메뉴 건너뛰기




Volumn 6, Issue 9, 2011, Pages

Desert farming benefits from microbial potential in arid soils and promotes diversity and plant health

Author keywords

[No Author keywords available]

Indexed keywords

RNA 16S; BACTERIAL RNA;

EID: 84855175368     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0024452     Document Type: Article
Times cited : (195)

References (47)
  • 1
    • 79952143493 scopus 로고    scopus 로고
    • Environmental technology. Greenhouse-power plant hybrid set to make Jordan's desert bloom
    • Clery D, (2011) Environmental technology. Greenhouse-power plant hybrid set to make Jordan's desert bloom. Science 331: 136.
    • (2011) Science , vol.331 , pp. 136
    • Clery, D.1
  • 2
    • 78650628897 scopus 로고    scopus 로고
    • Anthropization on the Cerrado biome in the Brazilian Uruçuí-Una Ecological Station estimated from orbital images
    • Pereira AC, Gama VF, (2010) Anthropization on the Cerrado biome in the Brazilian Uruçuí-Una Ecological Station estimated from orbital images. Braz J Biol 70: 969-976.
    • (2010) Braz J Biol , vol.70 , pp. 969-976
    • Pereira, A.C.1    Gama, V.F.2
  • 3
    • 85054752926 scopus 로고    scopus 로고
    • Egypt plan to green Sahara desert stirs controversy
    • Available:. Accessed 2011 Aug 16
    • Reuters, (2007) Egypt plan to green Sahara desert stirs controversy. Reuters website Available: http://www.reuters.com/article/2007/10/09/us-desert-egypt-idUSL2651867020071009. Accessed 2011 Aug 16.
    • (2007) Reuters Website
    • Reuters1
  • 4
    • 44249098016 scopus 로고    scopus 로고
    • A tale of four stories: soil ecology, theory, evolution and the publication system
    • Barot S, Blouin M, Fontaine S, Jouquet P, Lata JC, et al. (2007) A tale of four stories: soil ecology, theory, evolution and the publication system. PLoS One 28: e1248.
    • (2007) PLoS One , vol.28
    • Barot, S.1    Blouin, M.2    Fontaine, S.3    Jouquet, P.4    Lata, J.C.5
  • 5
    • 53449086190 scopus 로고    scopus 로고
    • Tag-encoded pyrosequencing analysis of bacterial diversity in a single soil type as affected by management and land use
    • Acosta-Martínez V, Dowd S, Sun Y, Allen V, (2008) Tag-encoded pyrosequencing analysis of bacterial diversity in a single soil type as affected by management and land use. Soil Biol Biochem 40: 2762-2770.
    • (2008) Soil Biol Biochem , vol.40 , pp. 2762-2770
    • Acosta-Martínez, V.1    Dowd, S.2    Sun, Y.3    Allen, V.4
  • 7
    • 80052044392 scopus 로고    scopus 로고
    • Stochastic and deterministic processes interact in the assembly of desert microbial communities on a global scale
    • Caruso T, Chan Y, Lacap DC, Lau MC, McKay CP, et al. (2011) Stochastic and deterministic processes interact in the assembly of desert microbial communities on a global scale. ISME J: In press.
    • (2011) ISME J: In Press
    • Caruso, T.1    Chan, Y.2    Lacap, D.C.3    Lau, M.C.4    McKay, C.P.5
  • 8
    • 31444447130 scopus 로고    scopus 로고
    • The diversity and biogeography of soil bacterial communities
    • Fierer N, Jackson RB, (2006) The diversity and biogeography of soil bacterial communities. Proc Natl Acad Sci USA 103: 626-631.
    • (2006) Proc Natl Acad Sci USA , vol.103 , pp. 626-631
    • Fierer, N.1    Jackson, R.B.2
  • 10
    • 77950057025 scopus 로고    scopus 로고
    • Biogeography of soil archaea and bacteria along a steep precipitation gradient
    • Angel R, Soares MI, Ungar ED, Gillor O, (2010) Biogeography of soil archaea and bacteria along a steep precipitation gradient. ISME J 4: 553-563.
    • (2010) ISME J , vol.4 , pp. 553-563
    • Angel, R.1    Soares, M.I.2    Ungar, E.D.3    Gillor, O.4
  • 11
    • 78649518448 scopus 로고    scopus 로고
    • Comparative analysis of the microbial communities inhabiting halite evaporites of the Atacama Desert
    • de Los Ríos A, Valea S, Ascaso C, Davila A, Kastovsky J, et al. (2010) Comparative analysis of the microbial communities inhabiting halite evaporites of the Atacama Desert. Int Microbiol 13: 79-89.
    • (2010) Int Microbiol , vol.13 , pp. 79-89
    • de Los Ríos, A.1    Valea, S.2    Ascaso, C.3    Davila, A.4    Kastovsky, J.5
  • 12
    • 4143092723 scopus 로고    scopus 로고
    • Rhizosheath of Sinai desert plants is a potential repository for associative diazotrophs
    • Othman AA, Amer WM, Fayez M, Hegazi NA, (2004) Rhizosheath of Sinai desert plants is a potential repository for associative diazotrophs. Microbiol Res 159: 285-293.
    • (2004) Microbiol Res , vol.159 , pp. 285-293
    • Othman, A.A.1    Amer, W.M.2    Fayez, M.3    Hegazi, N.A.4
  • 13
    • 78650678238 scopus 로고    scopus 로고
    • Soil microbial diversity in the vicinity of a Negev Desert shrub - Reaumuria negevensis
    • Saul-Tcherkas V, Steinberger Y, (2011) Soil microbial diversity in the vicinity of a Negev Desert shrub - Reaumuria negevensis. Microb Ecol 61: 64-81.
    • (2011) Microb Ecol , vol.61 , pp. 64-81
    • Saul-Tcherkas, V.1    Steinberger, Y.2
  • 14
    • 0037205025 scopus 로고    scopus 로고
    • Soil fertility and biodiversity in organic farming
    • Mäder P, Fliessbach A, Dubois D, Gunst L, Fried P, et al. (2002) Soil fertility and biodiversity in organic farming. Science 296: 1694-1697.
    • (2002) Science , vol.296 , pp. 1694-1697
    • Mäder, P.1    Fliessbach, A.2    Dubois, D.3    Gunst, L.4    Fried, P.5
  • 15
    • 79957595286 scopus 로고    scopus 로고
    • Deciphering the rhizosphere microbiome for disease-suppressive bacteria
    • Mendes R, Kruijt M, de Bruijn I, Dekkers E, van der Voort M, et al. (2011) Deciphering the rhizosphere microbiome for disease-suppressive bacteria. Science 27: 1097-1100.
    • (2011) Science , vol.27 , pp. 1097-1100
    • Mendes, R.1    Kruijt, M.2    de Bruijn, I.3    Dekkers, E.4    van der Voort, M.5
  • 16
    • 58849107496 scopus 로고    scopus 로고
    • Beyond social and private enterprise: towards the integrated enterprise
    • Schieffer A, Lessem R, (2009) Beyond social and private enterprise: towards the integrated enterprise. Transit Stud Rev 15: 713-725.
    • (2009) Transit Stud Rev , vol.15 , pp. 713-725
    • Schieffer, A.1    Lessem, R.2
  • 17
    • 84893381893 scopus 로고    scopus 로고
    • Carbon sequestration potential of reclaimed desert soils in Egypt. Louis Bolk Instituut & Soil and More International
    • Available:. Accessed 2011 Mar 16
    • Luske B, van der Kamp J, (2009) Carbon sequestration potential of reclaimed desert soils in Egypt. Louis Bolk Instituut & Soil and More International. Soil and More International website Available: http://www.soilandmore.nl/userfiles/Carbon_Sequestration_Potential_Report_Final.pdf. Accessed 2011 Mar 16.
    • (2009) Soil and More International Website
    • Luske, B.1    van der Kamp, J.2
  • 18
    • 67651247607 scopus 로고    scopus 로고
    • Pyrosequencing-based assessment of soil pH as a predictor of soil bacterial community structure at the continental scale
    • Lauber CL, Hamady M, Knight R, Fierer N, (2009) Pyrosequencing-based assessment of soil pH as a predictor of soil bacterial community structure at the continental scale. Appl Environ Microbiol 75: 5111-5120.
    • (2009) Appl Environ Microbiol , vol.75 , pp. 5111-5120
    • Lauber, C.L.1    Hamady, M.2    Knight, R.3    Fierer, N.4
  • 19
    • 70449530747 scopus 로고    scopus 로고
    • Metagenomic study of the oral microbiota by Illumina high-throughput sequencing
    • Lazarevic V, Whiteson K, Huse S, Hernandez D, Farinelli L, et al. (2009) Metagenomic study of the oral microbiota by Illumina high-throughput sequencing. J Microbiol Methods 79: 266-271.
    • (2009) J Microbiol Methods , vol.79 , pp. 266-271
    • Lazarevic, V.1    Whiteson, K.2    Huse, S.3    Hernandez, D.4    Farinelli, L.5
  • 20
    • 77958542467 scopus 로고    scopus 로고
    • Horizon-specific bacterial community composition of German grassland soils, as revealed by pyrosequencing-based analysis of 16S rRNA genes
    • Will C, Thürmer A, Wollherr A, Nacke H, Herold N, et al. (2010) Horizon-specific bacterial community composition of German grassland soils, as revealed by pyrosequencing-based analysis of 16S rRNA genes. Appl Environ Micobiol 76: 6751-6759.
    • (2010) Appl Environ Micobiol , vol.76 , pp. 6751-6759
    • Will, C.1    Thürmer, A.2    Wollherr, A.3    Nacke, H.4    Herold, N.5
  • 21
    • 40549127742 scopus 로고    scopus 로고
    • Changes in bacterial and archaeal community structure and functional diversity along a geochemically variable soil profile
    • Hansel CM, Fendorf S, Jardine PM, Francis CA, (2008) Changes in bacterial and archaeal community structure and functional diversity along a geochemically variable soil profile. Appl Environ Microbiol 74: 1620-1633.
    • (2008) Appl Environ Microbiol , vol.74 , pp. 1620-1633
    • Hansel, C.M.1    Fendorf, S.2    Jardine, P.M.3    Francis, C.A.4
  • 22
    • 33644952722 scopus 로고    scopus 로고
    • Identifying the dominant soil bacterial taxa in libraries of 16S rRNA and 16S rRNA genes
    • Janssen PH, (2006) Identifying the dominant soil bacterial taxa in libraries of 16S rRNA and 16S rRNA genes. Appl Environ Microbiol 72: 1719-1728.
    • (2006) Appl Environ Microbiol , vol.72 , pp. 1719-1728
    • Janssen, P.H.1
  • 23
    • 0032969488 scopus 로고    scopus 로고
    • Biocontrol of plant diseases: a (Gram-) positive perspective
    • Emmert EAB, Handelsman J, (1999) Biocontrol of plant diseases: a (Gram-) positive perspective. FEMS Microbiol Lett 171: 1-9.
    • (1999) FEMS Microbiol Lett , vol.171 , pp. 1-9
    • Emmert, E.A.B.1    Handelsman, J.2
  • 24
    • 58449108616 scopus 로고    scopus 로고
    • A major clade of prokaryotes with ancient adaptations to life on land
    • Battistuzzi FU, Hedges SB, (2008) A major clade of prokaryotes with ancient adaptations to life on land. Mol Biol Evol 26: 335-343.
    • (2008) Mol Biol Evol , vol.26 , pp. 335-343
    • Battistuzzi, F.U.1    Hedges, S.B.2
  • 25
    • 77954222689 scopus 로고    scopus 로고
    • Organic agriculture promotes evenness and natural pest control
    • Crowder DW, Northfield TD, Strand MR, Snyder WE, (2010) Organic agriculture promotes evenness and natural pest control. Nature 466: 109-112.
    • (2010) Nature , vol.466 , pp. 109-112
    • Crowder, D.W.1    Northfield, T.D.2    Strand, M.R.3    Snyder, W.E.4
  • 26
    • 79953177883 scopus 로고    scopus 로고
    • Functional and structural microbial diversity in organic and conventional viticulture: organic farming benefits natural biocontrol agents
    • Schmid F, Moser G, Müller H, Berg G, (2011) Functional and structural microbial diversity in organic and conventional viticulture: organic farming benefits natural biocontrol agents. Appl Environ Micobiol 77: 2188-2191.
    • (2011) Appl Environ Micobiol , vol.77 , pp. 2188-2191
    • Schmid, F.1    Moser, G.2    Müller, H.3    Berg, G.4
  • 27
    • 77955551494 scopus 로고    scopus 로고
    • Biotechnological doxorubicin production: pathway and regulation engineering of strains for enhanced production
    • Niraula NP, Kim SH, Sohng JK, Kim ES, (2010) Biotechnological doxorubicin production: pathway and regulation engineering of strains for enhanced production. Appl Microbiol Biotechnol 87: 1187-1194.
    • (2010) Appl Microbiol Biotechnol , vol.87 , pp. 1187-1194
    • Niraula, N.P.1    Kim, S.H.2    Sohng, J.K.3    Kim, E.S.4
  • 28
    • 27444437013 scopus 로고    scopus 로고
    • The rhizosphere as a reservoir for opportunistic human pathogenic bacteria
    • Berg G, Eberl L, Hartmann A, (2005) The rhizosphere as a reservoir for opportunistic human pathogenic bacteria. Environ Microbiol 7: 1673-1685.
    • (2005) Environ Microbiol , vol.7 , pp. 1673-1685
    • Berg, G.1    Eberl, L.2    Hartmann, A.3
  • 29
    • 79955646732 scopus 로고    scopus 로고
    • Assessment of the spatial distribution of soil microbial communities in patchy arid and semi-arid landscapes of the Negev Desert using combined PLFA and DGGE analyses
    • Ben-David EA, Zaady E, Sher Y, Nejidat A, (2011) Assessment of the spatial distribution of soil microbial communities in patchy arid and semi-arid landscapes of the Negev Desert using combined PLFA and DGGE analyses. FEMS Microbiol Ecol 76: 492-503.
    • (2011) FEMS Microbiol Ecol , vol.76 , pp. 492-503
    • Ben-David, E.A.1    Zaady, E.2    Sher, Y.3    Nejidat, A.4
  • 30
    • 0035487320 scopus 로고    scopus 로고
    • Bulk and rhizosphere soil bacterial communities studied by denaturing gradient gel electrophoresis: plant-dependent enrichment and seasonal shifts revealed
    • Smalla K, Wieland G, Buchner A, Zock A, Parzy J, et al. (2001) Bulk and rhizosphere soil bacterial communities studied by denaturing gradient gel electrophoresis: plant-dependent enrichment and seasonal shifts revealed. Appl Environ Microbiol 67: 4742-4751.
    • (2001) Appl Environ Microbiol , vol.67 , pp. 4742-4751
    • Smalla, K.1    Wieland, G.2    Buchner, A.3    Zock, A.4    Parzy, J.5
  • 31
    • 61649118780 scopus 로고    scopus 로고
    • Plant species and soil type cooperatively shape the structure and function of microbial communities in the rhizosphere
    • Berg G, Smalla K, (2009) Plant species and soil type cooperatively shape the structure and function of microbial communities in the rhizosphere. FEMS Microbiol Ecol 68: 1-13.
    • (2009) FEMS Microbiol Ecol , vol.68 , pp. 1-13
    • Berg, G.1    Smalla, K.2
  • 32
    • 33746007545 scopus 로고    scopus 로고
    • A review of the bioactivity and potential health benefits of chamomile tea (Matricaria recutita L.)
    • McKay DL, Blumberg JB, (2006) A review of the bioactivity and potential health benefits of chamomile tea (Matricaria recutita L.). Phytother Res 20: 519-530.
    • (2006) Phytother Res , vol.20 , pp. 519-530
    • McKay, D.L.1    Blumberg, J.B.2
  • 33
    • 33749395420 scopus 로고    scopus 로고
    • Perception and modification of plant flavonoid signals by rhizosphere microorganisms
    • Shaw LJ, Morris P, Hooker JE, (2006) Perception and modification of plant flavonoid signals by rhizosphere microorganisms. Environ Microbiol 8: 1867-1880.
    • (2006) Environ Microbiol , vol.8 , pp. 1867-1880
    • Shaw, L.J.1    Morris, P.2    Hooker, J.E.3
  • 34
    • 0031764376 scopus 로고    scopus 로고
    • A new approach to utilize PCR-single-strand-conformation polymorphism for 16S rRNA gene-based microbial community analysis
    • Schwieger F, Tebbe CC, (1998) A new approach to utilize PCR-single-strand-conformation polymorphism for 16S rRNA gene-based microbial community analysis. Appl Environ Microbiol 64: 4870-4876.
    • (1998) Appl Environ Microbiol , vol.64 , pp. 4870-4876
    • Schwieger, F.1    Tebbe, C.C.2
  • 35
    • 37648999456 scopus 로고    scopus 로고
    • Sugar beet-associated bacterial and fungal communities show a high indigenous antagonistic potential against plant pathogens
    • Zachow C, Tilcher R, Berg G, (2008) Sugar beet-associated bacterial and fungal communities show a high indigenous antagonistic potential against plant pathogens. Microb Ecol 55: 119-129.
    • (2008) Microb Ecol , vol.55 , pp. 119-129
    • Zachow, C.1    Tilcher, R.2    Berg, G.3
  • 36
    • 14644399291 scopus 로고    scopus 로고
    • Effects of transgenic potatoes with an altered starch composition on the diversity of soil and rhizosphere bacteria and fungi
    • Milling A, Smalla K, Maidl FX, Schloter M, Munch JC, (2004) Effects of transgenic potatoes with an altered starch composition on the diversity of soil and rhizosphere bacteria and fungi. Plant Soil 266: 23-39.
    • (2004) Plant Soil , vol.266 , pp. 23-39
    • Milling, A.1    Smalla, K.2    Maidl, F.X.3    Schloter, M.4    Munch, J.C.5
  • 37
    • 0025835296 scopus 로고
    • Fast and sensitive silver staining of DNA in polyacrylamid gels
    • Bassam BJ, Caetano-Anolles G, Gresshoff PM, (1991) Fast and sensitive silver staining of DNA in polyacrylamid gels. Anal Biochem 196: 80-83.
    • (1991) Anal Biochem , vol.196 , pp. 80-83
    • Bassam, B.J.1    Caetano-Anolles, G.2    Gresshoff, P.M.3
  • 38
    • 1842457702 scopus 로고    scopus 로고
    • Significance test for comparing complex microbial community fingerprints using pairwise similarity measures
    • Kropf S, Heuer H, Grüning M, Smalla K, (2004) Significance test for comparing complex microbial community fingerprints using pairwise similarity measures. J Microbiol Methods 57: 187-195.
    • (2004) J Microbiol Methods , vol.57 , pp. 187-195
    • Kropf, S.1    Heuer, H.2    Grüning, M.3    Smalla, K.4
  • 40
    • 0001857117 scopus 로고
    • 16S/23S rRNA sequencing
    • In: Stackebrandt E, Goodfellow M, editors, Chichester, John Wiley & Sons
    • Lane DJ, (1991) 16S/23S rRNA sequencing. In: Stackebrandt E, Goodfellow M, editors. Nucleic acid techniques in bacterial systematics Chichester John Wiley & Sons pp. 115-175.
    • (1991) Nucleic Acid Techniques in Bacterial Systematics , pp. 115-175
    • Lane, D.J.1
  • 43
    • 58149200948 scopus 로고    scopus 로고
    • The ribosomal database project: improved alignments and new tools for rRNA analysis
    • Cole JR, Wang Q, Cardenas E, Fish J, Chai B, et al. (2009) The ribosomal database project: improved alignments and new tools for rRNA analysis. Nucleic Acids Res 37: D141-D145.
    • (2009) Nucleic Acids Res , vol.37
    • Cole, J.R.1    Wang, Q.2    Cardenas, E.3    Fish, J.4    Chai, B.5
  • 44
    • 0031178951 scopus 로고    scopus 로고
    • The mathematical theory of communication. 1963
    • Shannon CE, (1997) The mathematical theory of communication. 1963. MD Comput 14: 306-317.
    • (1997) MD Comput , vol.14 , pp. 306-317
    • Shannon, C.E.1
  • 45
    • 0036712327 scopus 로고    scopus 로고
    • Estimating the number of species in a stochastic abundance model
    • Chao A, Bunge J, (2002) Estimating the number of species in a stochastic abundance model. Biometrics 58: 531-539.
    • (2002) Biometrics , vol.58 , pp. 531-539
    • Chao, A.1    Bunge, J.2
  • 46
    • 0036306048 scopus 로고    scopus 로고
    • Plant-dependent genotypic and phenotypic diversity of antagonistic rhizobacteria isolated from different Verticillium host plants
    • Berg G, Roskot N, Steidle A, Eberl L, Zock A, et al. (2002) Plant-dependent genotypic and phenotypic diversity of antagonistic rhizobacteria isolated from different Verticillium host plants. Appl Environ Microbiol 68: 3328-3338.
    • (2002) Appl Environ Microbiol , vol.68 , pp. 3328-3338
    • Berg, G.1    Roskot, N.2    Steidle, A.3    Eberl, L.4    Zock, A.5
  • 47
    • 0002924916 scopus 로고    scopus 로고
    • Characterization and classification of microbes by rep-PCR genomic fingerprinting and computer-assisted pattern analysis
    • In: Caetano-Anollés G, Gresshoff PM, editors, New York, John Wiley & Sons
    • Rademaker JLW, de Bruijn FJ, (1997) Characterization and classification of microbes by rep-PCR genomic fingerprinting and computer-assisted pattern analysis. In: Caetano-Anollés G, Gresshoff PM, editors. DNA markers: protocols, applications and overviews New York John Wiley & Sons pp. 151-171.
    • (1997) DNA Markers: Protocols, Applications and Overviews , pp. 151-171
    • Rademaker, J.L.W.1    de Bruijn, F.J.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.