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Volumn 57, Issue 2, 2004, Pages 187-195

Significance test for comparing complex microbial community fingerprints using pairwise similarity measures

Author keywords

Block design; Electrophoretic fingerprints; Pairwise distance measures; Permutation test

Indexed keywords

ARTICLE; BACTERIAL FLORA; BIOMETRY; COMPUTER PROGRAM; DENATURING GRADIENT GEL ELECTROPHORESIS; ELECTROPHORESIS; METHODOLOGY; NONHUMAN; NUCLEIC ACID SEQUENCE BASED AMPLIFICATION; POTATO; PRIORITY JOURNAL; RAPESEED; RNA FINGERPRINTING; STRAWBERRY;

EID: 1842457702     PISSN: 01677012     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.mimet.2004.01.002     Document Type: Article
Times cited : (144)

References (13)
  • 1
    • 0033811158 scopus 로고    scopus 로고
    • Analysis of similarity of electrophoretic patterns in mRNA differential display
    • Aittokallio T., Ojala P., Nevalainen T.J., Nevalainen O. Analysis of similarity of electrophoretic patterns in mRNA differential display. Electrophoresis. 21:2000;2947-2956.
    • (2000) Electrophoresis , vol.21 , pp. 2947-2956
    • Aittokallio, T.1    Ojala, P.2    Nevalainen, T.J.3    Nevalainen, O.4
  • 2
    • 0036202170 scopus 로고    scopus 로고
    • Evaluation of nested PCR-DGGE (Denaturing Gradient Gel Electrophoresis) with group-specific 16S rRNA primers for the analysis of bacterial communities from different wastewater treatment plants
    • Boon N., Windt W.D., Verstraete W., Top E.M. Evaluation of nested PCR-DGGE (Denaturing Gradient Gel Electrophoresis) with group-specific 16S rRNA primers for the analysis of bacterial communities from different wastewater treatment plants. FEMS Microbiology, Ecology. 39:2002;101-112.
    • (2002) FEMS Microbiology, Ecology , vol.39 , pp. 101-112
    • Boon, N.1    Windt, W.D.2    Verstraete, W.3    Top, E.M.4
  • 3
    • 0035163562 scopus 로고    scopus 로고
    • Analysis of bacterial communities in the rhizosphere of chrysanthemum via denaturing gradient gel electrophoresis of PCA-amplified 16S rRNA as well as DNA fragments coding for 16S rRNA
    • Duineveld B.M., Kowalchuk G.A., Keijzer A., van Elsas J.D., van Veen J.A. Analysis of bacterial communities in the rhizosphere of chrysanthemum via denaturing gradient gel electrophoresis of PCA-amplified 16S rRNA as well as DNA fragments coding for 16S rRNA. Applied and Environmental Microbiology. 67:2001;172-178.
    • (2001) Applied and Environmental Microbiology , vol.67 , pp. 172-178
    • Duineveld, B.M.1    Kowalchuk, G.A.2    Keijzer, A.3    Van Elsas, J.D.4    Van Veen, J.A.5
  • 4
    • 0030739128 scopus 로고    scopus 로고
    • Analysis of actinomycete communities by specific amplification of genes encoding 16S rRNA and gel-electrophoretic separation in denaturing gradients
    • Heuer H., Krsek M., Baker P., Smalla K., Wellington E.M. Analysis of actinomycete communities by specific amplification of genes encoding 16S rRNA and gel-electrophoretic separation in denaturing gradients. Applied and Environmental Microbiology. 63:1997;3233-3241.
    • (1997) Applied and Environmental Microbiology , vol.63 , pp. 3233-3241
    • Heuer, H.1    Krsek, M.2    Baker, P.3    Smalla, K.4    Wellington, E.M.5
  • 5
    • 85042251982 scopus 로고
    • Maximum likelihood paired-comparison ranking and quadratic assignment
    • Hubert L., Schultz J. Maximum likelihood paired-comparison ranking and quadratic assignment. Biometrika. 62:1975;655-659.
    • (1975) Biometrika , vol.62 , pp. 655-659
    • Hubert, L.1    Schultz, J.2
  • 6
    • 4243696808 scopus 로고    scopus 로고
    • Multivariate statistical applications in microbial ecology
    • Lyon S. Multivariate statistical applications in microbial ecology. Molecular Microbial Ecology Manual. 7.1.1:1999;1-34.
    • (1999) Molecular Microbial Ecology Manual , vol.711 , pp. 1-34
    • Lyon, S.1
  • 7
    • 0014054519 scopus 로고
    • The detection of disease clustering and a generalized regression approach
    • Mantel N. The detection of disease clustering and a generalized regression approach. Cancer Research. 27:1967;209-220.
    • (1967) Cancer Research , vol.27 , pp. 209-220
    • Mantel, N.1
  • 8
    • 0031959006 scopus 로고    scopus 로고
    • Application of denaturing gradient gel electrophoresis (DGGE) and temperature gradient gel electrophoresis (TGGE) in microbial ecology
    • Muyzer G., Smalla K. Application of denaturing gradient gel electrophoresis (DGGE) and temperature gradient gel electrophoresis (TGGE) in microbial ecology. Antonie van Leeuwenhoek. 73:1998;127-141.
    • (1998) Antonie Van Leeuwenhoek , vol.73 , pp. 127-141
    • Muyzer, G.1    Smalla, K.2
  • 10
    • 0003650048 scopus 로고
    • Applied Statistics. a Handbook of Techniques
    • New York: Springer-Verlag
    • Sachs L. Applied Statistics. A Handbook of Techniques. 2nd ed. 1984;Springer-Verlag, New York.
    • (1984) 2nd Ed.
    • Sachs, L.1
  • 11
    • 1842485143 scopus 로고    scopus 로고
    • Ein SAS-Macro zur Durchführung von Permutationstests in vollständigen und unvollständigen Versuchsanlagen
    • Schumacher E., Frisch M. Ein SAS-Macro zur Durchführung von Permutationstests in vollständigen und unvollständigen Versuchsanlagen. Zeitschrift für Agrarinformatik, Heft. 6:1997;125-130.
    • (1997) Zeitschrift für Agrarinformatik, Heft , vol.6 , pp. 125-130
    • Schumacher, E.1    Frisch, M.2
  • 12
    • 0035487320 scopus 로고    scopus 로고
    • Bulk and rhizosphere soil bacterial communities studied by denaturing gradient gel electrophoresis: Plant-dependent enrichment and seasonal shifts revealed
    • Smalla K., Wieland G., Buchner A., Zock A., Parzy J., Kaiser S., Roskot N., Heuer H., Berg G. Bulk and rhizosphere soil bacterial communities studied by denaturing gradient gel electrophoresis: plant-dependent enrichment and seasonal shifts revealed. Applied and Environmental Microbiology. 67:2001;4742-4751.
    • (2001) Applied and Environmental Microbiology , vol.67 , pp. 4742-4751
    • Smalla, K.1    Wieland, G.2    Buchner, A.3    Zock, A.4    Parzy, J.5    Kaiser, S.6    Roskot, N.7    Heuer, H.8    Berg, G.9


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.