Adaptation of the CHARM DNA methylation platform for the rat genome reveals novel brain region-specific differences

Epigenetics

Volumn 6, Issue 11, 2011, Pages 1378-1390

  Lee, Richard S ^a   Tamashiro, Kellie L K ^a   Aryee, Martin J ^b,d   Murakami, Peter ^b,d   Seifuddin, Fayaz ^b,c   Herb, Brian ^a   Huo, Yuqing ^a   Rongione, Michael ^b,c   Feinberg, Andrew P ^a   Moran, Timothy H ^a   Potash, James B ^b,c,e  

^a JOHNS HOPKINS UNIVERSITY   (United States)

^b JOHNS HOPKINS UNIVERSITY   (United States)

^c JOHNS HOPKINS UNIVERSITY SCHOOL OF MEDICINE   (United States)

^d JOHNS HOPKINS BLOOMBERG SCHOOL OF PUBLIC HEALTH   (United States)

^e UNIVERSITY OF IOWA HOSPITALS AND CLINICS   (United States)

Author keywords

Brain; DNA methylation; Epigenetics; Genome wide; Methylation array; Rat

Indexed keywords

BISULFITE; BRAIN DERIVED NEUROTROPHIC FACTOR RECEPTOR; CPG OLIGODEOXYNUCLEOTIDE; GENOMIC DNA; NEUROGENIN 2; NUCLEAR PROTEIN; NUCLEAR RECEPTOR RELATED FACTOR 1; TCF4 PROTEIN; TCFAP2C PROTEIN; TRANSCRIPTION FACTOR EMX2; UNCLASSIFIED DRUG;

ADAPTATION; ANIMAL EXPERIMENT; ANIMAL TISSUE; ARTICLE; BRAIN CORTEX; BRAIN REGION; CLUSTER ANALYSIS; COMPARATIVE GENOMIC HYBRIDIZATION; COMPREHENSIVE HIGH THROUGHPUT ARRAYS FOR RELATIVE METHYLATION; CPG ISLAND; DIFFERENTIALLY METHYLATED REGION; DNA EXTRACTION; DNA METHYLATION; EPIGENETICS; GENE LOCATION; GENETIC ASSOCIATION; HIPPOCAMPUS; HYPOTHALAMUS; LIVER; MALE; NONHUMAN; PROMOTER REGION; PYROSEQUENCING; RAT; SPLEEN;

RATTUS;

EID: 81055136656     PISSN: 15592294     EISSN: 15592308     Source Type: Journal    
DOI: 10.4161/epi.6.11.18072     Document Type: Article

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