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Volumn 93, Issue 1-2, 2011, Pages 29-46

Cryptic diversity within the genus Pseudomuriella hanagata (Chlorophyta, Chlorophyceae, Sphaeropleales) assessed using four barcode markers

Author keywords

Barcoding; Coccoid; Cox1; Cryptic species; ITS; RbcL; TufA

Indexed keywords

ALGAE; CHLOROPHYCEAE; CHLOROPHYTA; COCCOIDEA; PSEUDOMURIELLA; SPHAEROPLEALES;

EID: 80455149758     PISSN: 00295035     EISSN: None     Source Type: Journal    
DOI: 10.1127/0029-5035/2011/0093-0029     Document Type: Article
Times cited : (21)

References (44)
  • 1
    • 0025025422 scopus 로고
    • Different fates of the chloroplast tufa gene following transfer to the nucleus in green algae
    • BALDAUF, S.L, J.R. MANHART & J.D. PALMER (1990): Different fates of the chloroplast tufa gene following transfer to the nucleus in green algae. - PNAS 87: 5317-5321.
    • (1990) PNAS , vol.87 , pp. 5317-5321
    • Baldauf, S.L.1    Manhart, J.R.2    Palmer, J.D.3
  • 2
    • 0001075277 scopus 로고
    • Phycological Studies IV. Some soil algae from Enchanted Rock and related algal species
    • BISCHOFF, H.W. & H.C. BOLD (1963): Phycological Studies IV. Some soil algae from Enchanted Rock and related algal species. - Univ. Texas Publ. 6318: 1-95.
    • (1963) Univ. Texas Publ. , vol.6318 , pp. 1-95
    • Bischoff, H.W.1    Bold, H.C.2
  • 3
    • 79956367360 scopus 로고    scopus 로고
    • Two new Dictyosphaerium-morphotype lineages of the Chlorellaceae (Trebouxiophyceae): Heynigia gen. nov. and Hindakia gen. nov
    • BOCK, C., T. PRÖSCHOLD & L. KRIENITZ (2010): Two new Dictyosphaerium-morphotype lineages of the Chlorellaceae (Trebouxiophyceae): Heynigia gen. nov. and Hindakia gen. nov. - Eur. J. Phycol. 45: 267-277.
    • (2010) Eur. J. Phycol. , vol.45 , pp. 267-277
    • Bock, C.1    Pröschold, T.2    Krienitz, L.3
  • 4
    • 0000229930 scopus 로고
    • The morphology of Chlamydomonas chlamydogama sp. nov
    • BOLD, H.C. (1949): The morphology of Chlamydomonas chlamydogama sp. nov. - Bull. Torr. Bot, Club 76: 101-8.
    • (1949) Bull. Torr. Bot, Club. , vol.76 , pp. 101-108
    • Bold, H.C.1
  • 5
    • 0037677692 scopus 로고    scopus 로고
    • ITS2 is a double-edged tool for eukaryote evolutionary comparisons
    • COLEMAN, A.W. (2003): ITS2 is a double-edged tool for eukaryote evolutionary comparisons. -TIG 19: 370-375.
    • (2003) TIG , vol.19 , pp. 370-375
    • Coleman, A.W.1
  • 6
    • 68649112185 scopus 로고
    • Syllabus der Boden-, Luft- und Flechtenalgen
    • Stuttgart
    • ETTL, H. & G. GÄRTNER (1995): Syllabus der Boden-, Luft- und Flechtenalgen. - Gustav Fischer Verlag. Stuttgart.
    • (1995) Gustav Fischer Verlag
    • Ettl, H.1    Gärtner, G.2
  • 7
    • 0036806072 scopus 로고    scopus 로고
    • Molecular phylogeny of the genus Caulerpa (Caulerpales, Chlorophyta) inferred from chloroplast tufA gene
    • FAMA, P., B. WYSOR, W.H.C.F. KOOISTRA & G.C. ZUCCARELLO (2002): Molecular phylogeny of the genus Caulerpa (Caulerpales, Chlorophyta) inferred from chloroplast tufA gene. - J. Phycol. 38: 1040-1050.
    • (2002) J. Phycol. , vol.38 , pp. 1040-1050
    • Fama, P.1    Wysor, B.2    Kooistra, W.H.C.F.3    Zuccarello, G.C.4
  • 8
    • 79951848560 scopus 로고    scopus 로고
    • Taxonomy of Desmodesmus serratus (Chlorophyceae, Chlorophyta) and related taxa on the basis of morphological and DNA sequence data
    • FAWLEY, M.W., K.P. FAWLEY & E. HEGEWALD (2011): Taxonomy of Desmodesmus serratus (Chlorophyceae, Chlorophyta) and related taxa on the basis of morphological and DNA sequence data. - Phycologia 50: 23-56.
    • (2011) Phycologia , vol.50 , pp. 23-56
    • Fawley, M.W.1    Fawley, K.P.2    Hegewald, E.3
  • 10
    • 0028341133 scopus 로고
    • A gene phylogeny of the red algae (Rhodophyta) based on plastid rbcL
    • FRESHWATER, D.W., S. FREDERICQ, B.S. BUTLER, M.H. HOMMERSAND & M.W. CHASE (1994): A gene phylogeny of the red algae (Rhodophyta) based on plastid rbcL. - PNAS 91: 7281-7285.
    • (1994) PNAS , vol.91 , pp. 7281-7285
    • Freshwater, D.W.1    Fredericq, S.2    Butler, B.S.3    Hommersand, M.H.4    Chase, M.W.5
  • 12
    • 0032434985 scopus 로고    scopus 로고
    • Phylogeny of the Subfamily Scotiellocystoideae (Chlorophyceae) and Related Taxa Inferred from 18S Ribosomal RNA Gene Sequence Data
    • HANAGATA, N. (1998): Phylogeny of the Subfamily Scotiellocystoideae (Chlorophyceae) and Related Taxa Inferred from 18S Ribosomal RNA Gene Sequence Data. - J. Phycol. 34: 1049-1054.
    • (1998) J. Phycol. , vol.34 , pp. 1049-1054
    • Hanagata, N.1
  • 14
    • 0042531561 scopus 로고    scopus 로고
    • Barcoding animal life: Cytochrome c oxidase subunit 1 divergences among closely related species
    • HEBERT, P.D.N., S. RATNASINGHAM & J.R. DEWAARD (2003b): Barcoding animal life: cytochrome c oxidase subunit 1 divergences among closely related species. - Proc. R. Soc. B. 270: S96-S99.
    • (2003) Proc. R. Soc. B , vol.270
    • Hebert, P.D.N.1    Ratnasingham, S.2    Dewaard, J.R.3
  • 16
    • 0034849408 scopus 로고    scopus 로고
    • MRBAYES: Bayesian inference of phylogeny
    • HUELSENBECK, J.P. & F. RONQUIST (2001): MRBAYES: Bayesian inference of phylogeny. - Bioinformatics 17: 754-755.
    • (2001) Bioinformatics , vol.17 , pp. 754-755
    • Huelsenbeck, J.P.1    Ronquist, F.2
  • 17
    • 0000160544 scopus 로고
    • Taxonomy of the subfamily Scotiellocystoideae Fott 1976 (Chlorellaceae, Chlorophyceae)
    • Algolog. Stud
    • KALINA, T. & M. PUNČOCHÁŘOVÁ (1987): Taxonomy of the subfamily Scotiellocystoideae Fott 1976 (Chlorellaceae, Chlorophyceae). - Arch. Hydrobiol. Suppl. 73, Algolog. Stud. 45: 473-521.
    • (1987) Arch. Hydrobiol. , vol.45 , Issue.SUPPL. 73 , pp. 473-521
    • Kalina, T.1    Punčochářová, M.2
  • 20
    • 79960423277 scopus 로고
    • Quelques algues nouvelles des sols et de la neige du Parc National Suisse, Engadine
    • KOL, E. & F. CHODAT (1934): Quelques algues nouvelles des sols et de la neige du Parc National Suisse, Engadine. - Bulletin de la Société botanique de Geneve. 25: 250-263.
    • (1934) Bulletin De La Société Botanique De Geneve , vol.25 , pp. 250-263
    • Kol, E.1    Chodat, F.2
  • 21
    • 79951847935 scopus 로고    scopus 로고
    • Taxonomic reassessment of the genus Mychonastes (Chlorophyceae, Chlorophyta) including the description of eight new species
    • KRIENITZ, L., C. BOCK, P.K. DADHEECH & T. PRÖSCHOLD (2011): Taxonomic reassessment of the genus Mychonastes (Chlorophyceae, Chlorophyta) including the description of eight new species. - Phycologia 50: 89-106.
    • (2011) Phycologia , vol.50 , pp. 89-106
    • Krienitz, L.1    Bock, C.2    Dadheech, P.K.3    Pröschold, T.4
  • 22
    • 0030955664 scopus 로고    scopus 로고
    • Diversity and phylogenetic placement of Bracteacoccus Tereg (Chlorophyceae, Chlorophyta) based on 18S ribosomal RNA gene sequence data
    • LEWIS, L.A. (1997): Diversity and phylogenetic placement of Bracteacoccus Tereg (Chlorophyceae, Chlorophyta) based on 18S ribosomal RNA gene sequence data. - J. Phycol. 33: 279-285.
    • (1997) J. Phycol. , vol.33 , pp. 279-285
    • Lewis, L.A.1
  • 23
    • 17644368841 scopus 로고    scopus 로고
    • Green algae and the origin of land plants
    • LEWIS, L.A. & R.M. MCCOURT (2004): Green algae and the origin of land plants. - Am. J. Bot. 91: 1535-1556.
    • (2004) Am. J. Bot. , vol.91 , pp. 1535-1556
    • Lewis, L.A.1    Mccourt, R.M.2
  • 24
    • 69849096954 scopus 로고    scopus 로고
    • Elliptochloris marina sp. nov. (Trebouxiophyceae, Chlorophyta), symbiotic green alga of the temperate Pacific sea anemones Anthopleura xanthogrammica and A. elegantissima (Anthozoa, Cnidaria)
    • LETSCH, M.R., G. MULLER-PARKER, T. FRIEDL & L.A. LEWIS (2009): Elliptochloris marina sp. nov. (Trebouxiophyceae, Chlorophyta), symbiotic green alga of the temperate Pacific sea anemones Anthopleura xanthogrammica and A. elegantissima (Anthozoa, Cnidaria). Journal of Phycology 45: 1127-1135.
    • (2009) Journal of Phycology , vol.45 , pp. 1127-1135
    • Letsch, M.R.1    Muller-Parker, G.2    Friedl, T.3    Lewis, L.A.4
  • 25
    • 79951747448 scopus 로고    scopus 로고
    • Molecular phylogenetic relationships in the freshwater family Hydrodictyaceae (Sphaeropleales, Chlorophyceae), with emphasis on Pediastrum duplex
    • MCMANUS, H.A. & L.A. LEWIS (2011). Molecular phylogenetic relationships in the freshwater family Hydrodictyaceae (Sphaeropleales, Chlorophyceae), with emphasis on Pediastrum duplex. - Journal of Phycology 47: 152-163.
    • (2011) Journal of Phycology , vol.47 , pp. 152-163
    • Mcmanus, H.A.1    Lewis, L.A.2
  • 26
    • 8844224149 scopus 로고    scopus 로고
    • DNA barcoding: Promise and pitfalls
    • MORITZ, C. & C. CICERO (2004): DNA barcoding: Promise and pitfalls. - PLoS Biol. 2: 1529-1531.
    • (2004) PLoS Biol , vol.2 , pp. 1529-1531
    • Moritz, C.1    Cicero, C.2
  • 28
    • 69249087360 scopus 로고    scopus 로고
    • Kalinella bambusicola gen. et sp. nov. (Trebouxiophyceae, Chlorophyta), a novel coccoid Chlorella-like subaerial alga from Southeast Asia
    • NEUSTUPA, J., Y. NĚMCOVÁ, M. ELIÁŠ & P. ŠKALOUD (2009): Kalinella bambusicola gen. et sp. nov. (Trebouxiophyceae, Chlorophyta), a novel coccoid Chlorella-like subaerial alga from Southeast Asia. Phycol. Res. 57: 159-169.
    • (2009) Phycol. Res. , vol.57 , pp. 159-169
    • Neustupa, J.1    Němcová, Y.2    Eliáš, M.3    Škaloud, P.4
  • 29
    • 0031773680 scopus 로고    scopus 로고
    • Modeltest: Testing the model of DNA substitution
    • POSADA, D. & K.A. CRANDALL (1998): Modeltest: testing the model of DNA substitution. - Bioinformatics 14: 817-818.
    • (1998) Bioinformatics , vol.14 , pp. 817-818
    • Posada, D.1    Crandall, K.A.2
  • 31
    • 34547586256 scopus 로고    scopus 로고
    • Molecular Phylogeny of the Green Algal Order Prasiolales (Trebouxiophyceae, Chlorophyta
    • RINDI, F., L. MCIVOR, A.R. SHERWOOD, T. FRIEDL, M.D. GUIRY, & R.G. SHEATH (2007): Molecular Phylogeny of the Green Algal Order Prasiolales (Trebouxiophyceae, Chlorophyta). - J. Phycol. 43: 811-822.
    • (2007) J. Phycol. , vol.43 , pp. 811-822
    • Rindi, F.1    Mcivor, L.2    Sherwood, A.R.3    Friedl, T.4    Guiry, M.D.5    Sheath, R.G.6
  • 32
    • 0041386108 scopus 로고    scopus 로고
    • MRBAYES 3: Bayesian phylogenetic inference under mixed models
    • RONQUIST, F. & J.P. HUELSENBECK (2003): MRBAYES 3: Bayesian phylogenetic inference under mixed models. - Bioinformatics 19: 1572-1574.
    • (2003) Bioinformatics , vol.19 , pp. 1572-1574
    • Ronquist, F.1    Huelsenbeck, J.P.2
  • 33
    • 33645782783 scopus 로고    scopus 로고
    • Applying DNA barcoding to red macroalgae: A preliminary appraisal holds promise for future applications
    • SAUNDERS, G.W. (2005): Applying DNA barcoding to red macroalgae: a preliminary appraisal holds promise for future applications. - Phil. Trans. R. Soc. B 360: 1879-1888.
    • (2005) Phil. Trans. R. Soc. B , vol.360 , pp. 1879-1888
    • Saunders, G.W.1
  • 34
    • 58049121167 scopus 로고    scopus 로고
    • Synchronous visual analysis and editing of RNA sequence and secondary structure alignments using 4SALE
    • SEIBEL, P.N., T. MÜLLER, T. DANDEKAR & M. WOLF (2008): Synchronous visual analysis and editing of RNA sequence and secondary structure alignments using 4SALE. - BMC Research Notes 1: 91.
    • (2008) BMC Research Notes , vol.1 , pp. 91
    • Seibel, P.N.1    Müller, T.2    Dandekar, T.3    Wolf, M.4
  • 35
    • 0041563979 scopus 로고    scopus 로고
    • Polyphyletic origin of parallel basal bodies in swimming cells of chlorophycean green algae (Chlorophyta
    • SHOUP, S. & L.A. LEWIS (2003): Polyphyletic origin of parallel basal bodies in swimming cells of chlorophycean green algae (Chlorophyta). - J. Phycol. 39: 789-796.
    • (2003) J. Phycol. , vol.39 , pp. 789-796
    • Shoup, S.1    Lewis, L.A.2
  • 36
    • 70649111214 scopus 로고    scopus 로고
    • Evolutionary inferences based on ITS rDNA and actin sequences reveal extensive diversity of the common lichen alga Asterochloris (Trebouxiophyceae, Chlorophyta
    • ŠKALOUD, P. & O. PEKSA (2010): Evolutionary inferences based on ITS rDNA and actin sequences reveal extensive diversity of the common lichen alga Asterochloris (Trebouxiophyceae, Chlorophyta). - Mol. Phylogenet. Evol. 54: 36-46.
    • (2010) Mol. Phylogenet. Evol. , vol.54 , pp. 36-46
    • Škaloud, P.1    Peksa, O.2
  • 39
    • 61449115678 scopus 로고
    • Über heterokonten und heterokontenähnliche Grünalgen (Bumilleriopsis, Heterothrix, Heterococcus, Dictyococcus, Muriella
    • VISCHER, W. (1936): Über heterokonten und heterokontenähnliche Grünalgen (Bumilleriopsis, Heterothrix, Heterococcus, Dictyococcus, Muriella). - Ber. Schweiz. Bot. Ges. 45: 372-410.
    • (1936) Ber. Schweiz. Bot. Ges. , vol.45 , pp. 372-410
    • Vischer, W.1
  • 40
    • 0000432452 scopus 로고
    • Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics
    • eds. INNIS, M.A., D.H. GELFAND, J.J. SNINSKY & T.J. WHITE. - Academic Press, Inc., New York
    • WHITE, T.J., T. BRUNS, S. LEE & J.W. TAYLOR (1990): Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. Pp. 315-322 In: PCR Protocols: A Guide to Methods and Applications, eds. INNIS, M.A., D.H. GELFAND, J.J. SNINSKY & T.J. WHITE. - Academic Press, Inc., New York.
    • (1990) PCR Protocols: A Guide to Methods and Applications , pp. 315-322
    • White, T.J.1    Bruns, T.2    Lee, S.3    Taylor, J.W.4
  • 41
    • 34047126999 scopus 로고    scopus 로고
    • Does the DNA barcoding gap exist? - a case study in blue butterflies (Lepidoptera: Lycaenidae
    • WIEMERS, M. & K. FIEDLER (2007): Does the DNA barcoding gap exist? - a case study in blue butterflies (Lepidoptera: Lycaenidae). - Front. Zool. 4: 8.
    • (2007) Front. Zool. , vol.4 , pp. 8
    • Wiemers, M.1    Fiedler, K.2


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