The proteomic signature of Aspergillus fumigatus during early development

Molecular and Cellular Proteomics

Volumn 10, Issue 11, 2011, Pages

  Cagas, Steven E ^a   Jain, Mohit Raja ^b   Li, Hong ^b   Perlin, David S ^a  

^a PUBLIC HEALTH RESEARCH INSTITUTE   (United States)

^b The State University of New Jersey   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

FUNGAL PROTEIN; PROTEOME; BIOLOGICAL MARKER;

ARTICLE; ASPERGILLUS FUMIGATUS; CONIDIUM; DOWN REGULATION; FUNGAL DEVELOPMENT; FUNGAL GENOME; FUNGAL MORPHOLOGY; FUNGUS GROWTH; FUNGUS SPORE; GENE EXPRESSION REGULATION; MICROARRAY ANALYSIS; MOLECULAR WEIGHT; OPEN READING FRAME; PRIORITY JOURNAL; PROTEOMICS; UPREGULATION; ASPERGILLOSIS; DNA MICROARRAY; DRUG DESIGN; GENE EXPRESSION PROFILING; GENETICS; GROWTH, DEVELOPMENT AND AGING; METABOLISM; MICROBIOLOGY; MYCELIUM;

ASPERGILLUS FUMIGATUS; FUNGI;

ASPERGILLOSIS; ASPERGILLUS FUMIGATUS; BIOLOGICAL MARKERS; DRUG DESIGN; FUNGAL PROTEINS; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION, FUNGAL; GENOME, FUNGAL; MYCELIUM; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; PROTEOME;

EID: 80555146688     PISSN: 15359476     EISSN: 15359484     Source Type: Journal    
DOI: 10.1074/mcp.M111.010108     Document Type: Article

References (32)

1. Latgé, J. P. (1999) Aspergillus fumigatus and aspergillosis. Clin. Microbiol. Rev. 12, 310-350
2. Denning, D. W. (1998) Invasive aspergillosis. Clin. Infect. Dis. 26, 781-803; quiz 804-785
3. Marr, K. A., Patterson, T., and Denning, D. (2002) Aspergillosis. Pathogenesis, clinical manifestations, and therapy. Infect. Dis. Clin. North Am. 16, 875-894, vi (Pubitemid 35477517)
4. Feldmesser, M. (2006) Role of neutrophils in invasive aspergillosis. Infect. Immun. 74, 6514-6516
5. Segal, B. H. (2009) Aspergillosis. N. Engl. J. Med. 360, 1870-1884
6. Barhoom, S., and Sharon, A. (2004) cAMP regulation of "pathogenic" and "saprophytic" fungal spore germination. Fungal Genet. Biol. 41, 317-326 (Pubitemid 38169451)
7. Harris, S. D., and Momany, M. (2004) Polarity in filamentous fungi: moving beyond the yeast paradigm. Fungal Genet. Biol. 41, 391-400 (Pubitemid 38283828)
8. Lamarre, C., Sokol, S., Debeaupuis, J. P., Henry, C., Lacroix, C., Glaser, P., Coppée, J. Y., Francois, J. M., and Latgé, J. P. (2008) Transcriptomic analysis of the exit from dormancy of Aspergillus fumigatus conidia. BMC Genomics 9, 417
9. Asif, A. R., Oellerich, M., Amstrong, V. W., Riemenschneider, B., Monod, M., and Reichard, U. (2006) Proteome of conidial surface associated proteins of Aspergillus fumigatus reflecting potential vaccine candidates and allergens. J. Proteome Res. 5, 954-962
10. Chai, L. Y., Netea, M. G., Sugui, J., Vonk, A. G., van de Sande, W. W., Warris, A., Kwon-Chung, K. J., and Jan Kullberg, B. (2009) Aspergillus fumigatus Conidial Melanin Modulates Host Cytokine Response. Immunobiology 215, 915-920
11. Pihet, M., Vandeputte, P., Tronchin, G., Renier, G., Saulnier, P., Georgeault, S., Mallet, R., Chabasse, D., Symoens, F., and Bouchara, J. P. (2009) Melanin is an essential component for the integrity of the cell wall of Aspergillus fumigatus conidia. BMC Microbiol. 24, 177
12. Youngchim, S., Morris-Jones, R., Hay, R. J., and Hamilton, A. J. (2004) Production of melanin by Aspergillus fumigatus. J. Med. Microbiol. 53, 175-181 (Pubitemid 38340115)
13. Aimanianda, V., Bayry, J., Bozza, S., Kniemeyer, O., Perruccio, K., Elluru, S. R., Clavaud, C., Paris, S., Brakhage, A. A., Kaveri, S. V. Romani, L., Latgé, J. P. (2009) Surface hydrophobin prevents immune recognition of airborne fungal spores. Nature 460, 1117-1121
14. Paris, S., Debeaupuis, J. P., Crameri, R., Carey, M., Charlès, F., Prévost, M. C., Schmitt, C., Philippe, B., and Latgé, J. P. (2003) Conidial hydrophobins of Aspergillus fumigatus. Appl. Environ. Microbiol. 69, 1581-1588 (Pubitemid 36314298)
15. Thau, N., Monod, M., Crestani, B., Rolland, C., Tronchin, G., Latgé, J. P., and Paris, S. (1994) Rodletless mutants of Aspergillus fumigatus. Infect. Immun. 62, 4380-4388 (Pubitemid 24301967)
16. Gautam, P., Sundaram, C. S., Madan, T., Gade, W. N., Shah, A., Sirdeshmukh, R., and Sarma, P. U. (2007) Identification of novel allergens of Aspergillus fumigatus using immunoproteomics approach. Clin. Exp. Allergy 37, 1239-1249 (Pubitemid 47076348)
17. Gravelat, F. N., Doedt, T., Chiang, L. Y., Liu, H., Filler, S. G., Patterson, T. F., and Sheppard, D. C. (2008) In vivo analysis of Aspergillus fumigatus developmental gene expression determined by real-time reverse transcription-PCR. Infect. Immun. 76, 3632-3639
18. Teutschbein, J., Albrecht, D., Pötsch, M., Guthke, R., Aimanianda, V., Clavaud, C., Latgé, J. P., Brakhage, A. A., and Kniemeyer, O. (2010) Proteome profiling and functional classification of intracellular proteins from conidia of the human-pathogenic mold Aspergillus fumigatus. J. Proteome Res. 9, 3427-3442
19. Beranova-Giorgianni, S. (2003) Proteome analysis by two-dimensional gel electrophoresis and mass spectrometry: strengths and limitations. Trac-Trend Anal. Chem. 22, 273-281
20. Ross, P. L., Huang, Y. N., Marchese, J. N., Williamson, B., Parker, K., Hattan, S., Khainovski, N., Pillai, S., Dey, S., Daniels, S., Purkayastha, S., Juhasz, P., Martin, S., Bartlet-Jones, M., He, F., Jacobson, A., Pappin, D. J. (2004) Multiplexed protein quantitation in Saccharomyces cerevisiae using amine-reactive isobaric tagging reagents. Mol. Cell. Proteomics 3, 1154-1169
21. Zieske, L. R. (2006) A perspective on the use of iTRAQ reagent technology for protein complex and profiling studies. J. Exp. Bot. 57, 1501-1508
22. Cagas, S. E., Jain, M. R., Li, H., and Perlin, D. S. (2011) Profiling the Aspergillus fumigatus proteome in response to caspofungin. Antimicrob. Agents Chemother. 55, 146-154
23. Niki, Y., Bernard, E. M., Edwards, F. F., Schmitt, H. J., Yu, B., and Armstrong, D. (1991) Model of recurrent pulmonary aspergillosis in rats. J. Clin. Microbiol. 29, 1317-1322
24. Saeed, A. I., Sharov, V., White, J., Li, J., Liang, W., Bhagabati, N., Braisted, J., Klapa, M., Currier, T., Thiagarajan, M.,Sturn, A., Snuffin, M., Rezantsev, A., Popov, D., Ryltsov, A., Kostukovich, E., Borisovsky, I., Liu, Z., Vinsavich, A., Trush, V., Quackenbush, J. (2003) TM4: a free, opensource system for microarray data management and analysis. Biotechniques 34, 374-378 (Pubitemid 36184095)
25. Hosack, D. A., Dennis, G., Jr., Sherman, B. T., Lane, H. C., and Lempicki, R. A. (2003) Identifying biological themes within lists of genes with EASE. Genome Biol. 4, R70
26. McDonagh, A., Fedorova, N. D., Crabtree, J., Yu, Y., Kim, S., Chen, D., Loss, O., Cairns, T., Goldman, G., Armstrong-James, D., Haynes, K., Haas, H., Schrettl, M., May, G., Nierman, W. C., Bignell, E. (2008) Sub-telomere directed gene expression during initiation of invasive aspergillosis. PLoS Pathog. 4, e1000154
27. Jain, M. R., Bian, S., Liu, T., Hu, J., Elkabes, S., and Li, H. (2009) Altered proteolytic events in experimental autoimmune encephalomyelitis discovered by iTRAQ shotgun proteomics analysis of spinal cord. Proteome Sci. 7, 25
28. Keller, A., Nesvizhskii, A. I., Kolker, E., and Aebersold, R. (2002) Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search. Anal. Chem. 74, 5383-5392 (Pubitemid 35215372)
29. Käll, L., Storey, J. D., MacCoss, M. J., and Noble, W. S. (2008) Assigning significance to peptides identified by tandem mass spectrometry using decoy databases. J. Proteome Res. 7, 29-34 (Pubitemid 351171110)
30. Nesvizhskii, A. I., Keller, A., Kolker, E., and Aebersold, R. (2003) A statistical model for identifying proteins by tandem mass spectrometry. Anal. Chem. 75, 4646-4658 (Pubitemid 37082259)
31. Taubitz, A., Bauer, B., Heesemann, J., and Ebel, F. (2007) Role of respiration in the germination process of the pathogenic mold Aspergillus fumigatus. Curr. Microbiol. 54, 354-360 (Pubitemid 46733869)
32. Woo, P. C., Chong, K. T., Lau, C. C., Wong, S. S., Lau, S. K., and Yuen, K. Y. (2006) A novel approach for screening immunogenic proteins in Penicillium marneffei using the DeltaAFMP1DeltaAFMP2 deletion mutant of Aspergillus fumigatus. FEMS Microbiol. Lett. 262, 138-147 (Pubitemid 44272788)