Interactions between polyamines and abiotic stress pathway responses unraveled by transcriptome analysis of polyamine overproducers

OMICS A Journal of Integrative Biology

Volumn 15, Issue 11, 2011, Pages 775-781

  Marco, Francisco ^a   Alcázar, Rubén ^b   Tiburcio, Antonio F ^c   Carrasco, Pedro ^a  

^a UNIVERSITY OF VALENCIA   (Spain)

^b MAX PLANCK INSTITUTE FOR PLANT BREEDING RESEARCH   (Germany)

^c UNIVERSITY OF BARCELONA   (Spain)

Author keywords

[No Author keywords available]

Indexed keywords

ABSCISIC ACID; CALCIUM ION; POLYAMINE DERIVATIVE; PUTRESCINE; SPERMINE; TRANSCRIPTOME;

ABIOTIC STRESS; ARABIDOPSIS; NONHUMAN; PLANT DEVELOPMENT; PLANT GENE; PLANT GENETICS; PLANT GROWTH; PRIORITY JOURNAL; PRODUCTIVITY; REVIEW; TRANSGENIC PLANT;

ABSCISIC ACID; ARABIDOPSIS; CALCIUM SIGNALING; GENOME, PLANT; MODELS, BIOLOGICAL; PLANTS, GENETICALLY MODIFIED; POLYAMINES; SIGNAL TRANSDUCTION; STRESS, PHYSIOLOGICAL; TRANSCRIPTOME;

EID: 82355169406     PISSN: 15362310     EISSN: 15578100     Source Type: Journal    
DOI: 10.1089/omi.2011.0084     Document Type: Review

References (38)

1. Alcázar, R., Garcia-Martinez, J.L., Cuevas, J.C., Tiburcio, A.F., and Altabella, T. (2005). Overexpression of ADC2 in Arabidopsis induces dwarfism and late-flowering through GA deficiency. Plant J 43, 425-436. (Pubitemid 41577009)
2. Alcázar, R., Cuevas, J.C., Patron, M., Altabella, T., and Tiburcio, A.F. (2006a). Abscisic acid modulates polyamine metabolism under water stress in Arabidopsis thaliana. Physiol Plant 128, 448-455. (Pubitemid 44610437)
3. Alcázar, R., Marco, F., Cuevas, J.C., Patron, M., Ferrando, A., Carrasco, P., et al. (2006b). Involvement of polyamines in plant response to abiotic stress. Biotechnol Lett 28, 1867-1876. (Pubitemid 44744794)
4. Alcázar, R., Altabella, T., Marco, F., Bortolotti, C., Reymond, M., Koncz, C., et al. (2010a). Polyamines: molecules with regulatory functions in plant abiotic stress tolerance. Planta 231, 1237-1249.
5. Alcázar, R., Planas, J., Saxena, T., Zarza, X., Bortolotti, C., Cuevas, J., et al. (2010b). Putrescine accumulation confers drought tolerance in transgenic Arabidopsis plants over-expressing the homologous Arginine decarboxylase 2 gene. Plant Physiol Biochem 48, 547-552.
6. Bannenberg, G., Martínez, M., Hamberg, M., and Castresana, C. (2009). Diversity of the enzymatic activity in the lipoxygenase gene family of Arabidopsis thaliana. Lipids 44, 85-95.
7. Bouchereau, A., Aziz, A., Larher, F., and Martin-Tanguy, J. (1999). Polyamines and environmental challenges: recent development. Plant Sci 140, 103-125. (Pubitemid 29086551)
8. Carmona-Saez, P., Chagoyen, M., Tirado, F., Carazo, J.M., and Pascual-Montano, A. (2007). GENECODIS: a web-based tool for finding significant concurrent annotations in gene lists. Genome Biol 8.
9. Cuevas, J.C., Lopez-Cobollo, R., Alcázar, R., Zarza, X., Koncz, C., Altabella, T., et al. (2008). Putrescine is involved in Arabidopsis freezing tolerance and cold acclimation by regulating abscisic acid levels in response to low temperature. Plant Physiol 148, 1094-1105. (Pubitemid 352847555)
10. Cuevas, J.C., Lopez-Cobollo, R., Alcázar, R., Zarza, X., Koncz, C., Altabella, T., et al. (2009). Putrescine as a signal to modulate the indispensable ABA increase under cold stress. Plant Signal Behav 4, 219-220.
11. Gill, S., and Tuteja, N. (2010). Polyamines and abiotic stress tolerance in plants. Plant Signal Behav 5, 26-33.
12. González, M.E., Marco, F., Gómez, E., Carrasco, P., Blázquez, M.J., Carbonell, J., et al. (2011). Perturbation of spermine synthase gene expression and transcript profiling provide new insights on the role of the tetraamine spermine in Arabidopsis thaliana defense against Pseudomonas viridiflava. Plant Physiol 156, 2266-2277.
13. Groppa, M.D., and Benavides, M.P. (2008). Polyamines and abiotic stress: recent advances. Amino Acids 34, 35-45.
14. Hanfrey, C., Franceschetti, M., Mayer, M.J., Illingworth, C., Elliott, K., Collier, M., et al. (2003). Translational regulation of the plant S-adenosylmethionine decarboxylase. Biochem Soc Trans 31, 424-427. (Pubitemid 36520690)
15. Hanzawa, Y., Imai, A., Michael, A.J., Komeda, Y., and Takahashi, T. (2002). Characterization of the spermidine synthaserelated gene family in Arabidopsis thaliana. FEBS Lett 527, 176-180. (Pubitemid 35253861)
16. Igarashi, K., and Kashiwagi, K. (2006). Polyamine modulon in Escherichia coli: genes involved in the stimulation of cell growth by polyamines. J Biochem 139, 11-16. (Pubitemid 43258841)
17. Iwata, Y., and Koizumi, N. (2005). An Arabidopsis transcription factor, AtbZIP60, regulates the endoplasmic reticulum stress response in a manner unique to plants. Proc Natl Acad Sci USA 102, 5280-5285.
18. Janowitz, T., Kneifel, H., and Piotrowski, M. (2003). Identification and characterization of plant agmatine iminohydrolase, the last missing link in polyamine biosynthesis of plants. FEBS Lett 544, 258-261. (Pubitemid 36628073)
19. Kakehi, J.I., Kuwashiro, Y., Niitsu, M., and Takahashi, T. (2008). Thermospermine is required for stem elongation in Arabidopsis thaliana. Plant Cell Physiol 49, 1342-1349.
20. Knott, J.M., Romer, P., and Sumper, M. (2007). Putative spermine synthases from Thalassiosira pseudonana and Arabidopsis thaliana synthesize thermospermine rather than spermine. FEBS Lett 581, 3081-3086. (Pubitemid 46899055)
21. Marco, F., Buso, E., Gruissem, W., Lafuente, T., and Carrasco, P. (2011). A possible role for spermine signalling during abiotic stress. Plant Physiol (in press).
22. Mitsuya, Y., Takahashi, Y., Berberich, T., Miyazaki, A., Matsumura, H., Takahashi, H., et al. (2009). Spermine signaling plays a significant role in the defense response of Arabidopsis thaliana to cucumber mosaic virus. J Plant Physiol 166, 626-643.
23. Nogales-Cadenas, R., Carmona-Saez, P., Vazquez, M., Vicente, C., Yang, X., Tirado, F., et al. (2009). GeneCodis: interpreting gene lists through enrichment analysis and integration of diverse biological information. Nucleic Acids Res 37, W317-W322.
24. Panicot, M., Minguet, E.G., Ferrando, A., Alcazar, R., Blazquez, M.A., Carbonell, J., et al. (2002). A polyamine metabolon involving aminopropyl transferase complexes in Arabidopsis. Plant Cell 14, 2539-2551. (Pubitemid 35224848)
25. Piotrowski, M., Janowitz, T., and Kneifel, H. (2003). Plant C-N hydrolases and the identification of a plant N-carbamoylputrescine amidohydrolase involved in polyamine biosynthesis. J Biol Chem 278, 1708-1712. (Pubitemid 36801404)
26. Schwartz, S.H., Tan, B.C., Gage, D.A., Zeevaart, J.A.D., and McCarty, D.R. (1997). Specific oxidative cleavage of carotenoids by VP14 of maize. Science 276, 1872-1874. (Pubitemid 27443666)
27. Takahashi, Y., Berberich, T., Miyazaki, A., Seo, S., Ohashi, Y., and Kusano, T. (2003). Spermine signalling in tobacco: activation of mitogen-activated protein kinases by spermine is mediated through mitochondrial dysfunction. Plant J 36, 820-829. (Pubitemid 38069769)
28. Thimm, O., Blasing, O., Gibon, Y., Nagel, A., Meyer, S., Kruger, P., et al. (2004). MAPMAN: a user-driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processes. Plant J 37, 914-939. (Pubitemid 38370342)
29. Tiburcio, A.F., Altabella, T., and Ferrando, A. (2009). Plant with resistance to low temperature and method of production thereof. Spanish patent application WO2010/004070.
30. Toufighi, K., Brady, S.M., Austin, R., L.E., and Provart, N.J. (2005). The botany array resource: e-Northerns, expression angling, and promoter analyses. Plant J 43, 153-163. (Pubitemid 40962743)
31. Tusher, V.G., Tibshirani, R., and Chu, G. (2001). Significance analysis of microarrays applied to the ionizing radiation response. Proc Natl Acad Sci USA 98, 5116-5121. (Pubitemid 32397092)
32. Uemura, T., Higashi, K., Takigawa, M., Toida, T., Kashiwagi, K., and Igarashi, K. (2009). Polyamine modulon in yeast- stimulation of COX4 synthesis by spermidine at the level of translation. Int J Biochem Cell Biol 41, 2538-2545.
33. Urano, K., Yoshiba, Y., Nanjo, T., Igarashi, Y., Seki, M., Sekiguchi, F., et al. (2003). Characterization of Arabidopsis genes involved in biosynthesis of polyamines in abiotic stress responses and developmental stages. Plant Cell Environ 26, 1917-1926. (Pubitemid 38024745)
34. Usadel, B., Nagel, A., Thimm., O, Redestig, H., Blaesing, O., Palacios-Rojas, N., et al. (2005). Extension of the visualization tool MapMan to allow statistical analysis of arrays, display of coresponding genes, and comparison with known responses. Plant Physiol 138, 1195-1204. (Pubitemid 43142069)
35. Watson, M.B., and Malmberg, R.L. (1996). Regulation of Arabidopsis thaliana (L.) heynh arginine decarboxylase by potassium deficiency stress. Plant Physiol 111, 1077-1083. (Pubitemid 26370007)
36. Watson, M.W., Yu, W., Galloway, G.L., and Malmberg, R.L. (1997). Isolation and characterization of a second arginine decarboxylase cDNA from Arabidopsis (Accession No. AF009647). Plant Physiol 114, 1569.
37. Yamaguchi, K., Takahashi, Y., Berberich, T., Imai, A., Miyazaki, A., Takahashi, T., et al. (2006). The polyamine spermine protects against high salt stress in Arabidopsis thaliana. FEBS Lett 580, 6783-6788. (Pubitemid 44914140)
38. Yamaguchi, K., Takahashi, Y., Berberich, T., Imai, A., Takahashi, T., Michael, A.J., et al. (2007). A protective role for the polyamine spermine against drought stress in Arabidopsis. Biochem Biophys Res Commun 352, 486-490. (Pubitemid 44841963)