Misannotations of rRNA can now generate 90 false positive protein matches in metatranscriptomic studies

Nucleic Acids Research

Volumn 39, Issue 20, 2011, Pages 8792-8802

  Tripp, H James ^a   Hewson, Ian ^b   Boyarsky, Sam ^a   Stuart, Joshua M ^a   Zehr, Jonathan P ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b Department of Obstetrics Gynecology   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

MEMBRANE PROTEIN; PROTEIN PFAM; RIBOSOME RNA; UNCLASSIFIED DRUG;

ALPHAPROTEOBACTERIA; AMINO ACID SEQUENCE; ARTICLE; CANDIDATUS PELAGIBACTER; CONTROLLED STUDY; ESCHERICHIA COLI; GENE LOCUS; GENETIC ANALYSIS; GENETIC TRANSCRIPTION; METATRANSCRIPTOMICS; MOLECULAR GENETICS; NONHUMAN; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; OPERON; PRIORITY JOURNAL; PROTEIN DATABASE; PROTEIN DOMAIN; PYROSEQUENCING; QUALITY CONTROL; SACCHAROMYCES CEREVISIAE; SEQUENCE ANALYSIS; SEQUENCE HOMOLOGY; TRANSCRIPTOMICS;

ALPHAPROTEOBACTERIA; ARCHAEA; BACTERIA; DATABASES, NUCLEIC ACID; GENES, RRNA; HYDROLASES; METAGENOMICS; MOLECULAR SEQUENCE ANNOTATION; OPERON; PSEUDOGENES; RNA, ANTISENSE; SEQUENCE ANALYSIS, DNA; TRANSCRIPTOME;

EID: 80455129664     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gkr576     Document Type: Article

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