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Volumn 55, Issue 1, 2012, Pages 81-91

Population Genetic Structure of the Endangered Brasenia schreberi in South Korea Based on Nuclear Ribosomal Spacer and Chloroplast DNA Sequences

Author keywords

Brasenia schreberi; Conservation; Endangered plant; Genetic differentiation; Genetic diversity; Population structure

Indexed keywords

BRASENIA SCHREBERI; CABOMBACEAE;

EID: 84855507395     PISSN: 12269239     EISSN: None     Source Type: Journal    
DOI: 10.1007/s12374-011-9193-4     Document Type: Article
Times cited : (14)

References (52)
  • 1
    • 0003078191 scopus 로고
    • Demography and vegetative reproduction
    • O. T. Solbrig (Ed.), Oxford: Blackwell Scientific Publications
    • Abrahamson WG (1980) Demography and vegetative reproduction. In: Solbrig OT (ed) Demography and evolution in plant populations. Blackwell Scientific Publications, Oxford, pp 89-106.
    • (1980) Demography and Evolution in Plant Populations , pp. 89-106
    • Abrahamson, W.G.1
  • 2
    • 0003892502 scopus 로고
    • Australia: Melbourne University Press
    • Aston HI (1977) Aquatic plants of Australia. Melbourne University Press, Australia, pp 46-48.
    • (1977) Aquatic Plants of Australia , pp. 46-48
    • Aston, H.I.1
  • 3
    • 0032900678 scopus 로고    scopus 로고
    • Median joining network for inferring intraspecific phylogenies
    • Bandelet HJ, Forster P, Rohi A (1999) Median joining network for inferring intraspecific phylogenies. Mol Biol Evol 16: 37-48.
    • (1999) Mol Biol Evol , vol.16 , pp. 37-48
    • Bandelet, H.J.1    Forster, P.2    Rohi, A.3
  • 4
    • 0141495095 scopus 로고    scopus 로고
    • A rapid DNA minipreparation method suitable for AFLP and other PCR applications
    • Chen D-H, Ronald PC (1999) A rapid DNA minipreparation method suitable for AFLP and other PCR applications. Plant Mol Biol Rep 17: 53-57.
    • (1999) Plant Mol Biol Rep , vol.17 , pp. 53-57
    • Chen, D.-H.1    Ronald, P.C.2
  • 5
    • 47649125533 scopus 로고    scopus 로고
    • Chloroplast DNA phylogeography of the Chinese endemic alpine quillwort Isoetes hypsophila Hand.-Mazz. (Isoetaceae)
    • Chen J-M, Liu F, Gituru WR, Wang Q-F (2008a) Chloroplast DNA phylogeography of the Chinese endemic alpine quillwort Isoetes hypsophila Hand.-Mazz. (Isoetaceae). Int J Plant Sci 169: 792-798.
    • (2008) Int J Plant Sci , vol.169 , pp. 792-798
    • Chen, J.-M.1    Liu, F.2    Gituru, W.R.3    Wang, Q.-F.4
  • 6
    • 36049013010 scopus 로고    scopus 로고
    • Genetic diversity of the threatened aquatic plant Ottelia alismoides in Yangtze River
    • Chen Y-Y, Li X-L, Yin L-Y, Li W (2008b) Genetic diversity of the threatened aquatic plant Ottelia alismoides in Yangtze River. Aquat Bot 88: 10-16.
    • (2008) Aquat Bot , vol.88 , pp. 10-16
    • Chen, Y.-Y.1    Li, X.-L.2    Yin, L.-Y.3    Li, W.4
  • 7
    • 0035206404 scopus 로고    scopus 로고
    • Phylogeography of Kandelia candel in East Asiatic mangroves based on nucleotide variation of chloroplast and mitochondrial DNAs
    • Chiang TY, Chiang YC, Chen YJ, Chou CH, Havanond S, Hong TN, Huang S (2001) Phylogeography of Kandelia candel in East Asiatic mangroves based on nucleotide variation of chloroplast and mitochondrial DNAs. Mol Ecol 10: 2697-2710.
    • (2001) Mol Ecol , vol.10 , pp. 2697-2710
    • Chiang, T.Y.1    Chiang, Y.C.2    Chen, Y.J.3    Chou, C.H.4    Havanond, S.5    Hong, T.N.6    Huang, S.7
  • 8
    • 84855482085 scopus 로고    scopus 로고
    • Academy Publishing Press, Seoul: In The Genera of Vascular Plants of Korea
    • Choi H-K (2007) Cabombaceae Rich ex A Rich. In The Genera of Vascular Plants of Korea, Academy Publishing Press, Seoul, p 163.
    • (2007) Cabombaceae Rich Ex A Rich , pp. 163
    • Choi, H.-K.1
  • 9
    • 0041174606 scopus 로고
    • The winter buds of Brasenia
    • Chrysler MA (1938) The winter buds of Brasenia. Bull Torrey Bot Club 65: 277-283.
    • (1938) Bull Torrey Bot Club , vol.65 , pp. 277-283
    • Chrysler, M.A.1
  • 11
    • 0027285731 scopus 로고
    • Empirical tests of some predictions from coalescent theory with applications to intraspecific phylogeny reconstruction
    • Crandall KA, Templeton AR (1993) Empirical tests of some predictions from coalescent theory with applications to intraspecific phylogeny reconstruction. Genetics 134: 959-969.
    • (1993) Genetics , vol.134 , pp. 959-969
    • Crandall, K.A.1    Templeton, A.R.2
  • 12
    • 0038200552 scopus 로고
    • An examination of the phytotoxicity of the water shield, Brasenia schreberi
    • Elakovich SD, Wooten JW (1987) An examination of the phytotoxicity of the water shield, Brasenia schreberi. J Chem Ecol 13: 1935-1940.
    • (1987) J Chem Ecol , vol.13 , pp. 1935-1940
    • Elakovich, S.D.1    Wooten, J.W.2
  • 13
    • 32044468310 scopus 로고    scopus 로고
    • Arlequin: An integrated software for population genetics data analysis. Ver. 3.0
    • Excoffier L, Laval G, Schneider S (2005) Arlequin: an integrated software for population genetics data analysis. Ver. 3. 0. Evol Bioinforma Online 1: 47-50.
    • (2005) Evol Bioinforma Online , vol.1 , pp. 47-50
    • Excoffier, L.1    Laval, G.2    Schneider, S.3
  • 15
    • 0033844759 scopus 로고    scopus 로고
    • RAPD variation among and within small and large populations of the rare clonal plant Ranunculus reptans (Ranunculaceae)
    • Fischer M, Husi R, Prati D, Peintinger M, Kleunen M, Schmid B (2000) RAPD variation among and within small and large populations of the rare clonal plant Ranunculus reptans (Ranunculaceae). Am J Bot 87: 1128-1137.
    • (2000) Am J Bot , vol.87 , pp. 1128-1137
    • Fischer, M.1    Husi, R.2    Prati, D.3    Peintinger, M.4    Kleunen, M.5    Schmid, B.6
  • 16
    • 0030436959 scopus 로고    scopus 로고
    • Relationship of genetic variation to population size in wildlife
    • Frankham R (1996) Relationship of genetic variation to population size in wildlife. Conserv Biol 10: 1500-1508.
    • (1996) Conserv Biol , vol.10 , pp. 1500-1508
    • Frankham, R.1
  • 17
    • 0030620206 scopus 로고    scopus 로고
    • Do island populations have less genetic variation than mainland populations?
    • Frankham R (1997) Do island populations have less genetic variation than mainland populations? Heredity 78: 311-327.
    • (1997) Heredity , vol.78 , pp. 311-327
    • Frankham, R.1
  • 18
    • 0027453041 scopus 로고
    • Statistical tests of neutrality of mutations
    • Fu YX, Li WH (1993) Statistical tests of neutrality of mutations. Genetics 133: 693-709.
    • (1993) Genetics , vol.133 , pp. 693-709
    • Fu, Y.X.1    Li, W.H.2
  • 19
    • 77649317480 scopus 로고    scopus 로고
    • 2nd edn., Sunderland, Massachusetts: Sinauer
    • Futuyma DJ (2009) Evolution, 2nd edn. Sinauer, Sunderland, Massachusetts, pp 255-277.
    • (2009) Evolution , pp. 255-277
    • Futuyma, D.J.1
  • 20
    • 3543082230 scopus 로고    scopus 로고
    • Phylogeographic study based on intraspecific sequence variation of chloroplast DNA for the conservation of genetic diversity in the Japanese endangered species Primula sieboldii
    • Honjoa M, Uenob S, Tsumurab Y, Washitanic I, Ohsawaa R (2004) Phylogeographic study based on intraspecific sequence variation of chloroplast DNA for the conservation of genetic diversity in the Japanese endangered species Primula sieboldii. Biol Conserv 120: 211-220.
    • (2004) Biol Conserv , vol.120 , pp. 211-220
    • Honjoa, M.1    Uenob, S.2    Tsumurab, Y.3    Washitanic, I.4    Ohsawaa, R.5
  • 21
    • 17444397763 scopus 로고    scopus 로고
    • Phylogeography and conservation genetics of Hygrophila pogonocalyx (Acanthaceae) based on atpB-rbcL noncoding spacer cpDNA
    • Huang J-C, Wang W-K, Ping C-I, Chiang T-Y (2005) Phylogeography and conservation genetics of Hygrophila pogonocalyx (Acanthaceae) based on atpB-rbcL noncoding spacer cpDNA. J Plant Res 118: 1-11.
    • (2005) J Plant Res , vol.118 , pp. 1-11
    • Huang, J.-C.1    Wang, W.-K.2    Ping, C.-I.3    Chiang, T.-Y.4
  • 22
    • 56349162735 scopus 로고    scopus 로고
    • Varieties of aquatic vegetables and their utilization in China
    • Jiang JZ, Cao BS (2008) Varieties of aquatic vegetables and their utilization in China. Acta Hortic 769: 77-82.
    • (2008) Acta Hortic , vol.769 , pp. 77-82
    • Jiang, J.Z.1    Cao, B.S.2
  • 23
    • 48649110243 scopus 로고    scopus 로고
    • Characterization of water and sediment environment in water shield (Brasenia schreberi) habitats
    • Kim Y-D (1996) Characterization of water and sediment environment in water shield (Brasenia schreberi) habitats. Kor J Ecol 19: 209-216.
    • (1996) Kor J Ecol , vol.19 , pp. 209-216
    • Kim, Y.-D.1
  • 24
    • 48649093274 scopus 로고    scopus 로고
    • Conservation genetics of endangered Brasenia schreberi based on RAPD and AFLP markers
    • Kim C, Na HR, Choi H-K (2008) Conservation genetics of endangered Brasenia schreberi based on RAPD and AFLP markers. J Plant Biol 51: 260-268.
    • (2008) J Plant Biol , vol.51 , pp. 260-268
    • Kim, C.1    Na, H.R.2    Choi, H.-K.3
  • 25
    • 33947193422 scopus 로고    scopus 로고
    • The genetic structure of populations of the vulnerable aquatic macrophyte Ranunculus nipponicus (Ranunculaceae)
    • Koga K, Kadono Y, Setoguchi H (2007) The genetic structure of populations of the vulnerable aquatic macrophyte Ranunculus nipponicus (Ranunculaceae). J Plant Res 120: 167-174.
    • (2007) J Plant Res , vol.120 , pp. 167-174
    • Koga, K.1    Kadono, Y.2    Setoguchi, H.3
  • 26
    • 43049168902 scopus 로고    scopus 로고
    • Phylogeography of Japanese water crowfoot based on chloroplast DNA haplotypes
    • Koga K, Kadono Y, Setoguchi H (2009) Phylogeography of Japanese water crowfoot based on chloroplast DNA haplotypes. Aquat Bot 89: 1-8.
    • (2009) Aquat Bot , vol.89 , pp. 1-8
    • Koga, K.1    Kadono, Y.2    Setoguchi, H.3
  • 27
    • 21344482889 scopus 로고
    • Rhizome longevity in two floating-leaved aquatic macrophytes, Nymphaea tetragona and Brasenia schreberi
    • Kunii H (1993) Rhizome longevity in two floating-leaved aquatic macrophytes, Nymphaea tetragona and Brasenia schreberi. J Aquat Plant Manag 31: 94-98.
    • (1993) J Aquat Plant Manag , vol.31 , pp. 94-98
    • Kunii, H.1
  • 28
    • 79959434056 scopus 로고    scopus 로고
    • Population genetic structure and gene flow of Forsythia suspense (Oleaceae) in Henan revealed by nuclear and chloroplast DNA
    • Li Y, Li Y, Yang P, He S (2011) Population genetic structure and gene flow of Forsythia suspense (Oleaceae) in Henan revealed by nuclear and chloroplast DNA. Afr J Biotechnol 10: 5109-5117.
    • (2011) Afr J Biotechnol , vol.10 , pp. 5109-5117
    • Li, Y.1    Li, Y.2    Yang, P.3    He, S.4
  • 29
    • 13944269848 scopus 로고    scopus 로고
    • The seed bank in a subtropical freshwater marsh: implications for wetland restoration
    • Liu G-H, Zhou J, Li W, Cheng Y (2005) The seed bank in a subtropical freshwater marsh: implications for wetland restoration. Aquat Bot 81: 1-11.
    • (2005) Aquat Bot , vol.81 , pp. 1-11
    • Liu, G.-H.1    Zhou, J.2    Li, W.3    Cheng, Y.4
  • 30
    • 23044532223 scopus 로고    scopus 로고
    • Genetic variation and population differentiation of Michelia formosana (Magnoliaceae) based on cpDNA variation and RAPD fingerprints: relevance to post-Pleistocene recolonization
    • Lu S-Y, Hong K-H, Liu S-L, Cheng Y-P, Wu W-L, Chiang T-Y (2002) Genetic variation and population differentiation of Michelia formosana (Magnoliaceae) based on cpDNA variation and RAPD fingerprints: relevance to post-Pleistocene recolonization. J Plant Res 115: 203-216.
    • (2002) J Plant Res , vol.115 , pp. 203-216
    • Lu, S.-Y.1    Hong, K.-H.2    Liu, S.-L.3    Cheng, Y.-P.4    Wu, W.-L.5    Chiang, T.-Y.6
  • 31
    • 0031961346 scopus 로고    scopus 로고
    • Genetic diversity in island and mainland populations of Aster spathulifolius (Asteraceae)
    • Maki M, Morita H (1998) Genetic diversity in island and mainland populations of Aster spathulifolius (Asteraceae). Int J Plant Sci 159: 148-152.
    • (1998) Int J Plant Sci , vol.159 , pp. 148-152
    • Maki, M.1    Morita, H.2
  • 32
    • 0006919926 scopus 로고
    • Analysis of gene diversity in subdivided populations
    • Nei M (1973) Analysis of gene diversity in subdivided populations. Proc Nat Acad Sci U S A 70: 3321-3323.
    • (1973) Proc Nat Acad Sci U S A , vol.70 , pp. 3321-3323
    • Nei, M.1
  • 34
    • 0020825204 scopus 로고
    • Maximum likelihood estimation of the number of nucleotide substitutions from restriction site data
    • Nei M, Tajima F (1983) Maximum likelihood estimation of the number of nucleotide substitutions from restriction site data. Genetics 105: 207-217.
    • (1983) Genetics , vol.105 , pp. 207-217
    • Nei, M.1    Tajima, F.2
  • 35
    • 48649096169 scopus 로고    scopus 로고
    • High frequency plant regeneration from zygotic-embryo-derived embryogenic cell suspension cultures of watershield (Brasenia schreberi)
    • Oh MJ, Na HR, Choi H-K, Liu JR, Kim SW (2008) High frequency plant regeneration from zygotic-embryo-derived embryogenic cell suspension cultures of watershield (Brasenia schreberi). Plant Biotechnol Rep 2: 87-92.
    • (2008) Plant Biotechnol Rep , vol.2 , pp. 87-92
    • Oh, M.J.1    Na, H.R.2    Choi, H.-K.3    Liu, J.R.4    Kim, S.W.5
  • 36
    • 0000105697 scopus 로고
    • Morphological studies of the Nymphaeaceae sensu lato XVI. The floral biology of Brasenia schreberi
    • Osborn JM, Schneider EL (1988) Morphological studies of the Nymphaeaceae sensu lato XVI. The floral biology of Brasenia schreberi. Ann Mo Bot Gard 75: 778-794.
    • (1988) Ann Mo Bot Gard , vol.75 , pp. 778-794
    • Osborn, J.M.1    Schneider, E.L.2
  • 37
    • 33845599486 scopus 로고    scopus 로고
    • Identification of management units using population genetic data
    • Palsboll PJ, Berube M, Allendorf FW (2007) Identification of management units using population genetic data. Trends Ecol Evol 22: 11-16.
    • (2007) Trends Ecol Evol , vol.22 , pp. 11-16
    • Palsboll, P.J.1    Berube, M.2    Allendorf, F.W.3
  • 39
    • 0347513220 scopus 로고    scopus 로고
    • DnaSP, DNA polymorphism analyses by the coalescent and other methods. Ver. 4.20
    • Rozas J, Sanchez-Delbarrio JC, Messeguer X, Rozas R (2003) DnaSP, DNA polymorphism analyses by the coalescent and other methods. Ver. 4. 20. Bioinformatics 19: 2496-2497.
    • (2003) Bioinformatics , vol.19 , pp. 2496-2497
    • Rozas, J.1    Sanchez-Delbarrio, J.C.2    Messeguer, X.3    Rozas, R.4
  • 40
    • 33845599911 scopus 로고    scopus 로고
    • Genetic monitoring as a promising tool for conservation and management
    • Schwartz MK, Luikart G, Waples RS (2007) Genetic monitoring as a promising tool for conservation and management. Trends Ecol Evol 22: 25-33.
    • (2007) Trends Ecol Evol , vol.22 , pp. 25-33
    • Schwartz, M.K.1    Luikart, G.2    Waples, R.S.3
  • 41
    • 0032996733 scopus 로고    scopus 로고
    • Molecular systematic and the conservation of rare species
    • Soltis PS, Gitzendanner MA (1999) Molecular systematic and the conservation of rare species. Conserv Biol 13: 471-483.
    • (1999) Conserv Biol , vol.13 , pp. 471-483
    • Soltis, P.S.1    Gitzendanner, M.A.2
  • 42
    • 11144292140 scopus 로고    scopus 로고
    • Genetic differentiation of relictural populations of Alsophila spinulosa in southern China inferred from cpDNA trnL-F noncoding sequences
    • Su Y-J, Wang T, Zheng B, Jiang Y, Chen G-P, Ouyang P-Y, Sun Y-F (2005) Genetic differentiation of relictural populations of Alsophila spinulosa in southern China inferred from cpDNA trnL-F noncoding sequences. Mol Phylogenet Evol 34: 323-333.
    • (2005) Mol Phylogenet Evol , vol.34 , pp. 323-333
    • Su, Y.-J.1    Wang, T.2    Zheng, B.3    Jiang, Y.4    Chen, G.-P.5    Ouyang, P.-Y.6    Sun, Y.-F.7
  • 43
    • 0004248459 scopus 로고    scopus 로고
    • Ver. 4. 0b10 Sinauer Associates Inc., Sunderland MA
    • *and other methods). Ver. 4. 0b10. Sinauer Associates Inc., Sunderland MA.
    • (2002) *and other methods)
    • Swofford, D.L.1
  • 44
    • 0024313579 scopus 로고
    • Statistical method for testing the neutral mutation hypothesis by DNA polymorphism
    • Tajima F (1989) Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics 123: 585-595.
    • (1989) Genetics , vol.123 , pp. 585-595
    • Tajima, F.1
  • 45
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: molecular evolutionary genetic analysis (MEGA) software. Ver.4.0
    • Tamura K, Dudley J, Nei M, Kumar S (2007) MEGA4: molecular evolutionary genetic analysis (MEGA) software. Ver. 4. 0. Mol Biol Evol 24: 1596-1599.
    • (2007) Mol Biol Evol , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 46
    • 49049098659 scopus 로고    scopus 로고
    • Chloroplast DNA variation and phylogeographic patterns in the Chinese endemic marsh herb Sagittaria potamogetifolia
    • Tan B, Liu K, Yue X-L, Liu F, Chen J-M, Wang Q-F (2008) Chloroplast DNA variation and phylogeographic patterns in the Chinese endemic marsh herb Sagittaria potamogetifolia. Aquat Bot 89: 372-378.
    • (2008) Aquat Bot , vol.89 , pp. 372-378
    • Tan, B.1    Liu, K.2    Yue, X.-L.3    Liu, F.4    Chen, J.-M.5    Wang, Q.-F.6
  • 47
    • 0031574072 scopus 로고    scopus 로고
    • The Clustal X windows interface: flexible strategies for multiple sequences alignment aided by quality analysis tools
    • Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997) The Clustal X windows interface: flexible strategies for multiple sequences alignment aided by quality analysis tools. Nucleic Acids Res 24: 4876-4882.
    • (1997) Nucleic Acids Res , vol.24 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 48
    • 84855492416 scopus 로고    scopus 로고
    • Genetic variation in the endangered Astragalus jaegerianus (Fabaceae, Papilionoideae): a geographically restricted species
    • Walker GF, Metcalf AE (2008) Genetic variation in the endangered Astragalus jaegerianus (Fabaceae, Papilionoideae): a geographically restricted species. Bull Southern California Acad Sci 177: 158-177.
    • (2008) Bull Southern California Acad Sci , vol.177 , pp. 158-177
    • Walker, G.F.1    Metcalf, A.E.2
  • 49
    • 13944269114 scopus 로고
    • A survey on the habitats of rare and endangered aquatic plants in Hunan Province
    • Wang X, Chen J (1994) A survey on the habitats of rare and endangered aquatic plants in Hunan Province. Biodiv Sci 2: 193-198.
    • (1994) Biodiv Sci , vol.2 , pp. 193-198
    • Wang, X.1    Chen, J.2
  • 50
    • 0000432452 scopus 로고
    • Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics
    • M. A. Innis, D. H. Gelfand, J. J. Sninsky, and T. J. White (Eds.), San Diego: Academic
    • White TJ, Birns T, Lee S, Taylor J (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ (eds) PCR protocols: a guide to methods and applications. Academic, San Diego, pp 315-322.
    • (1990) PCR Protocols: A Guide to Methods and Applications , pp. 315-322
    • White, T.J.1    Birns, T.2    Lee, S.3    Taylor, J.4
  • 51
    • 33748856941 scopus 로고    scopus 로고
    • Genetic diversity and geographic pattern of wild lotus (Nelumbo nucifera) in Heilongjiang Province
    • Xue J, Zhuo L, Zhou S (2006) Genetic diversity and geographic pattern of wild lotus (Nelumbo nucifera) in Heilongjiang Province. Chin Sci Bull 51: 421-432.
    • (2006) Chin Sci Bull , vol.51 , pp. 421-432
    • Xue, J.1    Zhuo, L.2    Zhou, S.3
  • 52
    • 0001354070 scopus 로고
    • Evolution of higher-plant chloroplast DNA-encoded genes: implications for structure-function and phylogenetic studies
    • Zurawski G, Clegg MT (1987) Evolution of higher-plant chloroplast DNA-encoded genes: implications for structure-function and phylogenetic studies. Annu Rev Plant Physiol 38: 391-418.
    • (1987) Annu Rev Plant Physiol , vol.38 , pp. 391-418
    • Zurawski, G.1    Clegg, M.T.2


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