Photophysics of the interaction between a fluorescein derivative and ficoll

Journal of Physical Chemistry A

Volumn 115, Issue 46, 2011, Pages 13242-13250

  Paredes, Jose M ^a   Crovetto, Luis ^a   Orte, Angel ^a   Lopez, Sergio G ^a   Talavera, Eva M ^a   Alvarez Pez, Jose M ^a  

^a UNIVERSITY OF GRANADA   (Spain)

Author keywords

[No Author keywords available]

Indexed keywords

ADSORPTION COMPLEX; CORRELATION SPECTROSCOPY; EXPERIMENTAL CONDITIONS; FLUORESCENCE LIFETIMES; FLUORESCENT DYES; MIXED SIZE; PHOSPHATE IONS; PHOTOPHYSICS; SPECTRAL CHARACTERISTICS; STEADY-STATE FLUORESCENCE; TIME-RESOLVED EMISSION SPECTROSCOPY; TIME-RESOLVED FLUORESCENCE;

ADSORPTION; DIFFUSION; EMISSION SPECTROSCOPY; FLUORESCENCE; HYDROGEN; HYDROGEN BONDS;

GLUCOSE;

FICOLL; FLUORESCEIN; FLUORESCENT DYE;

ARTICLE; CHEMICAL STRUCTURE; CHEMISTRY; FLUORESCENCE; PHOTOCHEMISTRY;

FICOLL; FLUORESCEIN; FLUORESCENCE; FLUORESCENT DYES; MOLECULAR STRUCTURE; PHOTOCHEMICAL PROCESSES;

EID: 81555213034     PISSN: 10895639     EISSN: 15205215     Source Type: Journal    
DOI: 10.1021/jp204666j     Document Type: Article

References (33)

1. Minton, A. P.; Wilf, J. Effect of macromolecular crowding upon the structure and function of an enzyme: Glyceraldehyde-3-phosphate dehydrogenase Biochemistry 1981, 20, 4821-4826
2. Cheung, M. S.; Klimov, D.; Thirumalai, D. Molecular crowding enhances native state stability and refolding rates of globular proteins Proc. Natl. Acad. Sci. U. S. A. 2005, 102, 4753-4758
3. Minton, A. P. The influence of macromolecular crowding and macromolecular confinement on biochemical reactions in physiological media J. Biol. Chem. 2001, 276, 10577-10580
4. Martin, J.; Hartl, F. U. The effect of macromolecular crowding on chaperonin-mediated protein folding Proc. Natl. Acad. Sci. U. S. A. 1997, 94, 1107-1112
5. Seksek, O.; Biwersi, J.; Verkman, A. S. Translational diffusion of macromolecule-sized solutes in cytoplasm and nucleus J. Cell Biol. 1997, 138, 131-142
6. Dix, J. A.; Verkman, A. S. Crowding effects on diffusion in solutions and cells Annu. Rev. Biophys. 2008, 37, 247-263
7. Dauty, E.; Verkman, A. S. Molecular crowding reduces to a similar extent the diffusion of small solutes and macromolecules: measurement by fluorescence correlation spectroscopy J. Mol. Recognit. 2004, 17, 441-447
8. Verkman, A. S. Diffusion in cells measured by fluorescence recovery after photobleaching Methods Enzymol. 2003, 360, 635-648
9. Jin, S.; Verkman, A. S. Single particle tracking of complex diffusion in membranes: simulation and detection of barrier, raft, and interaction phenomena J. Phys. Chem. B 2007, 111, 3625-3632
10. Jares-Erijman, E. A.; Jovin, T. M. FRET imaging Nat. Biotechnol. 2003, 21, 1387-1395
11. Bacia, K.; Kim, S. A.; Schwille, P. Fluorescence cross-correlation spectroscopy in living cells Nat. Methods 2006, 3, 83-89
12. Urano, Y.; Kamiya, M.; Kanda, K.; Ueno, T.; Hirose, K.; Nagano, T. Evolution of Fluorescein as a Platform for Finely Tunable Fluorescence Probes J. Am. Chem. Soc. 2005, 127 (13) 4888-4894
13. Paredes, J. M.; Crovetto, L.; Rios, R.; Orte, A.; Alvarez-Pez, J. M.; Talavera, E. M. Tuned lifetime, at the ensemble and single molecule level, of a xanthenic fluorescent dye by means of a buffer-mediated excited-state proton exchange reaction Phys. Chem. Chem. Phys. 2009, 11 (26) 5400-5407
14. Paredes, J. M.; Orte, A.; Crovetto, L.; Alvarez-Pez, J. M.; Rios, R.; Ruedas-Rama, M. J.; Talavera, E. M. Similarity between the kinetic parameters of the buffer-mediated proton exchange reaction of a xanthenic derivative in its ground- and excited-state Phys. Chem. Chem. Phys. 2010, 12, 323-327
15. Paredes, J. M.; Crovetto, L.; Orte, A.; Alvarez-Pez, J. M.; Talavera, E. M. Influence of the solvent on the ground- and excited-state buffer-mediated proton-transfer reactions of a xanthenic dye Phys. Chem. Chem. Phys. 2011, 13 (4) 1685-1694
16. Böhmer, M.; Wahl, M.; Rahn, H. J.; Erdmann, R.; Enderlein, J. Time-resolved fluorescence correlation spectroscopy Chem. Phys. Lett. 2002, 353, 439-445
17. Benda, A.; Fagul'ová, V.; Deyneka, A.; Enderlein, J.; Hof, M. Fluorescence Lifetime Correlation Spectroscopy Combined with Lifetime Tuning: New Perspectives in Supported Phospholipid Bilayer Research Langmuir 2006, 22 (23) 9580-9585
18. Kapusta, P.; Wahl, M.; Benda, A.; Hof, M.; Enderlein, J. Fluorescence Lifetime Correlation Spectroscopy J. Fluoresc. 2007, 17, 43-48
19. Gregor, I.; Enderlein, J. Time-resolved methods in biophysiscs.3. Fluorescence lifetime correlation spectroscopy Photochem. Photobiol. Sci. 2007, 6, 13-18
20. Ray, K.; Zhang, J.; Lakowicz, J. R. Fluorescence Lifetime Correlation Spectroscopic Study of Fluorophore-Labeled Silver Nanoparticles Anal. Chem. 2008, 80 (19) 7313-7318
21. Chen, J.; Irudayaraj, J. Fluorescence Lifetime Cross Correlation Spectroscopy Resolves EGFR and Antagonist Interaction in Live Cells Anal. Chem. 2010, 82 (15) 6415-6421
22. Rüttinger, S.; Kapusta, P.; Patting, M.; Wahl, M.; Macdonald, R. On the Resolution Capabilities and Limits of Fluorescence Lifetime Correlation Spectroscopy (FLCS) Measurements J. Fluoresc. 2010, 20 (1) 105-114
23. Ohlson, M.; Sörensson, J.; Haraldsson, B. Glomerular size and charge selectivity in the rat as revealed by FITC-Ficoll and albumin Am. J. Physiol. Renal Physiol. 2000, 279, F84-F91
24. Wahl, M.; Erdmann, R.; Lauritsen, K.; Rahn, H. J. Hardware solution for continuous time-resolved burst detection of single molecules in flow Proc. SPIE 1998, 3259, 173-178
25. Maus, M.; Cotlet, M.; Hofkens, J.; Gensch, T.; De Schryver, F. C.; Schafer, J.; Seidel, C. A. M. An experimental comparison of the maximum likehood estimation and nonlinear least-squares fluorescence lifetime analysis of single molecules Anal. Chem. 2001, 73, 2078-2086
26. Edel, J. B.; Eid, J. S.; Meller, A. Accurate Single Molecule FRET Efficiency Determination for Surface Immobilized DNA Using Maximum Likelihood Calculated Lifetimes J. Phys. Chem. B 2007, 111 (11) 2986-2990
27. Mandal, A. K.; Pal, M. K. Principal component analysis of the absorption spectra of the dye thiacyanine in the presence of the surfactant AOT: Precise Identification of the Dye-Surfactant Aggregates J. Colloid Interface Sci. 1997, 192, 83-93
28. Al-Soufi, W.; Novo, M.; Mosquera, M. Principal component global analysis of fluorescence and absorption spectra of 2-(2′-Hydroxyphenyl) benzimidazole Appl. Spectrosc. 2001, 55, 630-636
29. Ruedas-Rama, M. J.; Alvarez-Pez, J. M.; Orte, A. Formation of stable BOBO-3 H-aggregate complexes hinders DNA hybridization J. Phys. Chem. B 2010, 114, 9063-9071
30. Valeur, B. Principles of steady-state and time-resolved fluorometric techniques in Molecular fluorescence: Principles and applications. Wiley-VCH Verlag Gmbh: Weingheim (Germany), 2001, pp 155-199.
31. Haustein, E.; Schwille, P. Fluorescence Correlation Spectroscopy: Novel Variations of an Established Technique Annu. Rev. Biophys. Biomol. Struct. 2007, 36, 151-169
32. Lavrenko, P. N.; Mikriukova, O. I.; Okatova, O. V. On the separation ability of various Ficoll gradient solutions in zonal centrifugation Anal. Biochem. 1987, 166, 287-297
33. Alvarez-Pez, J. M.; Ballesteros, L.; Talavera, E. M.; Yguerabide, J. Fluorescein Excited State Proton Exchange Reactions: Nanosecond Emission Kinetics and Correlation with Steady State Fluorescence Intensity J. Phys. Chem. A 2001, 105, 6320-6332