-
1
-
-
18744371588
-
Molecular Dynamics and Protein Function
-
Karplus M, Kuriyan. Molecular Dynamics and Protein Function. J Proc Natl Acad Sci U S A. 2005;102(19):6679–85.
-
(2005)
J Proc Natl Acad Sci U S A
, vol.102
, Issue.19
, pp. 667985
-
-
Karpluskuriyan, M.1
-
2
-
-
33746271105
-
Biomolecular Modeling: Goals, Problems, Perspectives
-
van Gunsteren WF, Bakowies D, Baron R, et al. Biomolecular Modeling: Goals, Problems, Perspectives. Angew Chem Int Ed Engl. 2006;45(25): 4064–92.
-
(2006)
Angew Chem Int Ed Engl
, vol.45
, Issue.25
, pp. 406492
-
-
van Gunsteren, W.F.1
Bakowies, D.2
Baron, R.3
-
3
-
-
57849133445
-
Biochemical Studies and Molecular Dynamics Simulations of Smad3-Erbin Interaction Identify a Non-Classical Erbin PDZ Binding
-
Deliot N, Chavent M, Nourry C, et al. Biochemical Studies and Molecular Dynamics Simulations of Smad3-Erbin Interaction Identify a Non-Classical Erbin PDZ Binding. Biochem Biophys Res Commun. 2009;378(3):360–5.
-
(2009)
Biochem Biophys Res Commun
, vol.378
, Issue.3
, pp. 3605
-
-
Deliot, N.1
Chavent, M.2
Nourry, C.3
-
4
-
-
66149156564
-
The Effect of Asp54 Phosphorylation on the Energetics and Dynamics in the Response Regulator Protein Spo0F Studied by Molecular Dynamics
-
Peters GH. The Effect of Asp54 Phosphorylation on the Energetics and Dynamics in the Response Regulator Protein Spo0F Studied by Molecular Dynamics. Proteins. 2009;75(3):648–58.
-
(2009)
Proteins
, vol.75
, Issue.3
, pp. 64858
-
-
Peters, G.H.1
-
5
-
-
0035789518
-
GROMACS 3.0: A Package for Molecular Simulation and Trajectory Analysis
-
Lindahl E, Hess B, van der Spoel D. GROMACS 3.0: A Package for Molecular Simulation and Trajectory Analysis. J Mol Model. 2001;7(8): 306–17.
-
(2001)
J Mol Model
, vol.7
, Issue.8
, pp. 30617
-
-
Lindahl, E.1
Hess, B.2
van der Spoel, D.3
-
6
-
-
27344454932
-
GROMACS: Fast, Flexible, and Free
-
Van der Spoel D, Lindahl E, Hess B, Groenhof G, Mark AE, Berendsen HJ. GROMACS: Fast, Flexible, and Free. J Comput Chem. 2005;26(16):1701–18.
-
(2005)
J Comput Chem
, vol.26
, Issue.16
, pp. 170118
-
-
van der Spoel, D.1
Lindahl, E.2
Hess, B.3
Groenhof, G.4
Mark, A.E.5
Berendsen, H.J.6
-
7
-
-
46249092554
-
GROMACS 4: Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation
-
Hess B, Kutzner C, van der Spoel D, Lindahl E. GROMACS 4: Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation. J Chem Theory Comput. 2008;4:435–47.
-
(2008)
J Chem Theory Comput
, vol.4
, pp. 43547
-
-
Hess, B.1
Kutzner, C.2
van der Spoel, D.3
Lindahl, E.4
-
8
-
-
85124901739
-
-
http://www.gromacs.org/WIKI-import/GUI
-
-
-
-
9
-
-
34547241687
-
Speeding Up Parallel GROMACS on High-Latency Networks
-
Kutzner C, van der Spoel D, Fechner M, et al. Speeding Up Parallel GROMACS on High-Latency Networks. J Comput Chem. 2007;28(12): 2075–84.
-
(2007)
J Comput Chem
, vol.28
, Issue.12
, pp. 207584
-
-
Kutzner, C.1
van der Spoel, D.2
Fechner, M.3
-
10
-
-
33749172039
-
Carma: A Molecular Dynamics Analysis Program
-
Glykos NM. Carma: a Molecular Dynamics Analysis Program. J Comput Chem. 2006;27(14):1765–8.
-
(2006)
J Comput Chem
, vol.27
, Issue.14
, pp. 17658
-
-
Glykos, N.M.1
|