-
1
-
-
0037227099
-
Multipotent cell lineages in early mouse development depend on SOX2 function
-
Avilion AA, Nicolis SK, Pevny LH, Perez L, Vivian N, Lovell-Badge R. 2003. Multipotent cell lineages in early mouse development depend on SOX2 function. Genes Dev 17: 126-140.
-
(2003)
Genes Dev
, vol.17
, pp. 126-140
-
-
Avilion, A.A.1
Nicolis, S.K.2
Pevny, L.H.3
Perez, L.4
Vivian, N.5
Lovell-Badge, R.6
-
2
-
-
33745923516
-
Role of Sox2 in the development of the mouse neocortex
-
Bani-Yaghoub M, Tremblay RG, Lei JX, Zhang D, Zurakowski B, Sandhu JK, Smith B, Ribecco-Lutkiewicz M, Kennedy J, Walker PR, et al. 2006. Role of Sox2 in the development of the mouse neocortex. Dev Biol 295: 52-66.
-
(2006)
Dev Biol
, vol.295
, pp. 52-66
-
-
Bani-Yaghoub, M.1
Tremblay, R.G.2
Lei, J.X.3
Zhang, D.4
Zurakowski, B.5
Sandhu, J.K.6
Smith, B.7
Ribecco-Lutkiewicz, M.8
Kennedy, J.9
Walker, P.R.10
-
3
-
-
33845715104
-
The establishment of neuronal properties is controlled by Sox4 and Sox11
-
Bergsland M, Werme M, Malewicz M, Perlmann T, Muhr J. 2006. The establishment of neuronal properties is controlled by Sox4 and Sox11. Genes Dev 20: 3475-3486.
-
(2006)
Genes Dev
, vol.20
, pp. 3475-3486
-
-
Bergsland, M.1
Werme, M.2
Malewicz, M.3
Perlmann, T.4
Muhr, J.5
-
4
-
-
82955247074
-
Sequentially acting Sox transcription factors in neural lineage development
-
(this issue). doi: 10.1101/gad.176008.111
-
Bergsland M, Ramsköld D, Zaouter C, Klum S, Sandberg R, Muhr J. 2011. Sequentially acting Sox transcription factors in neural lineage development. Genes Dev (this issue). doi: 10.1101/gad.176008.111.
-
(2011)
Genes Dev
-
-
Bergsland, M.1
Ramsköld, D.2
Zaouter, C.3
Klum, S.4
Sandberg, R.5
Muhr, J.6
-
5
-
-
84873734770
-
Organogenesis relies on Sox4, Sox11, and Sox12 for survival of neural and mesenchymal progenitor cells
-
doi: 10.1038/ncomms1008
-
Bhattaram P, Penzo-Méndez A, Sock E, Colmenares C, Kaneko KJ, DePamphilis ML, Wegner M, Lefebvre V. 2010. Organogenesis relies on Sox4, Sox11, and Sox12 for survival of neural and mesenchymal progenitor cells. Nat Commun 1: 9. doi: 10.1038/ncomms1008.
-
(2010)
Nat Commun
, vol.1
, pp. 9
-
-
Bhattaram, P.1
Penzo-Méndez, A.2
Sock, E.3
Colmenares, C.4
Kaneko, K.J.5
Depamphilis, M.L.6
Wegner, M.7
Lefebvre, V.8
-
6
-
-
25144525014
-
Core transcriptional regulatory circuitry in human embryonic stem cells
-
Boyer LA, Lee TI, Cole MF, Johnstone SE, Levine SS, Zucker JP, Guenther MG, Kumar RM, Murray HL, Jenner RG, et al. 2005. Core transcriptional regulatory circuitry in human embryonic stem cells. Cell 122: 947-956.
-
(2005)
Cell
, vol.122
, pp. 947-956
-
-
Boyer, L.A.1
Lee, T.I.2
Cole, M.F.3
Johnstone, S.E.4
Levine, S.S.5
Zucker, J.P.6
Guenther, M.G.7
Kumar, R.M.8
Murray, H.L.9
Jenner, R.G.10
-
7
-
-
0242353154
-
Vertebrate neurogenesis is counteracted by Sox1-3 activity
-
Bylund M, Andersson E, Novitch BG, Muhr J. 2003. Vertebrate neurogenesis is counteracted by Sox1-3 activity. Nat Neurosci 6: 1162-1168.
-
(2003)
Nat Neurosci
, vol.6
, pp. 1162-1168
-
-
Bylund, M.1
Andersson, E.2
Novitch, B.G.3
Muhr, J.4
-
8
-
-
41649112154
-
Impaired generation of mature neurons by neural stem cells from hypomorphic Sox2 mutants
-
Cavallaro M, Mariani J, Lancini C, Latorre E, Caccia R, Gullo F, Valotta M, Debiasi S, Spinardi L, Ronchi A, et al. 2008. Impaired generation of mature neurons by neural stem cells from hypomorphic Sox2 mutants. Development 135: 541-557.
-
(2008)
Development
, vol.135
, pp. 541-557
-
-
Cavallaro, M.1
Mariani, J.2
Lancini, C.3
Latorre, E.4
Caccia, R.5
Gullo, F.6
Valotta, M.7
Debiasi, S.8
Spinardi, L.9
Ronchi, A.10
-
9
-
-
44649117905
-
Integration of external signaling pathways with the core transcriptional network in embryonic stem cells
-
Chen X, Xu H, Yuan P, Fang F, Huss M, Vega VB, Wong E, Orlov YL, Zhang W, Jiang J, et al. 2008. Integration of external signaling pathways with the core transcriptional network in embryonic stem cells. Cell 133: 1106-1117.
-
(2008)
Cell
, vol.133
, pp. 1106-1117
-
-
Chen, X.1
Xu, H.2
Yuan, P.3
Fang, F.4
Huss, M.5
Vega, V.B.6
Wong, E.7
Orlov, Y.L.8
Zhang, W.9
Jiang, J.10
-
11
-
-
0030039291
-
A comparison of the properties of Sox-3 with Sry and two related genes, Sox-1 and Sox-2
-
Collignon J, Sockanathan S, Hacker A, Cohentannoudji M, Norris D, Rastan S, Stevanovic M, Goodfellow PN, Lovellbadge R. 1996. A comparison of the properties of Sox-3 with Sry and two related genes, Sox-1 and Sox-2. Development 122: 509-520.
-
(1996)
Development
, vol.122
, pp. 509-520
-
-
Collignon, J.1
Sockanathan, S.2
Hacker, A.3
Cohentannoudji, M.4
Norris, D.5
Rastan, S.6
Stevanovic, M.7
Goodfellow, P.N.8
Lovellbadge, R.9
-
12
-
-
42649094468
-
Global transcription in pluripotent embryonic stem cells
-
Efroni S, Duttagupta R, Cheng J, Dehghani H, Hoeppner DJ, Dash C, Bazett-Jones DP, Le Grice S, McKay RD, Buetow KH, et al. 2008. Global transcription in pluripotent embryonic stem cells. Cell Stem Cell 2: 437-447.
-
(2008)
Cell Stem Cell
, vol.2
, pp. 437-447
-
-
Efroni, S.1
Duttagupta, R.2
Cheng, J.3
Dehghani, H.4
Hoeppner, D.J.5
Dash, C.6
Bazett-Jones, D.P.7
le Grice, S.8
McKay, R.D.9
Buetow, K.H.10
-
13
-
-
70349559758
-
Hippocampal development and neural stem cell maintenance require Sox2-dependent regulation of Shh
-
Favaro R, Valotta M, Ferri AL, Latorre E, Mariani J, Giachino C, Lancini C, Tosetti V, Ottolenghi S, Taylor V, et al. 2009. Hippocampal development and neural stem cell maintenance require Sox2-dependent regulation of Shh. Nat Neurosci 12: 1248-1256.
-
(2009)
Nat Neurosci
, vol.12
, pp. 1248-1256
-
-
Favaro, R.1
Valotta, M.2
Ferri, A.L.3
Latorre, E.4
Mariani, J.5
Giachino, C.6
Lancini, C.7
Tosetti, V.8
Ottolenghi, S.9
Taylor, V.10
-
14
-
-
4444378766
-
Sox2 deficiency causes neurodegeneration and impaired neurogenesis in the adult mouse brain
-
Ferri ALM, Cavallaro M, Braida D, Di Cristofano A, Canta A, Vezzani A, Ottolenghi S, Pandolfi PP, Sala M, DeBiasi S, et al. 2004. Sox2 deficiency causes neurodegeneration and impaired neurogenesis in the adult mouse brain. Development 131: 3805-3819.
-
(2004)
Development
, vol.131
, pp. 3805-3819
-
-
Ferri, A.L.M.1
Cavallaro, M.2
Braida, D.3
di Cristofano, A.4
Canta, A.5
Vezzani, A.6
Ottolenghi, S.7
Pandolfi, P.P.8
Sala, M.9
Debiasi, S.10
-
15
-
-
68949164755
-
Chd1 regulates open chromatin and pluripotency of embryonic stem cells
-
Gaspar-Maia A, Alajem A, Polesso F, Sridharan R, Mason MJ, Heidersbach A, Ramalho-Santos J, McManus MT, Plath K, Meshorer E, et al. 2009. Chd1 regulates open chromatin and pluripotency of embryonic stem cells. Nature 460: 863-868.
-
(2009)
Nature
, vol.460
, pp. 863-868
-
-
Gaspar-Maia, A.1
Alajem, A.2
Polesso, F.3
Sridharan, R.4
Mason, M.J.5
Heidersbach, A.6
Ramalho-Santos, J.7
McManus, M.T.8
Plath, K.9
Meshorer, E.10
-
16
-
-
0041880122
-
SOX2 functions to maintain neural progenitor identity
-
Graham V, Khudyakov J, Ellis P, Pevny L. 2003. SOX2 functions to maintain neural progenitor identity. Neuron 39: 749-765.
-
(2003)
Neuron
, vol.39
, pp. 749-765
-
-
Graham, V.1
Khudyakov, J.2
Ellis, P.3
Pevny, L.4
-
17
-
-
34447098370
-
A chromatin landmark and transcription initiation at most promoters in human cells
-
Guenther MG, Levine SS, Boyer LA, Jaenisch R, Young RA. 2007. A chromatin landmark and transcription initiation at most promoters in human cells. Cell 130: 77-88.
-
(2007)
Cell
, vol.130
, pp. 77-88
-
-
Guenther, M.G.1
Levine, S.S.2
Boyer, L.A.3
Jaenisch, R.4
Young, R.A.5
-
18
-
-
53049088719
-
Having it both ways: Sox protein function between conservation and innovation
-
Guth SIE, Wegner M. 2008. Having it both ways: Sox protein function between conservation and innovation. Cell Mol Life Sci 65: 3000-3018.
-
(2008)
Cell Mol Life Sci
, vol.65
, pp. 3000-3018
-
-
Guth, S.I.E.1
Wegner, M.2
-
19
-
-
47949105017
-
Sox12 deletion in the mouse reveals non-reciprocal redundancy with the related Sox4 and Sox11 transcription factors
-
Hoser M, Potzner MR, Koch JMC, Bösl MR, Wegner M, Sock E. 2008. Sox12 deletion in the mouse reveals non-reciprocal redundancy with the related Sox4 and Sox11 transcription factors. Mol Cell Biol 28: 4675-4687.
-
(2008)
Mol Cell Biol
, vol.28
, pp. 4675-4687
-
-
Hoser, M.1
Potzner, M.R.2
Koch, J.M.C.3
Bösl, M.R.4
Wegner, M.5
Sock, E.6
-
20
-
-
0034175998
-
Pairing SOX off: With partners in the regulation of embryonic development
-
Kamachi Y, Uchikawa M, Kondoh H. 2000. Pairing SOX off: With partners in the regulation of embryonic development. Trends Genet 16: 182-187.
-
(2000)
Trends Genet
, vol.16
, pp. 182-187
-
-
Kamachi, Y.1
Uchikawa, M.2
Kondoh, H.3
-
21
-
-
55449105221
-
Genomewide analysis of PRC1 and PRC2 occupancy identifies two classes of bivalent domains
-
doi: 10.1371/journal.pgen.1000242
-
Ku M, Koche RP, Rheinbay E, Mendenhall EM, Endoh M, Mikkelsen TS, Presser A, Nusbaum C, Xie X, Chi AS, et al. 2008. Genomewide analysis of PRC1 and PRC2 occupancy identifies two classes of bivalent domains. PLoS Genet 4: e1000242. doi: 10.1371/journal.pgen.1000242.
-
(2008)
PLoS Genet
, vol.4
-
-
Ku, M.1
Koche, R.P.2
Rheinbay, E.3
Mendenhall, E.M.4
Endoh, M.5
Mikkelsen, T.S.6
Presser, A.7
Nusbaum, C.8
Xie, X.9
Chi, A.S.10
-
22
-
-
77957672080
-
Epigenetic priming of a pre-B cell-specific enhancer through binding of Sox2 and Foxd3 at the ESC stage
-
Liber D, Domaschenz R, Holmqvist PH, Mazzarella L, Georgiou A, Leleu M, Fisher AG, Labosky PA, Dillon N. 2010. Epigenetic priming of a pre-B cell-specific enhancer through binding of Sox2 and Foxd3 at the ESC stage. Cell Stem Cell 7: 114-126.
-
(2010)
Cell Stem Cell
, vol.7
, pp. 114-126
-
-
Liber, D.1
Domaschenz, R.2
Holmqvist, P.H.3
Mazzarella, L.4
Georgiou, A.5
Leleu, M.6
Fisher, A.G.7
Labosky, P.A.8
Dillon, N.9
-
23
-
-
80054084614
-
Pioneer factors: Directing transcriptional regulators within the chromatin environment
-
Magnani L, Eeckhoute J, Lupien M. 2011. Pioneer factors: Directing transcriptional regulators within the chromatin environment. Trends Genet 27: 465-474.
-
(2011)
Trends Genet
, vol.27
, pp. 465-474
-
-
Magnani, L.1
Eeckhoute, J.2
Lupien, M.3
-
24
-
-
0038062630
-
Sox1-deficient mice suffer from epilepsy associated with abnormal ventral forebrain development and olfactory cortex hyperexcitability
-
Malas S, Postlethwaite M, Ekonomou A, Whalley B, Nishiguchi S, Wood H, Meldrum B, Constanti A, Episkopou V. 2003. Sox1-deficient mice suffer from epilepsy associated with abnormal ventral forebrain development and olfactory cortex hyperexcitability. Neuroscience 119: 421-432.
-
(2003)
Neuroscience
, vol.119
, pp. 421-432
-
-
Malas, S.1
Postlethwaite, M.2
Ekonomou, A.3
Whalley, B.4
Nishiguchi, S.5
Wood, H.6
Meldrum, B.7
Constanti, A.8
Episkopou, V.9
-
25
-
-
48449084118
-
Connecting microRNA genes to the core transcriptional regulatory circuitry of embryonic stem cells
-
Marson A, Levine SS, Cole MF, Frampton GM, Brambrink T, Johnstone S, Guenther MG, Johnston WK, Wernig M, Newman J, et al. 2008. Connecting microRNA genes to the core transcriptional regulatory circuitry of embryonic stem cells. Cell 134: 521-533.
-
(2008)
Cell
, vol.134
, pp. 521-533
-
-
Marson, A.1
Levine, S.S.2
Cole, M.F.3
Frampton, G.M.4
Brambrink, T.5
Johnstone, S.6
Guenther, M.G.7
Johnston, W.K.8
Wernig, M.9
Newman, J.10
-
26
-
-
29744447772
-
Hyperdynamic plasticity of chromatin proteins in pluripotent embryonic stem cells
-
Meshorer E, Yellajoshula D, George E, Scambler PJ, Brown DT, Misteli T. 2006. Hyperdynamic plasticity of chromatin proteins in pluripotent embryonic stem cells. Dev Cell 10: 105-116.
-
(2006)
Dev Cell
, vol.10
, pp. 105-116
-
-
Meshorer, E.1
Yellajoshula, D.2
George, E.3
Scambler, P.J.4
Brown, D.T.5
Misteli, T.6
-
27
-
-
34547624303
-
Genome-wide maps of chromatin state in pluripotent and lineage-committed cells
-
Mikkelsen TS, Ku M, Jaffe DB, Issac B, Lieberman E, Giannoukos G, Alvarez P, Brockman W, Kim TK, Koche RP, et al. 2007. Genome-wide maps of chromatin state in pluripotent and lineage-committed cells. Nature 448: 553-560.
-
(2007)
Nature
, vol.448
, pp. 553-560
-
-
Mikkelsen, T.S.1
Ku, M.2
Jaffe, D.B.3
Issac, B.4
Lieberman, E.5
Giannoukos, G.6
Alvarez, P.7
Brockman, W.8
Kim, T.K.9
Koche, R.P.10
-
28
-
-
47849109532
-
Consequence of the loss of Sox2 in the developing brain of the mouse
-
Miyagi S, Masui S, Niwa H, Saito T, Shimazaki T, Okano H, Nishimoto M, Muramatsu M, Iwama A, Okuda A. 2008. Consequence of the loss of Sox2 in the developing brain of the mouse. FEBS Lett 582: 2811-2815.
-
(2008)
FEBS Lett
, vol.582
, pp. 2811-2815
-
-
Miyagi, S.1
Masui, S.2
Niwa, H.3
Saito, T.4
Shimazaki, T.5
Okano, H.6
Nishimoto, M.7
Muramatsu, M.8
Iwama, A.9
Okuda, A.10
-
31
-
-
72849134873
-
Transcriptional competence in pluripotency
-
Ram EV, Meshorer E. 2009. Transcriptional competence in pluripotency. Genes Dev 23: 2793-2798.
-
(2009)
Genes Dev
, vol.23
, pp. 2793-2798
-
-
Ram, E.V.1
Meshorer, E.2
-
32
-
-
23044451795
-
Sox21 promotes the progression of vertebrate neurogenesis
-
Sandberg M, Källstrom M, Muhr J. 2005. Sox21 promotes the progression of vertebrate neurogenesis. Nat Neurosci 8: 995-1001.
-
(2005)
Nat Neurosci
, vol.8
, pp. 995-1001
-
-
Sandberg, M.1
Källstrom, M.2
Muhr, J.3
-
33
-
-
0036696817
-
Twenty pairs of Sox: Extent, homology, and nomenclature of the mouse and human Sox transcription factor families
-
Schepers GE, Taesdale RD, Koopman P. 2002. Twenty pairs of Sox: Extent, homology, and nomenclature of the mouse and human Sox transcription factor families. Dev Cell 3: 167-170.
-
(2002)
Dev Cell
, vol.3
, pp. 167-170
-
-
Schepers, G.E.1
Taesdale, R.D.2
Koopman, P.3
-
34
-
-
77956648493
-
Pioneer factors in embryonic stem cells and differentiation
-
Smale ST. 2010. Pioneer factors in embryonic stem cells and differentiation. Curr Opin Genet Dev 20: 519-526.
-
(2010)
Curr Opin Genet Dev
, vol.20
, pp. 519-526
-
-
Smale, S.T.1
-
35
-
-
3242670531
-
Gene targeting reveals a widespread role for the highmobility-group transcription factor Sox11 in tissue remodeling
-
Sock E, Rettig SD, Enderich J, Bösl MR, Tamm ER, Wegner M. 2004. Gene targeting reveals a widespread role for the highmobility-group transcription factor Sox11 in tissue remodeling. Mol Cell Biol 24: 6635-6644.
-
(2004)
Mol Cell Biol
, vol.24
, pp. 6635-6644
-
-
Sock, E.1
Rettig, S.D.2
Enderich, J.3
Bösl, M.R.4
Tamm, E.R.5
Wegner, M.6
-
36
-
-
33747195353
-
Induction of pluripotent stem cells from mouse embryonic and adult fibroblast cultures by defined factors
-
Takahashi K, Yamanaka S. 2006. Induction of pluripotent stem cells from mouse embryonic and adult fibroblast cultures by defined factors. Cell 126: 663-676.
-
(2006)
Cell
, vol.126
, pp. 663-676
-
-
Takahashi, K.1
Yamanaka, S.2
-
37
-
-
33745147915
-
SOX2 is a dose-dependent regulator of retinal neural progenitor competence
-
Taranova OV, Magness ST, Fagan BM, Wu Y, Surzenko N, Hutton SR, Pevny LH. 2006. SOX2 is a dose-dependent regulator of retinal neural progenitor competence. Genes Dev 20: 1187-1202.
-
(2006)
Genes Dev
, vol.20
, pp. 1187-1202
-
-
Taranova, O.V.1
Magness, S.T.2
Fagan, B.M.3
Wu, Y.4
Surzenko, N.5
Hutton, S.R.6
Pevny, L.H.7
-
38
-
-
77956609928
-
The closely related transcription factors Sox4 and Sox11 function as survival factors during spinal cord development
-
Thein DC, Thalhammer JM, Hartwig AC, Crenshaw EB 3rd, Lefebvre V, Wegner M, Sock E. 2010. The closely related transcription factors Sox4 and Sox11 function as survival factors during spinal cord development. J Neurochem 115: 131-141.
-
(2010)
J Neurochem
, vol.115
, pp. 131-141
-
-
Thein, D.C.1
Thalhammer, J.M.2
Hartwig, A.C.3
Crenshaw III., E.B.4
Lefebvre, V.5
Wegner, M.6
Sock, E.7
-
39
-
-
0032789437
-
Two distinct subgroups of Group B Sox genes for transcriptional activators and repressors: Their expression during embryonic organogenesis of the chicken
-
Uchikawa M, Kamachi Y, Kondoh H. 1999. Two distinct subgroups of Group B Sox genes for transcriptional activators and repressors: Their expression during embryonic organogenesis of the chicken. Mech Dev 84: 103-120.
-
(1999)
Mech Dev
, vol.84
, pp. 103-120
-
-
Uchikawa, M.1
Kamachi, Y.2
Kondoh, H.3
-
40
-
-
76549090706
-
All purpose Sox: The many roles of Sox proteins in gene expression
-
Wegner M. 2010. All purpose Sox: The many roles of Sox proteins in gene expression. Int J Biochem Cell Biol 42: 381-390.
-
(2010)
Int J Biochem Cell Biol
, vol.42
, pp. 381-390
-
-
Wegner, M.1
-
41
-
-
26944436250
-
From stem cells to neurons and glia: A soxist's view of neural development
-
Wegner M, Stolt CC. 2005. From stem cells to neurons and glia: A soxist's view of neural development. Trends Neurosci 28: 583-588.
-
(2005)
Trends Neurosci
, vol.28
, pp. 583-588
-
-
Wegner, M.1
Stolt, C.C.2
-
42
-
-
0030899667
-
Architectural transcription factors: Proteins that remodel DNA
-
Werner MH, Burley SK. 1997. Architectural transcription factors: Proteins that remodel DNA. Cell 88: 733-736.
-
(1997)
Cell
, vol.88
, pp. 733-736
-
-
Werner, M.H.1
Burley, S.K.2
-
43
-
-
72849110608
-
Transcriptional competence and the active marking of tissue-specific enhancers by defined transcription factors in embryonic and induced pluripotent stem cells
-
Xu J, Watts JA, Pope SD, Gadue P, Kamps M, Plath K, Zaret KS, Smale ST. 2009. Transcriptional competence and the active marking of tissue-specific enhancers by defined transcription factors in embryonic and induced pluripotent stem cells. Genes Dev 23: 2824-2838.
-
(2009)
Genes Dev
, vol.23
, pp. 2824-2838
-
-
Xu, J.1
Watts, J.A.2
Pope, S.D.3
Gadue, P.4
Kamps, M.5
Plath, K.6
Zaret, K.S.7
Smale, S.T.8
|