-
1
-
-
33846923050
-
Genome dynamics in a natural archaeal population
-
DOI 10.1073/pnas.0604851104
-
Allen, E.E., Tyson, G.W., Whitaker, R.J., Detter, J.C., Richardson, P.M., and Banfield, J.F. (2007) Genome dynamics in a natural archaeal population. Proc Natl Acad Sci USA 104: 1883-1888. (Pubitemid 46239873)
-
(2007)
Proceedings of the National Academy of Sciences of the United States of America
, vol.104
, Issue.6
, pp. 1883-1888
-
-
Allen, E.E.1
Tyson, G.W.2
Whitaker, R.J.3
Detter, J.C.4
Richardson, P.M.5
Banfield, J.F.6
-
2
-
-
57449106295
-
Identification of components of electron transport chains in the extremely thermoacidophilic crenarchaeon Metallosphaera sedula through iron and sulfur compound oxidation transcriptomes
-
Auernik, K.S., and Kelly, R.M. (2008) Identification of components of electron transport chains in the extremely thermoacidophilic crenarchaeon Metallosphaera sedula through iron and sulfur compound oxidation transcriptomes. Appl Environ Microbiol 74: 7723-7732.
-
(2008)
Appl Environ Microbiol
, vol.74
, pp. 7723-7732
-
-
Auernik, K.S.1
Kelly, R.M.2
-
3
-
-
38949170756
-
The genome sequence of the metal-mobilizing, extremely thermoacidophilic archaeon Metallosphaera sedula provides insights into bioleaching-associated metabolism
-
DOI 10.1128/AEM.02019-07
-
Auernik, K.S., Maezato, Y., Blum, P.H., and Kelly, R.M. (2008a) The genome sequence of the metal-mobilizing, extremely thermoacidophilic archaeon Metallosphaera sedula provides insights into bioleaching-associated metabolism. Appl Environ Microbiol 74: 682-692. (Pubitemid 351225719)
-
(2008)
Applied and Environmental Microbiology
, vol.74
, Issue.3
, pp. 682-692
-
-
Auernik, K.S.1
Maezato, Y.2
Blum, P.H.3
Kelly, R.M.4
-
4
-
-
54849371000
-
Life in hot acid: Pathway analyses in extremely thermoacidophilic archaea
-
Auernik, K.S., Cooper, C.R., and Kelly, R.M. (2008b) Life in hot acid: pathway analyses in extremely thermoacidophilic archaea. Curr Opin Biotechnol 19: 445-453.
-
(2008)
Curr Opin Biotechnol
, vol.19
, pp. 445-453
-
-
Auernik, K.S.1
Cooper, C.R.2
Kelly, R.M.3
-
5
-
-
32444438519
-
The genome sequence of the obligately chemolithoautotrophic, facultatively anaerobic bacterium Thiobacillus denitrificans
-
DOI 10.1128/JB.188.4.1473-1488.2006
-
Beller, H.R., Chain, P.S., Letain, T.E., Chakicherla, A., Larimer, F.W., Richardson, P.M., et al. (2006) The genome sequence of the obligately chemolithoautotrophic, facultatively anaerobic bacterium Thiobacillus denitrificans. J Bacteriol 188: 1473-1488. (Pubitemid 43228681)
-
(2006)
Journal of Bacteriology
, vol.188
, Issue.4
, pp. 1473-1488
-
-
Beller, H.R.1
Chain, P.S.G.2
Letain, T.E.3
Chakicherla, A.4
Larimer, F.W.5
Richardson, P.M.6
Coleman, M.A.7
Wood, A.P.8
Kelly, D.P.9
-
6
-
-
21844477811
-
The genome of Sulfolobus acidocaldarius, a model organism of the Crenarchaeota
-
DOI 10.1128/JB.187.14.4992-4999.2005
-
Chen, L., Brugger, K., Skovgaard, M., Redder, P., She, Q., Torarinsson, E., et al. (2005) The genome of Sulfolobus acidocaldarius, a model organism of the Crenarchaeota. J Bacteriol 187: 4992-4999. (Pubitemid 40962217)
-
(2005)
Journal of Bacteriology
, vol.187
, Issue.14
, pp. 4992-4999
-
-
Chen, L.1
Brugger, K.2
Skovgaard, M.3
Redder, P.4
She, Q.5
Torarinsson, E.6
Greve, B.7
Awayez, M.8
Zibat, A.9
Klenk, H.-P.10
Garrett, R.A.11
-
7
-
-
38349019880
-
Periplasmic proteins of the extremophile Acidithiobacillus ferrooxidans: A high throughput proteomics analysis
-
Chi, A., Valenzuela, L., Beard, S., Mackey, A.J., Shabanowitz, J., Hunt, D.F., and Jerez, C.A. (2007) Periplasmic proteins of the extremophile Acidithiobacillus ferrooxidans: a high throughput proteomics analysis. Mol Cell Proteomics 6: 2239-2251.
-
(2007)
Mol Cell Proteomics
, vol.6
, pp. 2239-2251
-
-
Chi, A.1
Valenzuela, L.2
Beard, S.3
Mackey, A.J.4
Shabanowitz, J.5
Hunt, D.F.6
Jerez, C.A.7
-
8
-
-
50549089039
-
Metallurgical recovery of metals from electronic waste: A review
-
Cui, J., and Zhang, L. (2008) Metallurgical recovery of metals from electronic waste: a review. J Hazard Mater 158: 228-256.
-
(2008)
J Hazard Mater
, vol.158
, pp. 228-256
-
-
Cui, J.1
Zhang, L.2
-
9
-
-
40949106451
-
An oligonucleotide prokaryotic acidophile microarray: Its validation and its use to monitor seasonal variations in extreme acidic environments with total environmental RNA
-
Garrido, P., Gonzalez-Toril, E., Garcia-Moyano, A., Moreno-Paz, M., Amils, R., and Parro, V. (2008) An oligonucleotide prokaryotic acidophile microarray: its validation and its use to monitor seasonal variations in extreme acidic environments with total environmental RNA. Environ Microbiol 10: 836-850.
-
(2008)
Environ Microbiol
, vol.10
, pp. 836-850
-
-
Garrido, P.1
Gonzalez-Toril, E.2
Garcia-Moyano, A.3
Moreno-Paz, M.4
Amils, R.5
Parro, V.6
-
10
-
-
63549085483
-
A stoichiometric model of Acidithiobacillus ferrooxidans ATCC 23270 for metabolic flux analysis
-
Hold, C., Andrews, B.A., and Asenjo, J.A. (2009) A stoichiometric model of Acidithiobacillus ferrooxidans ATCC 23270 for metabolic flux analysis. Biotechnol Bioeng 102: 1448-1459
-
(2009)
Biotechnol Bioeng
, vol.102
, pp. 1448-1459
-
-
Hold, C.1
Andrews, B.A.2
Asenjo, J.A.3
-
11
-
-
73949090787
-
Carbon, iron and sulfur metabolism in acidophilic micro-organisms
-
Poole, R.K. (ed.). Academic Press
-
Johnson, D.B., and Hallberg, K.B. (2009) Carbon, iron and sulfur metabolism in acidophilic micro-organisms. In Prin-ciples of the Magnetic Methods in Geophysics. Poole, R.K. (ed.). Academic Press, pp. 201-255.
-
(2009)
Principles of the Magnetic Methods in Geophysics
, pp. 201-255
-
-
Johnson, D.B.1
Hallberg, K.B.2
-
12
-
-
0035980098
-
Complete genome sequence of an aerobic thermoacidophilic crenarchaeon, Sulfolobus tokodaii strain
-
Kawarabayasi, Y., Hino, Y., Horikawa, H., Jin-no, K., Takahashi, M., Sekine, M., et al. (2001) Complete genome sequence of an aerobic thermoacidophilic crenarchaeon, Sulfolobus tokodaii strain7. DNA Res 8: 123-140. (Pubitemid 33622676)
-
(2001)
DNA Research
, vol.8
, Issue.4
, pp. 123-140
-
-
Kawarabayasi, Y.1
Hino, Y.2
Horikawa, H.3
Jin-No, K.4
Takahashi, M.5
Sekine, M.6
Baba, S.-I.7
Ankai, A.8
Kosugi, H.9
Hosoyama, A.10
Fukui, S.11
Nagai, Y.12
Nishijima, K.13
Otsuka, R.14
Nakazawa, H.15
Takamiya, M.16
Kato, Y.17
Yoshizawa, T.18
Tanaka, T.19
Kudoh, Y.20
Yamazaki, J.21
Kushida, N.22
Oguchi, A.23
Aoki, K.-I.24
Masuda, S.25
Yanagii, M.26
Nishimura, M.27
Yamagishi, A.28
Oshima, T.29
Kikuchi, H.30
more..
-
14
-
-
58249106634
-
Microbial iron management mechanisms in extremely acidic environments: Comparative genomics evidence for diversity and versatility
-
Osorio, H., Martinez, V., Nieto, P.A., Holmes, D.S., and Quatrini, R. (2008a) Microbial iron management mechanisms in extremely acidic environments: comparative genomics evidence for diversity and versatility. BMC Microbiol 8: 203.
-
(2008)
BMC Microbiol
, vol.8
, pp. 203
-
-
Osorio, H.1
Martinez, V.2
Nieto, P.A.3
Holmes, D.S.4
Quatrini, R.5
-
15
-
-
53249098495
-
Iron homeostasis strategies in acidophilic iron oxidizers: Studies in Acidithiobacillus and Leptospirillum
-
Osorio, H., Martínez, V., Veloso, F.A., Pedrosoa, I., Valdés, J., Jedlicki, E., et al. (2008b) Iron homeostasis strategies in acidophilic iron oxidizers: studies in Acidithiobacillus and Leptospirillum. Hydrometallurgy 94: 175-179.
-
(2008)
Hydrometallurgy
, vol.94
, pp. 175-179
-
-
Osorio, H.1
Martínez, V.2
Veloso, F.A.3
Pedrosoa, I.4
Valdés, J.5
Jedlicki, E.6
-
16
-
-
58049120497
-
SOLID2: An antibody array-based life-detector instrument in a Mars Drilling Simulation Experiment (MARTE)
-
Parro, V., Fernandez-Calvo, P., Rodriguez Manfredi, J.A., Moreno-Paz, M., Rivas, L.A., Garcia-Villadangos, M., et al. (2008) SOLID2: an antibody array-based life-detector instrument in a Mars Drilling Simulation Experiment (MARTE). Astrobiology 8: 987-999.
-
(2008)
Astrobiology
, vol.8
, pp. 987-999
-
-
Parro, V.1
Fernandez-Calvo, P.2
Rodriguez Manfredi, J.A.3
Moreno-Paz, M.4
Rivas, L.A.5
Garcia-Villadangos, M.6
-
17
-
-
0036405454
-
Heavy metal mining using microbes
-
DOI 10.1146/annurev.micro.56.012302.161052
-
Rawlings, D.E. (2002) Heavy metal mining using microbes. Annu Rev Microbiol 56: 65-91. (Pubitemid 35217448)
-
(2002)
Annual Review of Microbiology
, vol.56
, pp. 65-91
-
-
Rawlings, D.E.1
-
18
-
-
26844536951
-
Characteristics and adaptability of iron- and sulfur-oxidizing microorganisms used for the recovery of metals from minerals and their concentrates
-
Rawlings, D.E. (2005) Characteristics and adaptability of iron- and sulfur-oxidizing microorganisms used for the recovery of metals from minerals and their concentrates. Microb Cell Fact 4: 13.
-
(2005)
Microb Cell Fact
, vol.4
, pp. 13
-
-
Rawlings, D.E.1
-
19
-
-
33847195791
-
The microbiology of biomining: Development and optimization of mineral-oxidizing microbial consortia
-
DOI 10.1099/mic.0.2006/001206-0
-
Rawlings, D.E., and Johnson, D.B. (2007) The microbiology of biomining: development and optimization of mineraloxidizing microbial consortia. Microbiology 153: 315-324. (Pubitemid 46306479)
-
(2007)
Microbiology
, vol.153
, Issue.2
, pp. 315-324
-
-
Rawlings, D.E.1
Johnson, D.B.2
-
20
-
-
0037212781
-
Biomineralization of metal-containing ores and concentrates
-
Rawlings, D.E., Dew, D., and du Plessis, C. (2003) Biomineralization of metal-containing ores and concentrates. Trends Biotechnol 21: 38-44.
-
(2003)
Trends Biotechnol
, vol.21
, pp. 38-44
-
-
Rawlings, D.E.1
Dew, D.2
Du Plessis, C.3
-
21
-
-
63049100194
-
Complete and draft genome sequences of six members of the Aquificales
-
Reysenbach, A.L., Hamamura, N., Podar, M., Griffiths, E., Ferreira, S., Hochstein, R., et al. (2009) Complete and draft genome sequences of six members of the Aquificales. J Bacteriol 191: 1992-1993.
-
(2009)
J Bacteriol
, vol.191
, pp. 1992-1993
-
-
Reysenbach, A.L.1
Hamamura, N.2
Podar, M.3
Griffiths, E.4
Ferreira, S.5
Hochstein, R.6
-
22
-
-
0034945083
-
The complete genome of the crenarchaeon Sulfolobus solfataricus P2
-
DOI 10.1073/pnas.141222098
-
She, Q., Singh, R.K., Confalonieri, F., Zivanovic, Y., Allard, G., Awayez, M.J., et al. (2001) The complete genome of the crenarchaeon Sulfolobus solfataricus. Proc Natl Acad Sci USA 98: 7835-7840. (Pubitemid 32642647)
-
(2001)
Proceedings of the National Academy of Sciences of the United States of America
, vol.98
, Issue.14
, pp. 7835-7840
-
-
She, Q.1
Singh, R.K.2
Confalonieri, F.3
Zivanovic, Y.4
Allard, G.5
Awayez, M.J.6
Chan-Weiher, C.C.-Y.7
Clausen, I.G.8
Curtis, B.A.9
De Moors, A.10
Erauso, G.11
Fletcher, C.12
Gordon, P.M.K.13
Heikamp-de Jong, I.14
Jeffries, A.C.15
Kozera, C.J.16
Medina, N.17
Peng, X.18
Thi-Ngoc, H.P.19
Redder, P.20
Schenk, M.E.21
Theriault, C.22
Tolstrup, N.23
Charlebois, R.L.24
Doolittle, W.F.25
Duguet, M.26
Gaasterland, T.27
Garrett, R.A.28
Ragan, M.A.29
Sensen, C.W.30
Van Der Oostg, J.31
more..
-
23
-
-
39649088960
-
Genome of the epsilonproteobacterial chemolithoautotroph Sulfurimonas denitrificans
-
DOI 10.1128/AEM.01844-07
-
Sievert, S.M., Scott, K.M., Klotz, M.G., Chain, P.S., Hauser, L.J., Hemp, J., et al. (2008) Genome of the epsilonproteobacterial chemolithoautotroph Sulfurimonas denitrificans. Appl Environ Microbiol 74: 1145-1156. (Pubitemid 351287086)
-
(2008)
Applied and Environmental Microbiology
, vol.74
, Issue.4
, pp. 1145-1156
-
-
Sievert, S.M.1
Scott, K.M.2
Klotz, M.G.3
Chain, P.S.G.4
Hauser, L.J.5
Hemp, J.6
Hugler, M.7
Land, M.8
Lapidus, A.9
Larimer, F.W.10
Lucas, S.11
Malfatti, S.A.12
Meyer, F.13
Paulsen, I.T.14
Ren, Q.15
Simon, J.16
Bailey, K.17
Diaz, E.18
Fitzpatrick, K.A.19
Glover, B.20
Gwatney, N.21
Korajkic, A.22
Long, A.23
Mobberley, J.M.24
Pantry, S.N.25
Pazder, G.26
Peterson, S.27
Quintanilla, J.D.28
Sprinkle, R.29
Stephens, J.30
Thomas, P.31
Vaughn, R.32
Weber, M.J.33
Wooten, L.L.34
more..
-
24
-
-
77953597603
-
Genomics of biological wastewater treatment. Microbial Biotechnology 1: 333-340. Suzuki, I. (2001) Microbial leaching of metals from sulfide minerals
-
Siezen, R.J., and Galardini, M. (2008) Genomics of biological wastewater treatment. Microbial Biotechnology 1: 333-340. Suzuki, I. (2001) Microbial leaching of metals from sulfide minerals. Biotechnol Adv 19: 119-132.
-
(2008)
Biotechnol Adv
, vol.19
, pp. 119-132
-
-
Siezen, R.J.1
Galardini, M.2
-
25
-
-
1542377296
-
Community structure and metabolism through reconstruction of microbial genomes from the environment
-
DOI 10.1038/nature02340
-
Tyson, G.W., Chapman, J., Hugenholtz, P., Allen, E.E., Ram, R.J., Richardson, P.M., et al. (2004) Community structure and metabolism through reconstruction of microbial genomes from the environment. Nature 428: 37-43. (Pubitemid 38332350)
-
(2004)
Nature
, vol.428
, Issue.6978
, pp. 37-43
-
-
Tyson, G.W.1
Chapman, J.2
Hugenholtz, P.3
Allen, E.E.4
Ram, R.J.5
Richardson, P.M.6
Solovyev, V.V.7
Rubin, E.M.8
Rokhsar, D.S.9
Banfield, J.F.10
-
26
-
-
58249113952
-
Acidithiobacillus ferrooxidans metabolism: From genome sequence to industrial applications
-
Valdes, J., Pedroso, I., Quatrini, R., Dodson, R.J., Tettelin, H., Blake, R., 2nd, et al. (2008a) Acidithiobacillus ferrooxidans metabolism: from genome sequence to industrial applications. BMC Genomics 9: 597.
-
(2008)
BMC Genomics
, vol.9
, pp. 597
-
-
Valdes, J.1
Pedroso, I.2
Quatrini, R.3
Dodson, R.J.4
Tettelin, H.5
Blake II, R.6
-
27
-
-
53249090240
-
Comparative genome analysis of Acidithiobacillus ferrooxidans, A. thiooxidans and A. caldus: Insights into their metabolism and ecophysiology
-
Valdes, J., Pedrosoa, I., Quatrini, R., and Holmes, D.S. (2008b) Comparative genome analysis of Acidithiobacillus ferrooxidans, A. thiooxidans and A. caldus: insights into their metabolism and ecophysiology. Hydrometallurgy 94: 180-184.
-
(2008)
Hydrometallurgy
, vol.94
, pp. 180-184
-
-
Valdes, J.1
Pedrosoa, I.2
Quatrini, R.3
Holmes, D.S.4
-
28
-
-
31744442914
-
Genomics, metagenomics and proteomics in biomining microorganisms
-
DOI 10.1016/j.biotechadv.2005.09.004, PII S0734975005001230
-
Valenzuela, L., Chi, A., Beard, S., Orell, A., Guiliani, N., Shabanowitz, J., et al. (2006) Genomics, metagenomics and proteomics in biomining microorganisms. Biotechnol Adv 24: 197-211. (Pubitemid 43173509)
-
(2006)
Biotechnology Advances
, vol.24
, Issue.2
, pp. 197-211
-
-
Valenzuela, L.1
Chi, A.2
Beard, S.3
Orell, A.4
Guiliani, N.5
Shabanowitz, J.6
Hunt, D.F.7
Jerez, C.A.8
|