메뉴 건너뛰기




Volumn 62, Issue 12, 2011, Pages 2654-2658

Major human Hepatitis A virus genotype in Hong Kong marine waters and detection by real-time PCR

Author keywords

Fecal contamination; HAV genotype IB; Hepatitis A virus; Hong Kong marine waters; TaqMan real time PCR

Indexed keywords

FECAL CONTAMINATION; HAV GENOTYPE IB; HEPATITIS A VIRUS; HONG-KONG; REAL-TIME PCR;

EID: 81855194308     PISSN: 0025326X     EISSN: 18793363     Source Type: Journal    
DOI: 10.1016/j.marpolbul.2011.09.027     Document Type: Article
Times cited : (10)

References (37)
  • 1
    • 0033848414 scopus 로고    scopus 로고
    • Rapid concentration and detection of hepatitis A virus from lettuce and strawberries
    • Bidawid S., Farber J.M., Sattar S.A. Rapid concentration and detection of hepatitis A virus from lettuce and strawberries. Journal of Virological Methods 2000, 88:175-185.
    • (2000) Journal of Virological Methods , vol.88 , pp. 175-185
    • Bidawid, S.1    Farber, J.M.2    Sattar, S.A.3
  • 4
    • 0023199904 scopus 로고
    • Complete nucleotide sequence of wild-type hepatitis A virus: comparison with different strains of hepatitis A virus and other picornaviruses
    • Cohen J.I., Ticehurst J.R., Purcell R.H., Buckler-White A., Baroudy B.M. Complete nucleotide sequence of wild-type hepatitis A virus: comparison with different strains of hepatitis A virus and other picornaviruses. Journal of Virology 1987, 61:50-59.
    • (1987) Journal of Virology , vol.61 , pp. 50-59
    • Cohen, J.I.1    Ticehurst, J.R.2    Purcell, R.H.3    Buckler-White, A.4    Baroudy, B.M.5
  • 7
    • 0028241255 scopus 로고
    • Detection of Hepatitis A virus in environmental samples by antigen-capture PCR
    • Deng M.Y., Day S.P., Cliver D.O. Detection of Hepatitis A virus in environmental samples by antigen-capture PCR. Applied and Environmental Microbiology 1994, 60:1927-1933.
    • (1994) Applied and Environmental Microbiology , vol.60 , pp. 1927-1933
    • Deng, M.Y.1    Day, S.P.2    Cliver, D.O.3
  • 8
    • 0036186080 scopus 로고    scopus 로고
    • Characterization of hepatitis A virus isolates from subgenotypes IA and IB in Rio de Janeiro, Brazil
    • de Paula V.S., Baptista M.L., Lampe E., Niel C., Gaspar A.M. Characterization of hepatitis A virus isolates from subgenotypes IA and IB in Rio de Janeiro, Brazil. Journal of Medical Virology 2002, 66:22-27.
    • (2002) Journal of Medical Virology , vol.66 , pp. 22-27
    • de Paula, V.S.1    Baptista, M.L.2    Lampe, E.3    Niel, C.4    Gaspar, A.M.5
  • 9
    • 0037291510 scopus 로고    scopus 로고
    • Mixed infection of a child care provider with hepatitis A virus isolates from subgenotypes IA and IB revealed by heteroduplex mobility assay
    • de Paula V.S., Saback F.L., Gaspar A.M., Niel C. Mixed infection of a child care provider with hepatitis A virus isolates from subgenotypes IA and IB revealed by heteroduplex mobility assay. Journal of Virological Methods 2003, 107:223-228.
    • (2003) Journal of Virological Methods , vol.107 , pp. 223-228
    • de Paula, V.S.1    Saback, F.L.2    Gaspar, A.M.3    Niel, C.4
  • 10
    • 33645849799 scopus 로고    scopus 로고
    • Intra-laboratory validation of a concentration method adapted for the enumeration of infectious F-specific RNA coliphage, enterovirus, and hepatitis A virus from inoculated leaves of salad vegetables
    • Dubois E., Hennechart C., Deboosère N., Merle G., Legeay O., Burger C., Le Calvé M., Lombard B., Ferré V., Traoré O. Intra-laboratory validation of a concentration method adapted for the enumeration of infectious F-specific RNA coliphage, enterovirus, and hepatitis A virus from inoculated leaves of salad vegetables. International Journal of Food Microbiology 2006, 25:164-171.
    • (2006) International Journal of Food Microbiology , vol.25 , pp. 164-171
    • Dubois, E.1    Hennechart, C.2    Deboosère, N.3    Merle, G.4    Legeay, O.5    Burger, C.6    Le Calvé, M.7    Lombard, B.8    Ferré, V.9    Traoré, O.10
  • 11
    • 34249083843 scopus 로고    scopus 로고
    • Detection and quantification by real-time RT-PCR of hepatitis A virus from inoculated tap waters, salad vegetables, and soft fruits: characterization of the method performances
    • Dubois E., Hennechart C., Merle G., Burger C., Hmila N., Ruelle S., Perelle S., Ferré V. Detection and quantification by real-time RT-PCR of hepatitis A virus from inoculated tap waters, salad vegetables, and soft fruits: characterization of the method performances. International Journal of Food Microbiology 2007, 117:141-149.
    • (2007) International Journal of Food Microbiology , vol.117 , pp. 141-149
    • Dubois, E.1    Hennechart, C.2    Merle, G.3    Burger, C.4    Hmila, N.5    Ruelle, S.6    Perelle, S.7    Ferré, V.8
  • 12
    • 33845412998 scopus 로고    scopus 로고
    • Analysis of the full-length genome of a subgenotype IIIB hepatitis A virus isolate: primers for broadly reactive PCR and genotypic analysis
    • Endo K., Inoue J., Takahashi M., Mitsui T., Masuko K., Akahane Y., Okamoto H. Analysis of the full-length genome of a subgenotype IIIB hepatitis A virus isolate: primers for broadly reactive PCR and genotypic analysis. Journal of Medical Virology 2007, 79:8-17.
    • (2007) Journal of Medical Virology , vol.79 , pp. 8-17
    • Endo, K.1    Inoue, J.2    Takahashi, M.3    Mitsui, T.4    Masuko, K.5    Akahane, Y.6    Okamoto, H.7
  • 13
    • 71149121136 scopus 로고    scopus 로고
    • Hepatitis A and E: update on prevention and epidemiology
    • FitzSimons D., Hendrickx G., Vorsters A., Van Damme P. Hepatitis A and E: update on prevention and epidemiology. Vaccine 2010, 28:583-588.
    • (2010) Vaccine , vol.28 , pp. 583-588
    • FitzSimons, D.1    Hendrickx, G.2    Vorsters, A.3    Van Damme, P.4
  • 14
    • 33845533008 scopus 로고    scopus 로고
    • Quantitative detection of hepatitis a virus and enteroviruses near the United States-Mexico border and correlation with levels of fecal indicator bacteria
    • Gersberg R.M., Rose M.A., Robles-Sikisaka R., Dhar A.K. Quantitative detection of hepatitis a virus and enteroviruses near the United States-Mexico border and correlation with levels of fecal indicator bacteria. Applied and Environmental Microbiology 2006, 72:7438-7444.
    • (2006) Applied and Environmental Microbiology , vol.72 , pp. 7438-7444
    • Gersberg, R.M.1    Rose, M.A.2    Robles-Sikisaka, R.3    Dhar, A.K.4
  • 15
    • 84859445585 scopus 로고    scopus 로고
    • Detection and quantitation of hepatitis A virus in shellfish by the polymerase chain reaction. Bacteriological Analytical Manual. US Food and Drug Administration (Chapter 26).
    • Goswami, B.B., 2001. Detection and quantitation of hepatitis A virus in shellfish by the polymerase chain reaction. Bacteriological Analytical Manual. US Food and Drug Administration (Chapter 26). http://www.fda.gov/Food/ScienceResearch/LaboratoryMethods/BacteriologicalAnalyticalManualBAM/UCM073657.
    • (2001)
    • Goswami, B.B.1
  • 17
    • 0025230335 scopus 로고
    • Molecular epidemiology of human hepatitis A virus defined by an antigen-capture polymerase chain reaction method
    • Jansen R.W., Siegl G., Lemon S.M. Molecular epidemiology of human hepatitis A virus defined by an antigen-capture polymerase chain reaction method. Proceedings of the National Academy of Sciences 1990, 87:2867-2871.
    • (1990) Proceedings of the National Academy of Sciences , vol.87 , pp. 2867-2871
    • Jansen, R.W.1    Siegl, G.2    Lemon, S.M.3
  • 18
    • 26044447154 scopus 로고    scopus 로고
    • Review of factors affecting microbial survival in groundwater
    • John D.E., Rose J.B. Review of factors affecting microbial survival in groundwater. Environmental Science and Technology 2005, 39:7345-7356.
    • (2005) Environmental Science and Technology , vol.39 , pp. 7345-7356
    • John, D.E.1    Rose, J.B.2
  • 19
  • 20
    • 0036196006 scopus 로고    scopus 로고
    • Development of a virus concentration method and its application to detection of enterovirus and norwalk virus from coastal seawater
    • Katayama H., Shimasaki A., Ohgaki S. Development of a virus concentration method and its application to detection of enterovirus and norwalk virus from coastal seawater. Applied and Environmental Microbiology 2002, 68:1033-1039.
    • (2002) Applied and Environmental Microbiology , vol.68 , pp. 1033-1039
    • Katayama, H.1    Shimasaki, A.2    Ohgaki, S.3
  • 21
    • 0035987733 scopus 로고    scopus 로고
    • Rapid detection of six types of bacterial pathogens in marine waters by multiplex PCR
    • Kong R.Y., Lee S.K., Law T.W., Law S.H., Wu R.S. Rapid detection of six types of bacterial pathogens in marine waters by multiplex PCR. Water Research 2002, 36:2802-2812.
    • (2002) Water Research , vol.36 , pp. 2802-2812
    • Kong, R.Y.1    Lee, S.K.2    Law, T.W.3    Law, S.H.4    Wu, R.S.5
  • 22
    • 77951245406 scopus 로고    scopus 로고
    • Identification of recombination between subgenotypes IA and IB of hepatitis A virus
    • Liu W., Zhai J., Liu J., Xie Y. Identification of recombination between subgenotypes IA and IB of hepatitis A virus. Virus Genes 2010, 40:222-224.
    • (2010) Virus Genes , vol.40 , pp. 222-224
    • Liu, W.1    Zhai, J.2    Liu, J.3    Xie, Y.4
  • 24
    • 33745726973 scopus 로고    scopus 로고
    • Distinct changing profiles of hepatitis A and E virus infection among patients with acute hepatitis, patients on maintenance hemodialysis and healthy individuals in Japan
    • Mitsui T., Tsukamoto Y., Hirose A., Suzuki S., Yamazaki C., Masuko K., Tsuda F., Endo K., Takahashi M., Okamoto H. Distinct changing profiles of hepatitis A and E virus infection among patients with acute hepatitis, patients on maintenance hemodialysis and healthy individuals in Japan. Journal of Medical Virology 2006, 78:1015-1024.
    • (2006) Journal of Medical Virology , vol.78 , pp. 1015-1024
    • Mitsui, T.1    Tsukamoto, Y.2    Hirose, A.3    Suzuki, S.4    Yamazaki, C.5    Masuko, K.6    Tsuda, F.7    Endo, K.8    Takahashi, M.9    Okamoto, H.10
  • 25
    • 0025833699 scopus 로고
    • Sequence analysis of a new hepatitis A virus naturally infecting cynomolgus macaques (Macaca fascicularis)
    • Nainan O.V., Margolis H.S., Robertson B.H., Balayan M., Brinton M.A. Sequence analysis of a new hepatitis A virus naturally infecting cynomolgus macaques (Macaca fascicularis). Journal of General Virology 1991, 72:1685-1689.
    • (1991) Journal of General Virology , vol.72 , pp. 1685-1689
    • Nainan, O.V.1    Margolis, H.S.2    Robertson, B.H.3    Balayan, M.4    Brinton, M.A.5
  • 28
    • 0031664503 scopus 로고    scopus 로고
    • Viral pollution in the environment and in shellfish: human adenovirus detection by PCR as an index of human viruses
    • Pina S., Puig M., Lucena F., Jofre J., Girones R. Viral pollution in the environment and in shellfish: human adenovirus detection by PCR as an index of human viruses. Applied and Environmental Microbiology 1998, 64:3376-3382.
    • (1998) Applied and Environmental Microbiology , vol.64 , pp. 3376-3382
    • Pina, S.1    Puig, M.2    Lucena, F.3    Jofre, J.4    Girones, R.5
  • 30
    • 0002129975 scopus 로고    scopus 로고
    • Quantification on the Light Cycler
    • Springer Press, Heidelberg, S. Meuer, C. Wittwer, K. Nakagawara (Eds.)
    • Rasmussen R. Quantification on the Light Cycler. Rapid Cycle Real-time PCR-Methods and Applications 2001, 21-34. Springer Press, Heidelberg. S. Meuer, C. Wittwer, K. Nakagawara (Eds.).
    • (2001) Rapid Cycle Real-time PCR-Methods and Applications , pp. 21-34
    • Rasmussen, R.1
  • 31
    • 33746903546 scopus 로고    scopus 로고
    • Quantitation of hepatitis A virus and enterovirus levels in the lagoon canals and Lido beach of Venice, Italy, using real-time RT-PCR
    • Rose M.A., Dhar A.K., Brooks H.A., Zecchini F., Gersberg R.M. Quantitation of hepatitis A virus and enterovirus levels in the lagoon canals and Lido beach of Venice, Italy, using real-time RT-PCR. Water Research 2006, 40:2387-2396.
    • (2006) Water Research , vol.40 , pp. 2387-2396
    • Rose, M.A.1    Dhar, A.K.2    Brooks, H.A.3    Zecchini, F.4    Gersberg, R.M.5
  • 32
    • 25144493306 scopus 로고    scopus 로고
    • Rapid and quantitative detection of hepatitis A virus from green onion and strawberry rinses by use of real-time reverse transcription-PCR
    • Shan X.C., Wolffs P., Griffiths M.W. Rapid and quantitative detection of hepatitis A virus from green onion and strawberry rinses by use of real-time reverse transcription-PCR. Applied and Environmental Microbiology 2005, 71:5624-5626.
    • (2005) Applied and Environmental Microbiology , vol.71 , pp. 5624-5626
    • Shan, X.C.1    Wolffs, P.2    Griffiths, M.W.3
  • 34
    • 26244433685 scopus 로고    scopus 로고
    • Characterization and genetic variability of hepatitis A virus genotype IIIA
    • Stene-Johansen K., Jonassen T.Ø., Skaug K. Characterization and genetic variability of hepatitis A virus genotype IIIA. Journal of General Virology 2005, 86:2739-2745.
    • (2005) Journal of General Virology , vol.86 , pp. 2739-2745
    • Stene-Johansen, K.1    Jonassen, T.Ø.2    Skaug, K.3
  • 35
    • 0030888317 scopus 로고    scopus 로고
    • Molecular epidemiology of South African strains of hepatitis A virus: 1982-1996
    • Taylor M.B. Molecular epidemiology of South African strains of hepatitis A virus: 1982-1996. Journal of Medical Virology 1997, 51:273-279.
    • (1997) Journal of Medical Virology , vol.51 , pp. 273-279
    • Taylor, M.B.1
  • 36
    • 0025783745 scopus 로고
    • Simian hepatitis A virus (HAV) strain AGM-27: comparison of genome structure and growth in cell culture with other HAV strains
    • Tsarev S.A., Emerson S.U., Balayan M.S., Ticehurst J., Purcell R.H. Simian hepatitis A virus (HAV) strain AGM-27: comparison of genome structure and growth in cell culture with other HAV strains. Journal of General Virology 1991, 72:1677-1683.
    • (1991) Journal of General Virology , vol.72 , pp. 1677-1683
    • Tsarev, S.A.1    Emerson, S.U.2    Balayan, M.S.3    Ticehurst, J.4    Purcell, R.H.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.