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Volumn 3, Issue , 2009, Pages 99-102

Gromita: A Fully Integrated Graphical User Interface to Gromacs 4

Author keywords

Cross platform; Graphical user interface; Gromacs; Molecular dynamics; Simulation

Indexed keywords


EID: 82755197570     PISSN: None     EISSN: 11779322     Source Type: Journal    
DOI: 10.4137/BBI.S3207     Document Type: Review
Times cited : (36)

References (10)
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    • Karpluskuriyan, M.1
  • 2
    • 33746271105 scopus 로고    scopus 로고
    • Biomolecular Modeling: Goals, Problems, Perspectives
    • van Gunsteren WF, Bakowies D, Baron R, et al. Biomolecular Modeling: Goals, Problems, Perspectives. Angew Chem Int Ed Engl. 2006;45(25): 4064–92.
    • (2006) Angew Chem Int Ed Engl , vol.45 , Issue.25 , pp. 406492
    • van Gunsteren, W.F.1    Bakowies, D.2    Baron, R.3
  • 3
    • 57849133445 scopus 로고    scopus 로고
    • Biochemical Studies and Molecular Dynamics Simulations of Smad3-Erbin Interaction Identify a Non-Classical Erbin PDZ Binding
    • Deliot N, Chavent M, Nourry C, et al. Biochemical Studies and Molecular Dynamics Simulations of Smad3-Erbin Interaction Identify a Non-Classical Erbin PDZ Binding. Biochem Biophys Res Commun. 2009;378(3):360–5.
    • (2009) Biochem Biophys Res Commun , vol.378 , Issue.3 , pp. 3605
    • Deliot, N.1    Chavent, M.2    Nourry, C.3
  • 4
    • 66149156564 scopus 로고    scopus 로고
    • The Effect of Asp54 Phosphorylation on the Energetics and Dynamics in the Response Regulator Protein Spo0F Studied by Molecular Dynamics
    • Peters GH. The Effect of Asp54 Phosphorylation on the Energetics and Dynamics in the Response Regulator Protein Spo0F Studied by Molecular Dynamics. Proteins. 2009;75(3):648–58.
    • (2009) Proteins , vol.75 , Issue.3 , pp. 64858
    • Peters, G.H.1
  • 5
    • 0035789518 scopus 로고    scopus 로고
    • GROMACS 3.0: A Package for Molecular Simulation and Trajectory Analysis
    • Lindahl E, Hess B, van der Spoel D. GROMACS 3.0: A Package for Molecular Simulation and Trajectory Analysis. J Mol Model. 2001;7(8): 306–17.
    • (2001) J Mol Model , vol.7 , Issue.8 , pp. 30617
    • Lindahl, E.1    Hess, B.2    van der Spoel, D.3
  • 7
    • 46249092554 scopus 로고    scopus 로고
    • GROMACS 4: Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation
    • Hess B, Kutzner C, van der Spoel D, Lindahl E. GROMACS 4: Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation. J Chem Theory Comput. 2008;4:435–47.
    • (2008) J Chem Theory Comput , vol.4 , pp. 43547
    • Hess, B.1    Kutzner, C.2    van der Spoel, D.3    Lindahl, E.4
  • 8
    • 85124901739 scopus 로고    scopus 로고
    • http://www.gromacs.org/WIKI-import/GUI
  • 9
    • 34547241687 scopus 로고    scopus 로고
    • Speeding Up Parallel GROMACS on High-Latency Networks
    • Kutzner C, van der Spoel D, Fechner M, et al. Speeding Up Parallel GROMACS on High-Latency Networks. J Comput Chem. 2007;28(12): 2075–84.
    • (2007) J Comput Chem , vol.28 , Issue.12 , pp. 207584
    • Kutzner, C.1    van der Spoel, D.2    Fechner, M.3
  • 10
    • 33749172039 scopus 로고    scopus 로고
    • Carma: A Molecular Dynamics Analysis Program
    • Glykos NM. Carma: a Molecular Dynamics Analysis Program. J Comput Chem. 2006;27(14):1765–8.
    • (2006) J Comput Chem , vol.27 , Issue.14 , pp. 17658
    • Glykos, N.M.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.