-
Fukumori, Y.1
Yano, T.2
Sato, A.3
Yamanaka, T.4
-
39
-
-
67649576309
-
Community genomic and proteomic analyses of chemoautotrophic iron-oxidizing 'Leptospirillum rubarum' (Group II) and 'Leptospirillum ferrodiazotrophum' (Group III) bacteria in acid mine drainage biofilms
-
Goltsman, D.S., Denef, V.J., Singer, S.W., VerBerkmoes, N.C., Lefsrud, M., Mueller, R.S., etal. (2009) Community genomic and proteomic analyses of chemoautotrophic iron-oxidizing 'Leptospirillum rubarum' (Group II) and 'Leptospirillum ferrodiazotrophum' (Group III) bacteria in acid mine drainage biofilms. Appl Environ Microbiol 75: 4599-4615.
-
(2009)
Appl Environ Microbiol
, vol.75
, pp. 4599-4615
-
-
Goltsman, D.S.1
Denef, V.J.2
Singer, S.W.3
VerBerkmoes, N.C.4
Lefsrud, M.5
Mueller, R.S.6
-
40
-
-
0042029329
-
Microbial ecology of an extreme acidic environment, the Tinto River
-
Gonzalez-Toril, E., Llobet-Brossa, E., Casamayor, E.O., Amann, R., and Amils, R. (2003) Microbial ecology of an extreme acidic environment, the Tinto River. Appl Environ Microbiol 69: 4853-4865.
-
(2003)
Appl Environ Microbiol
, vol.69
, pp. 4853-4865
-
-
Gonzalez-Toril, E.1
Llobet-Brossa, E.2
Casamayor, E.O.3
Amann, R.4
Amils, R.5
-
42
-
-
0034749892
-
Biodiversity of acidophilic prokaryotes
-
Hallberg, K.B., and Johnson, D.B. (2001) Biodiversity of acidophilic prokaryotes. Adv Appl Microbiol 49: 37-84.
-
(2001)
Adv Appl Microbiol
, vol.49
, pp. 37-84
-
-
Hallberg, K.B.1
Johnson, D.B.2
-
43
-
-
72449149632
-
Physiological and phylogenetic heterogeneity among iron-oxidizing Acidithiobacillus spp., and characteristics of the novel species Acidithiobacillus ferrivorans
-
Hallberg, K.B., Amouric, A., Brochier-Armanet, C., Bonnefoy, V., and Johnson, D.B. (2009) Physiological and phylogenetic heterogeneity among iron-oxidizing Acidithiobacillus spp., and characteristics of the novel species Acidithiobacillus ferrivorans. Adv Mat Res 71-73: 167-170.
-
(2009)
Adv Mat Res
, vol.71-73
, pp. 167-170
-
-
Hallberg, K.B.1
Amouric, A.2
Brochier-Armanet, C.3
Bonnefoy, V.4
Johnson, D.B.5
-
44
-
-
72449137084
-
Acidithiobacillus ferrivorans, sp. nov.; facultatively anaerobic, psychrotolerant iron-, and sulfur-oxidizing acidophiles isolated from metal mine-impacted environments
-
Hallberg, K.B., Gonzalez-Toril, E., and Johnson, D.B. (2010) Acidithiobacillus ferrivorans, sp. nov.; facultatively anaerobic, psychrotolerant iron-, and sulfur-oxidizing acidophiles isolated from metal mine-impacted environments. Extremophiles 14: 9-19.
-
(2010)
Extremophiles
, vol.14
, pp. 9-19
-
-
Hallberg, K.B.1
Gonzalez-Toril, E.2
Johnson, D.B.3
-
45
-
-
67651207865
-
The redox hypothesis in siderophore-mediated iron uptake
-
Harrington, J.M., and Crumbliss, A.L. (2009) The redox hypothesis in siderophore-mediated iron uptake. Biometals 22: 679-689.
-
(2009)
Biometals
, vol.22
, pp. 679-689
-
-
Harrington, J.M.1
Crumbliss, A.L.2
-
46
-
-
0020053764
-
Genomic and physiological diversity amongst strains of Thiobacillus ferrooxidans, and genomic comparison with Thiobacillus thiooxidans
-
Harrison, A.P., Jr (1982) Genomic and physiological diversity amongst strains of Thiobacillus ferrooxidans, and genomic comparison with Thiobacillus thiooxidans. Arch Microbiol 131: 68-76.
-
(1982)
Arch Microbiol
, vol.131
, pp. 68-76
-
-
Harrison Jr., A.P.1
-
47
-
-
73349134931
-
Characterization of an electron conduit between bacteria and the extracellular environment
-
Hartshorne, R.S., Reardon, C.L., Ross, D., Nuester, J., Clarke, T.A., Gates, A.J., etal. (2009) Characterization of an electron conduit between bacteria and the extracellular environment. Proc Natl Acad Sci USA 106: 22169-22174.
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 22169-22174
-
-
Hartshorne, R.S.1
Reardon, C.L.2
Ross, D.3
Nuester, J.4
Clarke, T.A.5
Gates, A.J.6
-
48
-
-
79958159944
-
The iron-oxidizing proteobacteria
-
Hedrich, S., Schlomann, M., and Johnson, D.B. (2011) The iron-oxidizing proteobacteria. Microbiology 157: 1551-1664.
-
(2011)
Microbiology
, vol.157
, pp. 1551-1664
-
-
Hedrich, S.1
Schlomann, M.2
Johnson, D.B.3
-
49
-
-
2342488714
-
Phenazines and other redox-active antibiotics promote microbial mineral reduction
-
Hernandez, M.E., Kappler, A., and Newman, D.K. (2004) Phenazines and other redox-active antibiotics promote microbial mineral reduction. Appl Environ Microbiol 70: 921-928.
-
(2004)
Appl Environ Microbiol
, vol.70
, pp. 921-928
-
-
Hernandez, M.E.1
Kappler, A.2
Newman, D.K.3
-
50
-
-
77951981537
-
Chemistry and biology of siderophores
-
Hider, R.C., and Kong, X. (2010) Chemistry and biology of siderophores. Nat Prod Rep 27: 637-657.
-
(2010)
Nat Prod Rep
, vol.27
, pp. 637-657
-
-
Hider, R.C.1
Kong, X.2
-
51
-
-
84920081702
-
Genetic and bioinformatic insights into iron and sulfur oxidation mechanisms of bioleaching organisms
-
Rawlings, D.E., and Johnson, D.B. (eds). Berlin Heidelberg: Springer-Verlag
-
Holmes, D., and Bonnefoy, V. (2007) Genetic and bioinformatic insights into iron and sulfur oxidation mechanisms of bioleaching organisms. In Biomining. Rawlings, D.E., and Johnson, D.B. (eds). Berlin Heidelberg: Springer-Verlag, pp. 281-307.
-
(2007)
Biomining
, pp. 281-307
-
-
Holmes, D.1
Bonnefoy, V.2
-
52
-
-
0037495183
-
Kinetic rate constant for electron transfer between ferrous ions and novel rusticyanin isoform in Acidithiobacillus ferrooxidans
-
Ida, C., Sasaki, K., Ando, K., Blake, R.C., 2nd, Saiki, H., and Ohmura, N. (2003) Kinetic rate constant for electron transfer between ferrous ions and novel rusticyanin isoform in Acidithiobacillus ferrooxidans. J Biosci Bioeng 95: 534-537.
-
(2003)
J Biosci Bioeng
, vol.95
, pp. 534-537
-
-
Ida, C.1
Sasaki, K.2
Ando, K.3
Blake 2nd, R.C.4
Saiki, H.5
Ohmura, N.6
-
53
-
-
0020372284
-
Thiobacillus ferrooxidans. The bioenergetics of an acidophilic chemolithotroph
-
Ingledew, W.J. (1982) Thiobacillus ferrooxidans. The bioenergetics of an acidophilic chemolithotroph. Biochim Biophys Acta 683: 89-117.
-
(1982)
Biochim Biophys Acta
, vol.683
, pp. 89-117
-
-
Ingledew, W.J.1
-
54
-
-
0023031154
-
Ferrous iron oxidation by Thiobacillus ferrooxidans
-
Ingledew, W.J. (1986) Ferrous iron oxidation by Thiobacillus ferrooxidans. Biotechnol Bioeng Symp 16: 23-33.
-
(1986)
Biotechnol Bioeng Symp
, vol.16
, pp. 23-33
-
-
Ingledew, W.J.1
-
55
-
-
53449100550
-
Proteomics and metaproteomics applied to biomining microorganisms
-
Donati, E.R., and Sand, W. (eds). Dordrecht, the Netherlands: Springer
-
Jerez, C.A. (2007) Proteomics and metaproteomics applied to biomining microorganisms. In Microbial Processing of Metal Sulfides. Donati, E.R., and Sand, W. (eds). Dordrecht, the Netherlands: Springer, pp. 241-251.
-
(2007)
Microbial Processing of Metal Sulfides
, pp. 241-251
-
-
Jerez, C.A.1
-
56
-
-
53449095280
-
The use of genomics, proteomics and other OMICS technologies for the global understanding of biomining microorganisms
-
Jerez, C.A. (2008) The use of genomics, proteomics and other OMICS technologies for the global understanding of biomining microorganisms. Hydrometallurgy 94: 162-169.
-
(2008)
Hydrometallurgy
, vol.94
, pp. 162-169
-
-
Jerez, C.A.1
-
57
-
-
33947358262
-
The pio operon is essential for phototrophic Fe(II) oxidation in Rhodopseudomonas palustris TIE-1
-
Jiao, Y., and Newman, D.K. (2007) The pio operon is essential for phototrophic Fe(II) oxidation in Rhodopseudomonas palustris TIE-1. J Bacteriol 189: 1765-1773.
-
(2007)
J Bacteriol
, vol.189
, pp. 1765-1773
-
-
Jiao, Y.1
Newman, D.K.2
-
58
-
-
0032423975
-
Biodiversity and ecology of acidophilic microorganisms
-
Johnson, D.B. (1998) Biodiversity and ecology of acidophilic microorganisms. FEMS Microbiol Ecol 27: 307-317.
-
(1998)
FEMS Microbiol Ecol
, vol.27
, pp. 307-317
-
-
Johnson, D.B.1
-
59
-
-
37349038016
-
Physiology and ecology of acidophilic microorganisms
-
Gerday, C., and Glansdorff, N. (eds). Washington, DC, USA: ASM press
-
Johnson, D.B. (2007) Physiology and ecology of acidophilic microorganisms. In Physiology and Biochemistry of Extremophiles. Gerday, C., and Glansdorff, N. (eds). Washington, DC, USA: ASM press, pp. 257-269.
-
(2007)
Physiology and Biochemistry of Extremophiles
, pp. 257-269
-
-
Johnson, D.B.1
-
60
-
-
58649102934
-
Biodiversity and interactions of acidophiles: key to understanding and optimizing microbial processing of ores and concentrates
-
Johnson, D.B. (2008) Biodiversity and interactions of acidophiles: key to understanding and optimizing microbial processing of ores and concentrates. T Nonferr Metal Soc 18: 1367-1373.
-
(2008)
T Nonferr Metal Soc
, vol.18
, pp. 1367-1373
-
-
Johnson, D.B.1
-
61
-
-
75249094081
-
Extremophiles: Acidic Environments
-
Schaechter, M. (ed.). Oxford: Elsevier
-
Johnson, D.B. (2009) Extremophiles: Acidic Environments. In Encyclopaedia of Microbiology. Schaechter, M. (ed.). Oxford: Elsevier, pp. 107-126.
-
(2009)
Encyclopaedia of Microbiology
, pp. 107-126
-
-
Johnson, D.B.1
-
62
-
-
0141741231
-
The microbiology of acidic mine waters
-
Johnson, D.B., and Hallberg, K.B. (2003) The microbiology of acidic mine waters. Res Microbiol 154: 466-473.
-
(2003)
Res Microbiol
, vol.154
, pp. 466-473
-
-
Johnson, D.B.1
Hallberg, K.B.2
-
63
-
-
52949105398
-
Carbon, iron and sulfur metabolism in acidophilic micro-organisms
-
Johnson, D.B., and Hallberg, K.B. (2008) Carbon, iron and sulfur metabolism in acidophilic micro-organisms. Adv Microb Physiol 54: 201-255.
-
(2008)
Adv Microb Physiol
, vol.54
, pp. 201-255
-
-
Johnson, D.B.1
Hallberg, K.B.2
-
64
-
-
0035206757
-
Isolation and phylogenetic characterization of acidophilic microorganisms indigenous to acidic drainage waters at an abandoned Norwegian copper mine
-
Johnson, D.B., Rolfe, S., Hallberg, K.B., and Iversen, E. (2001) Isolation and phylogenetic characterization of acidophilic microorganisms indigenous to acidic drainage waters at an abandoned Norwegian copper mine. Environ Microbiol 3: 630-637.
-
(2001)
Environ Microbiol
, vol.3
, pp. 630-637
-
-
Johnson, D.B.1
Rolfe, S.2
Hallberg, K.B.3
Iversen, E.4
-
65
-
-
34248657278
-
Living without Fur: the subtlety and complexity of iron-responsive gene regulation in the symbiotic bacterium Rhizobium and other alpha-proteobacteria
-
Johnston, A.W., Todd, J.D., Curson, A.R., Lei, S., Nikolaidou-Katsaridou, N., Gelfand, M.S., and Rodionov, D.A. (2007) Living without Fur: the subtlety and complexity of iron-responsive gene regulation in the symbiotic bacterium Rhizobium and other alpha-proteobacteria. Biometals 20: 501-511.
-
(2007)
Biometals
, vol.20
, pp. 501-511
-
-
Johnston, A.W.1
Todd, J.D.2
Curson, A.R.3
Lei, S.4
Nikolaidou-Katsaridou, N.5
Gelfand, M.S.6
Rodionov, D.A.7
-
66
-
-
45949109669
-
MEGA: a biologist-centric software for evolutionary analysis of DNA and protein sequences
-
Kumar, S., Nei, M., Dudley, J., and Tamura, K. (2008) MEGA: a biologist-centric software for evolutionary analysis of DNA and protein sequences. Brief Bioinform 9: 299-306.
-
(2008)
Brief Bioinform
, vol.9
, pp. 299-306
-
-
Kumar, S.1
Nei, M.2
Dudley, J.3
Tamura, K.4
-
67
-
-
0026655489
-
Molecular cloning of the gene encoding Thiobacillus ferrooxidans Fe(II) oxidase. High homology of the gene product with HiPIP
-
Kusano, T., Takeshima, T., Sugawara, K., Inoue, C., Shiratori, T., Yano, T., etal. (1992) Molecular cloning of the gene encoding Thiobacillus ferrooxidans Fe(II) oxidase. High homology of the gene product with HiPIP. J Biol Chem 267: 11242-11247.
-
(1992)
J Biol Chem
, vol.267
, pp. 11242-11247
-
-
Kusano, T.1
Takeshima, T.2
Sugawara, K.3
Inoue, C.4
Shiratori, T.5
Yano, T.6
-
68
-
-
72449165371
-
Regulation of expression of the petI operon involved in iron oxidation in the biomining bacterium Acidithiobacillus ferrooxidans
-
Lefimil, C., Osorio, H., Quatrini, R., Holmes, D., and Jedlicki, E. (2009) Regulation of expression of the petI operon involved in iron oxidation in the biomining bacterium Acidithiobacillus ferrooxidans. Adv Mat Res 71-73: 199-202.
-
(2009)
Adv Mat Res
, vol.71-73
, pp. 199-202
-
-
Lefimil, C.1
Osorio, H.2
Quatrini, R.3
Holmes, D.4
Jedlicki, E.5
-
69
-
-
79961139136
-
Draft genome of the psychrotolerant acidophile Acidithiobacillus ferrivorans SS3 provides insights into growth at low temperature by the Acidithiobacilli
-
Liljeqvist, M., Valdes, J., Holmes, D.S., and Dopson, M. (2011) Draft genome of the psychrotolerant acidophile Acidithiobacillus ferrivorans SS3 provides insights into growth at low temperature by the Acidithiobacilli. J Bacteriol 193: 4304-4305.
-
(2011)
J Bacteriol
, vol.193
, pp. 4304-4305
-
-
Liljeqvist, M.1
Valdes, J.2
Holmes, D.S.3
Dopson, M.4
-
70
-
-
34047169728
-
Strain-resolved community proteomics reveals recombining genomes of acidophilic bacteria
-
Lo, I., Denef, V.J., Verberkmoes, N.C., Shah, M.B., Goltsman, D., DiBartolo, G., etal. (2007) Strain-resolved community proteomics reveals recombining genomes of acidophilic bacteria. Nature 446: 537-541.
-
(2007)
Nature
, vol.446
, pp. 537-541
-
-
Lo, I.1
Denef, V.J.2
Verberkmoes, N.C.3
Shah, M.B.4
Goltsman, D.5
DiBartolo, G.6
-
71
-
-
0034997171
-
Microbial community composition and ecology of an acidic aquatic environment: the Tinto river, Spain
-
Lopez-Archilla, A.I., Marin, I., and Amils, R. (2001) Microbial community composition and ecology of an acidic aquatic environment: the Tinto river, Spain. Microb Ecol 41: 20-35.
-
(2001)
Microb Ecol
, vol.41
, pp. 20-35
-
-
Lopez-Archilla, A.I.1
Marin, I.2
Amils, R.3
-
72
-
-
0033068883
-
Humics as an electron donor for anaerobic respiration
-
Lovley, D.R., Fraga, J.L., Coates, J.D., and Blunt-Harris, E.L. (1999) Humics as an electron donor for anaerobic respiration. Environ Microbiol 1: 89-98.
-
(1999)
Environ Microbiol
, vol.1
, pp. 89-98
-
-
Lovley, D.R.1
Fraga, J.L.2
Coates, J.D.3
Blunt-Harris, E.L.4
-
73
-
-
75249090034
-
Production of glycolic acid by chemolithotrophic iron- and sulfur-oxidizing bacteria and its role in delineating and sustaining acidophilic sulfide mineral-oxidizing consortia
-
Nancucheo, I., and Johnson, D.B. (2010) Production of glycolic acid by chemolithotrophic iron- and sulfur-oxidizing bacteria and its role in delineating and sustaining acidophilic sulfide mineral-oxidizing consortia. Appl Environ Microbiol 76: 461-467.
-
(2010)
Appl Environ Microbiol
, vol.76
, pp. 461-467
-
-
Nancucheo, I.1
Johnson, D.B.2
-
74
-
-
0034604081
-
A role for excreted quinones in extracellular electron transfer
-
Newman, D.K., and Kolter, R. (2000) A role for excreted quinones in extracellular electron transfer. Nature 405: 94-97.
-
(2000)
Nature
, vol.405
, pp. 94-97
-
-
Newman, D.K.1
Kolter, R.2
-
75
-
-
65649141219
-
Ferrous iron oxidation and rusticyanin in halotolerant, acidophilic 'Thiobacillus prosperus'
-
Nicolle, J.L.C., Simmons, S., Bathe, S., and Norris, P.R. (2009) Ferrous iron oxidation and rusticyanin in halotolerant, acidophilic 'Thiobacillus prosperus'. Microbiology 155: 1302-1309.
-
(2009)
Microbiology
, vol.155
, pp. 1302-1309
-
-
Nicolle, J.L.C.1
Simmons, S.2
Bathe, S.3
Norris, P.R.4
-
76
-
-
34447504125
-
Acidophile diversity in mineral sulfide oxidation
-
Rawlings, D.E., and Johnson, D.B. (eds). Berlin Heidelberg: Springer-Verlag
-
Norris, P.R. (2007) Acidophile diversity in mineral sulfide oxidation. In Biomining. Rawlings, D.E., and Johnson, D.B. (eds). Berlin Heidelberg: Springer-Verlag, pp. 199-216.
-
(2007)
Biomining
, pp. 199-216
-
-
Norris, P.R.1
-
77
-
-
4243371919
-
Aporusticyanin mediates the adhesion of Thiobacillus ferrooxidans to pyrite
-
Foundation, A.M. (ed.). Sydney, Australia: Australian Mineral Foundation
-
Ohmura, N., and Blake, R.C. (1997) Aporusticyanin mediates the adhesion of Thiobacillus ferrooxidans to pyrite. In IBS Biomine. Foundation, A.M. (ed.). Sydney, Australia: Australian Mineral Foundation, pp. PB1.1-PB1.10.
-
(1997)
IBS Biomine
-
-
Ohmura, N.1
Blake, R.C.2
-
78
-
-
58249106634
-
Microbial iron management mechanisms in extremely acidic environments: comparative genomics evidence for diversity and versatility
-
Osorio, H., Martinez, V., Nieto, P.A., Holmes, D.S., and Quatrini, R. (2008) Microbial iron management mechanisms in extremely acidic environments: comparative genomics evidence for diversity and versatility. BMC Microbiol 8: 203.
-
(2008)
BMC Microbiol
, vol.8
, pp. 203
-
-
Osorio, H.1
Martinez, V.2
Nieto, P.A.3
Holmes, D.S.4
Quatrini, R.5
-
79
-
-
72449169512
-
Prediction of Fnr regulated genes and metabolic pathways potentially involved in anaerobic growth of Acidithiobacillus ferrooxidans
-
Osorio, H., Cárdenas, J.P., Valdés, J., and Holmes, D.S. (2009) Prediction of Fnr regulated genes and metabolic pathways potentially involved in anaerobic growth of Acidithiobacillus ferrooxidans. Adv Mat Res 71-73: 195-198.
-
(2009)
Adv Mat Res
, vol.71-73
, pp. 195-198
-
-
Osorio, H.1
Cárdenas, J.P.2
Valdés, J.3
Holmes, D.S.4
-
80
-
-
33846110892
-
Analysis of environmental transcriptomes by DNA microarrays
-
Parro, V., Moreno-Paz, M., and Gonzalez-Toril, E. (2007) Analysis of environmental transcriptomes by DNA microarrays. Environ Microbiol 9: 453-464.
-
(2007)
Environ Microbiol
, vol.9
, pp. 453-464
-
-
Parro, V.1
Moreno-Paz, M.2
Gonzalez-Toril, E.3
-
81
-
-
78650371091
-
Iron homeostasis and responses to iron limitation in extreme acidophiles from the Ferroplasma genus
-
Potrykus, J., Jonna, V.R., and Dopson, M. (2011) Iron homeostasis and responses to iron limitation in extreme acidophiles from the Ferroplasma genus. Proteomics 11: 52-63.
-
(2011)
Proteomics
, vol.11
, pp. 52-63
-
-
Potrykus, J.1
Jonna, V.R.2
Dopson, M.3
-
82
-
-
28644432715
-
Genomic insights into the iron uptake mechanisms of the biomining microorganism Acidithiobacillus ferrooxidans
-
Quatrini, R., Jedlicki, E., and Holmes, D.S. (2005a) Genomic insights into the iron uptake mechanisms of the biomining microorganism Acidithiobacillus ferrooxidans. J Ind Microbiol Biotechnol 32: 606-614.
-
(2005)
J Ind Microbiol Biotechnol
, vol.32
, pp. 606-614
-
-
Quatrini, R.1
Jedlicki, E.2
Holmes, D.S.3
-
83
-
-
21344451201
-
The ferric iron uptake regulator (Fur) from the extreme acidophile Acidithiobacillus ferrooxidans
-
Quatrini, R., Lefimil, C., Holmes, D.S., and Jedlicki, E. (2005b) The ferric iron uptake regulator (Fur) from the extreme acidophile Acidithiobacillus ferrooxidans. Microbiology 151: 2005-2015.
-
(2005)
Microbiology
, vol.151
, pp. 2005-2015
-
-
Quatrini, R.1
Lefimil, C.2
Holmes, D.S.3
Jedlicki, E.4
-
84
-
-
53249156742
-
The use of bioinformatics and genomic biology to advance our understanding of bioleaching microorganisms
-
Donati, E.R., and Sand, W. (eds). Dordrecht, the Netherlands: Springer
-
Quatrini, R., Valdes, J., Jedlicki, E., and Holmes, D.S. (2007a) The use of bioinformatics and genomic biology to advance our understanding of bioleaching microorganisms. In Microbial Processing of Metal Sulfides. Donati, E.R., and Sand, W. (eds). Dordrecht, the Netherlands: Springer, pp. 221-239.
-
(2007)
Microbial Processing of Metal Sulfides
, pp. 221-239
-
-
Quatrini, R.1
Valdes, J.2
Jedlicki, E.3
Holmes, D.S.4
-
85
-
-
34249844266
-
Bioinformatic prediction and experimental verification of Fur-regulated genes in the extreme acidophile Acidithiobacillus ferrooxidans
-
Quatrini, R., Lefimil, C., Veloso, F.A., Pedroso, I., Holmes, D.S., and Jedlicki, E. (2007b) Bioinformatic prediction and experimental verification of Fur-regulated genes in the extreme acidophile Acidithiobacillus ferrooxidans. Nucleic Acids Res 35: 2153-2166.
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 2153-2166
-
-
Quatrini, R.1
Lefimil, C.2
Veloso, F.A.3
Pedroso, I.4
Holmes, D.S.5
Jedlicki, E.6
-
86
-
-
70350445731
-
Extending the models for iron and sulfur oxidation in the extreme acidophile Acidithiobacillus ferrooxidans
-
Quatrini, R., Appia-Ayme, C., Denis, Y., Jedlicki, E., Holmes, D.S., and Bonnefoy, V. (2009) Extending the models for iron and sulfur oxidation in the extreme acidophile Acidithiobacillus ferrooxidans. BMC Genomics 10: 394.
-
(2009)
BMC Genomics
, vol.10
, pp. 394
-
-
Quatrini, R.1
Appia-Ayme, C.2
Denis, Y.3
Jedlicki, E.4
Holmes, D.S.5
Bonnefoy, V.6
-
87
-
-
21344465408
-
Community proteomics of a natural microbial biofilm
-
Ram, R.J., Verberkmoes, N.C., Thelen, M.P., Tyson, G.W., Baker, B.J., Blake, R.C., 2nd, etal. (2005) Community proteomics of a natural microbial biofilm. Science 308: 1915-1920.
-
(2005)
Science
, vol.308
, pp. 1915-1920
-
-
Ram, R.J.1
Verberkmoes, N.C.2
Thelen, M.P.3
Tyson, G.W.4
Baker, B.J.5
Blake 2nd, R.C.6
-
88
-
-
0036405454
-
Heavy metal mining using microbes
-
Rawlings, D.E. (2002) Heavy metal mining using microbes. Annu Rev Microbiol 56: 65-91.
-
(2002)
Annu Rev Microbiol
, vol.56
, pp. 65-91
-
-
Rawlings, D.E.1
-
89
-
-
26844536951
-
Characteristics and adaptability of iron- and sulfur-oxidizing microorganisms used for the recovery of metals from minerals and their concentrates
-
Rawlings, D.E. (2005) Characteristics and adaptability of iron- and sulfur-oxidizing microorganisms used for the recovery of metals from minerals and their concentrates. Microb Cell Fact 4: 13.
-
(2005)
Microb Cell Fact
, vol.4
, pp. 13
-
-
Rawlings, D.E.1
-
90
-
-
73949157719
-
Relevance of cell physiology and genetic adaptability of biomining microorganisms to industrial processes
-
Rawlings, D.E., and Johnson, D.B. (eds). Berlin Heidelberg: Springer-Verlag
-
Rawlings, D.E. (2007) Relevance of cell physiology and genetic adaptability of biomining microorganisms to industrial processes. In Biomining. Rawlings, D.E., and Johnson, D.B. (eds). Berlin Heidelberg: Springer-Verlag, pp. 177-198.
-
(2007)
Biomining
, pp. 177-198
-
-
Rawlings, D.E.1
-
91
-
-
33847195791
-
The microbiology of biomining: development and optimization of mineral-oxidizing microbial consortia
-
Rawlings, D.E., and Johnson, D.B. (2007) The microbiology of biomining: development and optimization of mineral-oxidizing microbial consortia. Microbiology 153: 315-324.
-
(2007)
Microbiology
, vol.153
, pp. 315-324
-
-
Rawlings, D.E.1
Johnson, D.B.2
-
92
-
-
32044462938
-
Extracellular polymeric substances mediate bioleaching/biocorrosion via interfacial processes involving iron(III) ions and acidophilic bacteria
-
Sand, W., and Gehrke, T. (2006) Extracellular polymeric substances mediate bioleaching/biocorrosion via interfacial processes involving iron(III) ions and acidophilic bacteria. Res Microbiol 157: 49-56.
-
(2006)
Res Microbiol
, vol.157
, pp. 49-56
-
-
Sand, W.1
Gehrke, T.2
-
93
-
-
0038152235
-
Respiratory isozyme, two types of rusticyanin of Acidithiobacillus ferrooxidans
-
Sasaki, K., Ida, C., Ando, A., Matsumoto, N., Saiki, H., and Ohmura, N. (2003) Respiratory isozyme, two types of rusticyanin of Acidithiobacillus ferrooxidans. Biosci Biotechnol Biochem 67: 1039-1047.
-
(2003)
Biosci Biotechnol Biochem
, vol.67
, pp. 1039-1047
-
-
Sasaki, K.1
Ida, C.2
Ando, A.3
Matsumoto, N.4
Saiki, H.5
Ohmura, N.6
-
94
-
-
84892195463
-
Microorganisms involved in bioleaching and nucleic acid-based molecular methods for their identification and quantification
-
Donati, E.R., and Sand, W. (eds). Dordrecht, the Netherlands: Springer
-
Schippers, A. (2007) Microorganisms involved in bioleaching and nucleic acid-based molecular methods for their identification and quantification. In Microbial Processing of Metal Sulfides. Donati, E.R., and Sand, W. (eds). Dordrecht, the Netherlands: Springer, pp. 3-33.
-
(2007)
Microbial Processing of Metal Sulfides
, pp. 3-33
-
-
Schippers, A.1
-
95
-
-
77957757041
-
The biochemistry and microbiology of sulfidic mine waste and bioleaching dumps and heaps, and novel Fe(II)-oxidizing bacteria
-
Schippers, A., Breuker, A., Blazejak, A., Bosecker, K., Kock, D., and Wright, T.L. (2010) The biochemistry and microbiology of sulfidic mine waste and bioleaching dumps and heaps, and novel Fe(II)-oxidizing bacteria. Hydrometallurgy 104: 342-350.
-
(2010)
Hydrometallurgy
, vol.104
, pp. 342-350
-
-
Schippers, A.1
Breuker, A.2
Blazejak, A.3
Bosecker, K.4
Kock, D.5
Wright, T.L.6
-
97
-
-
48349103531
-
Population genomic analysis of strain variation in Leptospirillum group II bacteria involved in acid mine drainage formation
-
Simmons, S.L., Dibartolo, G., Denef, V.J., Goltsman, D.S., Thelen, M.P., and Banfield, J.F. (2008) Population genomic analysis of strain variation in Leptospirillum group II bacteria involved in acid mine drainage formation. PLoS Biol 6: e177.
-
(2008)
PLoS Biol
, vol.6
-
-
Simmons, S.L.1
Dibartolo, G.2
Denef, V.J.3
Goltsman, D.S.4
Thelen, M.P.5
Banfield, J.F.6
-
98
-
-
77958494387
-
Posttranslational modification and sequence variation of redox-active proteins correlate with biofilm life cycle in natural microbial communities
-
Singer, S.W., Erickson, B.K., VerBerkmoes, N.C., Hwang, M., Shah, M.B., Hettich, R.L., etal. (2010) Posttranslational modification and sequence variation of redox-active proteins correlate with biofilm life cycle in natural microbial communities. ISME J 4: 1398-1409.
-
(2010)
ISME J
, vol.4
, pp. 1398-1409
-
-
Singer, S.W.1
Erickson, B.K.2
VerBerkmoes, N.C.3
Hwang, M.4
Shah, M.B.5
Hettich, R.L.6
-
99
-
-
0033985228
-
Iron and oxidative stress in bacteria
-
Touati, D. (2000) Iron and oxidative stress in bacteria. Arch Biochem Biophys 373: 1-6.
-
(2000)
Arch Biochem Biophys
, vol.373
, pp. 1-6
-
-
Touati, D.1
-
100
-
-
1542377296
-
Community structure and metabolism through reconstruction of microbial genomes from the environment
-
Tyson, G.W., Chapman, J., Hugenholtz, P., Allen, E.E., Ram, R.J., Richardson, P.M., etal. (2004) Community structure and metabolism through reconstruction of microbial genomes from the environment. Nature 428: 37-43.
-
(2004)
Nature
, vol.428
, pp. 37-43
-
-
Tyson, G.W.1
Chapman, J.2
Hugenholtz, P.3
Allen, E.E.4
Ram, R.J.5
Richardson, P.M.6
-
101
-
-
58249113952
-
Acidithiobacillus ferrooxidans metabolism: from genome sequence to industrial applications
-
Valdes, J., Pedroso, I., Quatrini, R., Dodson, R.J., Tettelin, H., Blake, R., 2nd, etal. (2008) Acidithiobacillus ferrooxidans metabolism: from genome sequence to industrial applications. BMC Genomics 9: 597.
-
(2008)
BMC Genomics
, vol.9
, pp. 597
-
-
Valdes, J.1
Pedroso, I.2
Quatrini, R.3
Dodson, R.J.4
Tettelin, H.5
Blake 2nd, R.6
-
102
-
-
31744442914
-
Genomics, metagenomics and proteomics in biomining microorganisms
-
Valenzuela, L., Chi, A., Beard, S., Orell, A., Guiliani, N., Shabanowitz, J., etal. (2006) Genomics, metagenomics and proteomics in biomining microorganisms. Biotechnol Adv 24: 197-211.
-
(2006)
Biotechnol Adv
, vol.24
, pp. 197-211
-
-
Valenzuela, L.1
Chi, A.2
Beard, S.3
Orell, A.4
Guiliani, N.5
Shabanowitz, J.6
-
103
-
-
41649111954
-
Redox reactions of phenazine antibiotics with ferric (hydr)oxides and molecular oxygen
-
Wangt, Y., and Newman, D.K. (2008) Redox reactions of phenazine antibiotics with ferric (hydr)oxides and molecular oxygen. Environ Sci Technol 42: 2380-2386.
-
(2008)
Environ Sci Technol
, vol.42
, pp. 2380-2386
-
-
Wangt, Y.1
Newman, D.K.2
-
104
-
-
33748853295
-
Microorganisms pumping iron: anaerobic microbial iron oxidation and reduction
-
Weber, K.A., Achenbach, L.A., and Coates, J.D. (2006) Microorganisms pumping iron: anaerobic microbial iron oxidation and reduction. Nat Rev Microbiol 4: 752-764.
-
(2006)
Nat Rev Microbiol
, vol.4
, pp. 752-764
-
-
Weber, K.A.1
Achenbach, L.A.2
Coates, J.D.3
-
105
-
-
77951062024
-
Phylogeny of gammaproteobacteria
-
Williams, K.P., Gillespie, J.J., Sobral, B.W., Nordberg, E.K., Snyder, E.E., Shallom, J.M., and Dickerman, A.W. (2010) Phylogeny of gammaproteobacteria. J Bacteriol 192: 2305-2314.
-
(2010)
J Bacteriol
, vol.192
, pp. 2305-2314
-
-
Williams, K.P.1
Gillespie, J.J.2
Sobral, B.W.3
Nordberg, E.K.4
Snyder, E.E.5
Shallom, J.M.6
Dickerman, A.W.7
-
106
-
-
55949136931
-
RegB/RegA, a global redox-responding two-component system
-
Wu, J., and Bauer, C.E. (2008) RegB/RegA, a global redox-responding two-component system. Adv Exp Med Biol 631: 131-148.
-
(2008)
Adv Exp Med Biol
, vol.631
, pp. 131-148
-
-
Wu, J.1
Bauer, C.E.2
-
107
-
-
4344634473
-
Regulation of the expression of the Acidithiobacillus ferrooxidans rus operon encoding two cytochromes c, a cytochrome oxidase and rusticyanin
-
Yarzabal, A., Appia-Ayme, C., Ratouchniak, J., and Bonnefoy, V. (2004) Regulation of the expression of the Acidithiobacillus ferrooxidans rus operon encoding two cytochromes c, a cytochrome oxidase and rusticyanin. Microbiology 150: 2113-2123.
-
(2004)
Microbiology
, vol.150
, pp. 2113-2123
-
-
Yarzabal, A.1
Appia-Ayme, C.2
Ratouchniak, J.3
Bonnefoy, V.4
|