Single-molecule protein arrays enabled by scanning probe block copolymer lithography

Proceedings of the National Academy of Sciences of the United States of America

Volumn 108, Issue 49, 2011, Pages 19521-19525

  Chai, Jinan ^a,b   Wong, Lu Shin ^a,b,d   Giam, Louise ^b,c   Mirkin, Chad A ^a,b,c  

^a NORTHWESTERN UNIVERSITY   (United States)

^b NORTHWESTERN UNIVERSITY   (United States)

^c Northwestern University   (United States)

^d UNIVERSITY OF MANCHESTER   (United Kingdom)

Author keywords

Dip pen nanolithography; Gold nanoparticles; Protein nanoarray; Scanning probe lithography; Single molecule array

Indexed keywords

COPOLYMER; GOLD NANOPARTICLE; QUANTUM DOT; SCAFFOLD PROTEIN; STREPTAVIDIN;

ANALYTIC METHOD; ANTIGEN ANTIBODY COMPLEX; ANTIGEN BINDING; ARTICLE; BINDING AFFINITY; ENZYME ACTIVITY; NONHUMAN; PARTICLE SIZE; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN BINDING; PROTEIN IMMOBILIZATION; PROTEIN MICROARRAY; SCANNING PROBE BLOCK COPOLYMER LITHOGRAPHY; SCANNING PROBE MICROSCOPY; TRANSMISSION ELECTRON MICROSCOPY;

CHLORIDES; GOLD; GOLD COMPOUNDS; IMMOBILIZED PROTEINS; METAL NANOPARTICLES; MICROSCOPY, ATOMIC FORCE; MICROSCOPY, ELECTRON, SCANNING; MICROSCOPY, ELECTRON, TRANSMISSION; MOLECULAR PROBES; NANOTECHNOLOGY; PARTICLE SIZE; POLYMERS; PROTEIN ARRAY ANALYSIS; PROTEINS; QUANTUM DOTS; REPRODUCIBILITY OF RESULTS; SPECTROMETRY, X-RAY EMISSION; SURFACE PROPERTIES;

EID: 83755183688     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.1116099108     Document Type: Article

References (38)

1. Lee KB, Kim EY, Mirkin CA, Wolinsky SM (2004) The use of nanoarrays for highly sensitive and selective detection of human immunodeficiency virus type 1 in plasma. Nano Lett 4:1869-1872.
2. Wingren C, Borrebaeck CAK (2007) Progress in miniaturization of protein arrays-a step closer to high-density nanoarrays. Drug Discov Today 12:813-819. (Pubitemid 47539968)
3. Chen H, Li J (2007) Nanotechnology: Moving from microarrays toward nanoarrays. Methods Mol Biol 381:411-436. (Pubitemid 350189903)
4. Théry M (2010) Micropatterning as a tool to decipher cell morphogenesis and functions. J Cell Sci 123:4201-4213.
5. Vogel V, Sheetz M (2006) Local force and geometry sensing regulate cell functions. Nat Rev Mol Cell Biol 7:265-275.
6. Lutolf MP, Gilbert PM, Blau HM (2009) Designing materials to direct stem-cell fate. Nature 462:433-441.
7. Geblinger D, Addadi L, Geiger B (2010) Nano-topography sensing by osteoclasts. J Cell Sci 123:1503-1510.
8. Ishijima A, Yanagida T (2001) Single molecule nanobioscience. Trends Biochem Sci 26:438-444. (Pubitemid 32607486)
9. Gräslund A, Rigler R, Widengren J (2010) Single Molecule Spectroscopy in Chemistry, Physics and Biology (Springer, Berlin).
10. Piner RD, Zhu J, Xu F, Hong SH, Mirkin CA (1999) "Dip-pen" nanolithography. Science 283:661-663.
11. Lee KB, Lim JH, Mirkin CA (2003) Protein nanostructures formed via direct-write dip-pen nanolithography. J Am Chem Soc 125:5588-5589.
12. Wu C-C, et al. (2009) Porous multilayer-coated AFM tips for dip-pen nanolithography of proteins. J Am Chem Soc 131:7526-7527.
13. Irvine EJ, Hernandez-Santana A, Faulds K, Graham D (2011) Fabricating protein immunoassay arrays on nitrocellulose using dip-pen lithography techniques. Analyst 136:2925-2930.
14. Lee SW, et al. (2006) Biologically active protein nanoarrays generated using parallel Dip-pen nanolithography. Adv Mater 18:1133-1136.
15. Lee S, et al. (2009) Quantitative analysis of human serum leptin using a nanoarray protein chip based on single-molecule sandwich immunoassay. Talanta 78:608-612.
16. Palma M, et al. (2011) Selective biomolecular nanoarrays for parallel single-molecule investigations. J Am Chem Soc 133:7656-7659.
17. Schvartzman M, et al. (2011) Nanolithographic control of the spatial organization of cellular adhesion receptors at the single-molecule level. Nano Lett 11:1306-1312.
18. Nair PM, Salaita K, Petit RS, Groves JT (2011) Using patterned supported lipid membranes to investigate the role of receptor organization in intercellular signaling. Nat Protoc 6:523-539.
19. Chai J, et al. (2010) Scanning probe block copolymer lithography. Proc Natl Acad Sci USA 107:20202-20206.
20. Piner RD, Mirkin CA (1997) Effect of water on lateral force microscopy in air. Langmuir 13:6864-6868. (Pubitemid 127601869)
21. Rozhok S, Piner R, Mirkin CA (2003) Dip-pen nanolithography: What controls ink transport? J Phys Chem B 107:751-757.
22. Huo F, et al. (2008) Polymer pen lithography. Science 321:1658-1660.
23. Wong LS, Khan F, Micklefield J (2009) Selective covalent protein immobilization: Strategies and applications. Chem Rev 109:4025-4053.
24. Zehbe I, et al. (1997) Sensitive in situ hybridization with catalyzed reporter deposition, streptavidin-nanogold, and silver acetate autometallography-detection of singlecopy human papillomavirus. Am J Pathol 150:1553-1561. (Pubitemid 27193805)
25. Weipoltshammer K, Schöfer C, Almeder M, Wachtler F (2000) Signal enhancement at the electron microscopic level using nanogold and gold-based autometallography. Histochem Cell Biol 114:489-495. (Pubitemid 32039600)
26. Josephy PD, Eling T, Mason RP (1982) The horseradish peroxidase-catalyzed oxidation of 3,5,3′,5′-tetramethylbenzidine free radical and charge-transfer complex intermediates. J Biol Chem 257:3669-3675.
27. Hochuli E, Bannwarth W, Dobeli H, Gentz R, Stuber D (1988) Genetic approach to facilitate purification of recombinant proteins with a novel metal chelate adsorbent. Nat Biotechnol 6:1321-1325. (Pubitemid 18266749)
28. Hale JE, Beidler DE (1994) Purification of humanized murine and murine monoclonal antibodies using immobilized metal-affinity chromatography. Anal Biochem 222:29-33. (Pubitemid 24319521)
29. Hale JE (1995) Irreversible, oriented immobilization of antibodies to cobalt-iminodiacetate resin for use as immunoaffinity media. Anal Biochem 231:46-49.
30. Guddat LW, Herron JN, Edmundson AB (1993) Three-dimensional structure of a human immunoglobulin with a hinge deletion. Proc Natl Acad Sci USA 90:4271-4275. (Pubitemid 23134208)
31. Shim W, et al. (2011) Hard-tip, soft-spring lithography. Nature 469:516-520.
32. Arnold M, et al. (2004) Activation of integrin function by nanopatterned adhesive interfaces. Chem Phys Chem 5:383-388.
33. Wolfram T, Belz F, Schoen T, Spatz JP (2007) Site-specific presentation of single recombinant proteins in defined nanoarrays. Biointerphases 2:44-48.
34. Chen CS, Mrksich M, Huang S, Whitesides GM, Ingber DE (1997) Geometric control of cell life and death. Science 276:1425-1428. (Pubitemid 27235413)
35. Kilian KA, Bugarija B, Lahn BT, Mrksich M (2010) Geometric cues for directing the differentiation of mesenchymal stem cells. Proc Natl Acad Sci USA 107:4872-4877.
36. Lim J-H, et al. (2003) Direct-write dip-pen nanolithography of proteins on modified silicon oxide surfaces. Angew Chem Int Ed Engl 42:2309-2312. (Pubitemid 36682046)
37. Vega RA, Maspoch D, Salaita K, Mirkin CA (2005) Nanoarrays of single virus particles. Angew Chem Int Ed Engl 44:6013-6015. (Pubitemid 41345922)
38. Mirkin CA, et al. (2002) Direct patterning of modified oligonucleotides on metals and insulators by dip-pen nanolithography. Science 296:1836-1838. (Pubitemid 34596264)