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Volumn 159, Issue 3, 2011, Pages 428-441

Genetic diversity and differentiation of lotus (Nelumbo nucifera) accessions assessed by simple sequence repeats

Author keywords

Genetic diversity; microsatellite; Nelumbo nucifera; population structure

Indexed keywords

ALLELE; AQUATIC PLANT; BAYESIAN ANALYSIS; CLUSTER ANALYSIS; CROP PLANT; CULTIVAR; DICOTYLEDON; GENETIC ANALYSIS; GENETIC DIFFERENTIATION; GENETIC MARKER; GERMPLASM; HETEROZYGOSITY; PERENNIAL PLANT; POPULATION STRUCTURE;

EID: 80054820302     PISSN: 00034746     EISSN: 17447348     Source Type: Journal    
DOI: 10.1111/j.1744-7348.2011.00509.x     Document Type: Article
Times cited : (19)

References (34)
  • 1
    • 33746719343 scopus 로고    scopus 로고
    • Assessing genetic diversity and population structure in a citrus germplasm collection utilizing simple sequence repeat markers (SSRs)
    • Barkley N.A., Roose M.L., Krueger R.R., Federici C.T., (2006) Assessing genetic diversity and population structure in a citrus germplasm collection utilizing simple sequence repeat markers (SSRs). Theoretical and Applied Genetics, 112, 1519-1531.
    • (2006) Theoretical and Applied Genetics , vol.112 , pp. 1519-1531
    • Barkley, N.A.1    Roose, M.L.2    Krueger, R.R.3    Federici, C.T.4
  • 2
    • 0019302053 scopus 로고
    • Construction of a genetic linkage map in man using restriction fragment length polymorphisms
    • Botstein D., White R.L., Skolnick M., Davis R.W., (1980) Construction of a genetic linkage map in man using restricted fragment length polymorphism. American Journal of Human Genetics, 23, 314-331. (Pubitemid 11105557)
    • (1980) American Journal of Human Genetics , vol.32 , Issue.3 , pp. 314-331
    • Botstein, D.1    White, R.L.2    Skolnick, M.3    Davis, R.W.4
  • 3
    • 46149106355 scopus 로고    scopus 로고
    • ISSR analysis of genetic diversity in sacred lotus cultivars
    • Chen Y., Zhou R., Lin X., Wu K., Qian X., Huang S., (2008) ISSR analysis of genetic diversity in sacred lotus cultivars. Aquatic Botany, 89, 311-316.
    • (2008) Aquatic Botany , vol.89 , pp. 311-316
    • Chen, Y.1    Zhou, R.2    Lin, X.3    Wu, K.4    Qian, X.5    Huang, S.6
  • 4
    • 0031773296 scopus 로고    scopus 로고
    • The use of random amplified microsatellite polymorphic DNA and coefficients of parentage to determine genetic relationships in barley
    • Davila J.A., Sanchez de la Hoz M.P., Loarce Y., Ferrer E., (1998) The use of random amplified microsatellite polymorphic DNA and coefficients of parentage to determine genetic relationships in barley. Genome, 41, 477-486. (Pubitemid 28532087)
    • (1998) Genome , vol.41 , Issue.4 , pp. 477-486
    • Davila, J.A.1    Sanchez De La Hoz, M.P.2    Loarce, Y.3    Ferrer, E.4
  • 5
    • 0002594984 scopus 로고
    • A rapid DNA isolation procedure for small quantities of fresh leaf tissue
    • Doyle J.J., Doyle J.L., (1987) A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochemical Bulletin, 19, 11-15.
    • (1987) Phytochemical Bulletin , vol.19 , pp. 11-15
    • Doyle, J.J.1    Doyle, J.L.2
  • 6
    • 21244479740 scopus 로고    scopus 로고
    • Detecting the number of clusters of individuals using the software STRUCTURE: A simulation study
    • DOI 10.1111/j.1365-294X.2005.02553.x
    • Evanno G., Regnaut S., Goudet J., (2005) Detecting the number of clusters of individuals using the software Structure: a simulation study. Molecular Ecology, 14, 2611-2620. (Pubitemid 40886055)
    • (2005) Molecular Ecology , vol.14 , Issue.8 , pp. 2611-2620
    • Evanno, G.1    Regnaut, S.2    Goudet, J.3
  • 7
    • 85007110786 scopus 로고    scopus 로고
    • Arlequin ver. 3.0: An integrated software package for population genetics data analysis
    • Excoffier L., Laval G., Schneider S., (2005) Arlequin ver. 3.0: an integrated software package for population genetics data analysis. Evolutionary Bioinformatics Online, 1, 47-50.
    • (2005) Evolutionary Bioinformatics Online , vol.1 , pp. 47-50
    • Excoffier, L.1    Laval, G.2    Schneider, S.3
  • 8
    • 34447120219 scopus 로고    scopus 로고
    • Inference of population structure using multilocus genotype data: Dominant markers and null alleles
    • DOI 10.1111/j.1471-8286.2007.01758.x
    • Falush D., Stephens M., Pritchard J.K., (2007) Inference of population structure using multilocus genotype data: dominant markers and null alleles. Molecular Ecology Notes, 7, 574-578. (Pubitemid 47035522)
    • (2007) Molecular Ecology Notes , vol.7 , Issue.4 , pp. 574-578
    • Falush, D.1    Stephens, M.2    Pritchard, J.K.3
  • 9
    • 63949086890 scopus 로고    scopus 로고
    • Cultivation of lotus (Nelumbo nucifera Gaertn. ssp. nucifera) and its utilization in China
    • Guo H.B., (2009) Cultivation of lotus (Nelumbo nucifera Gaertn. ssp. nucifera) and its utilization in China. Genetic Resources and Crop Evolution, 56, 323-330.
    • (2009) Genetic Resources and Crop Evolution , vol.56 , pp. 323-330
    • Guo, H.B.1
  • 10
    • 34447332269 scopus 로고    scopus 로고
    • Genetic diversity of Nelumbo accessions revealed by RAPD
    • DOI 10.1007/s10722-006-0025-1
    • Guo H., Li S., Peng J., Ke W., (2007) Genetic diversity of Nelumbo accessions revealed by RAPD. Genetic Resources and Crop Evolution, 54, 741-748. (Pubitemid 47055828)
    • (2007) Genetic Resources and Crop Evolution , vol.54 , Issue.4 , pp. 741-748
    • Guo, H.B.1    Li, S.M.2    Peng, J.3    Ke, W.D.4
  • 11
    • 80054807514 scopus 로고    scopus 로고
    • Genetic variability and interrelationships among morphological and agronomical characteristics in rhizome lotus (Nelumbo nucifera Gaertn. ssp. nucifera) germplasms
    • Guo H.B., Ke W.D., Li S.M., (2010a) Genetic variability and interrelationships among morphological and agronomical characteristics in rhizome lotus (Nelumbo nucifera Gaertn. ssp. nucifera) germplasms. Journal of Wuhan Botanical Research, 28, 126-136.
    • (2010) Journal of Wuhan Botanical Research , vol.28 , pp. 126-136
    • Guo, H.B.1    Ke, W.D.2    Li, S.M.3
  • 12
    • 80054806225 scopus 로고    scopus 로고
    • Morphological diversity of flower lotus (Nelumbo nucifera Gaertn. ssp. nucifera) germplasms
    • Guo H.B., Ke W.D., Li S.M., (2010b) Morphological diversity of flower lotus (Nelumbo nucifera Gaertn. ssp. nucifera) germplasms. Bulletin of Botanical Research, 30, 70-80.
    • (2010) Bulletin of Botanical Research , vol.30 , pp. 70-80
    • Guo, H.B.1    Ke, W.D.2    Li, S.M.3
  • 13
    • 33750982088 scopus 로고    scopus 로고
    • Genetic variation and clonal diversity in populations of Nelumbo nucifera (Nelumbonaceae) in central China detected by ISSR markers
    • DOI 10.1016/j.aquabot.2006.09.007, PII S0304377006001355
    • Han Y., Teng C., Zhong S., Zhou M., Hu Z., Song Y., (2007a) Genetic variation and clonal diversity in populations of Nelumbo nucifera (Nelumbonaceae) in central China detected by ISSR markers. Aquatic Botany, 86, 69-75. (Pubitemid 44751356)
    • (2007) Aquatic Botany , vol.86 , Issue.1 , pp. 69-75
    • Han, Y.-C.1    Teng, C.-Z.2    Zhong, S.3    Zhou, M.-Q.4    Hu, Z.-L.5    Song, Y.-C.6
  • 14
    • 34250856369 scopus 로고    scopus 로고
    • Analyses of genetic relationships in Nelumbo nucifera using nuclear ribosomal ITS sequence data, ISSR and RAPD markers
    • DOI 10.1016/j.aquabot.2007.04.005, PII S0304377007000538
    • Han Y., Teng C., Chang F., Robert G., Zhou M., Hu Z., Song Y., (2007b) Analyses of genetic relationships in Nelumbo nucifera using nuclear ribosomal ITS sequence data, ISSR and RAPD markers. Aquatic Botany, 87, 141-146. (Pubitemid 46991147)
    • (2007) Aquatic Botany , vol.87 , Issue.2 , pp. 141-146
    • Han, Y.-C.1    Teng, C.-Z.2    Chang, F.-H.3    Robert, G.W.4    Zhou, M.-Q.5    Hu, Z.-L.6    Song, Y.-C.7
  • 16
    • 0003377778 scopus 로고
    • Abundance and characterization of simple sequence repeats (SSRs) isolated from a size-fractionated genomic library of Brassica napus L. (rapeseed)
    • Kresovich S., Szewe-McFadden A.K., Bliek S.M., McFerson J.R., (1995) Abundance and characterization of simple sequence repeats (SSRs) isolated from a size-fractionated genomic library of Brassica napus L. (rapeseed). Theoretical and Applied Genetics, 91, 206-211.
    • (1995) Theoretical and Applied Genetics , vol.91 , pp. 206-211
    • Kresovich, S.1    Szewe-Mcfadden, A.K.2    Bliek, S.M.3    McFerson, J.R.4
  • 17
    • 56449118750 scopus 로고    scopus 로고
    • Development and characterization of simple sequence repeat (SSR) markers in the water lotus (Nelumbo nucifera)
    • Kubo N., Hirai M., Kaneko A., Tanaka D., Kasumi K., (2009) Development and characterization of simple sequence repeat (SSR) markers in the water lotus (Nelumbo nucifera). Aquatic Botany, 90, 191-194.
    • (2009) Aquatic Botany , vol.90 , pp. 191-194
    • Kubo, N.1    Hirai, M.2    Kaneko, A.3    Tanaka, D.4    Kasumi, K.5
  • 18
    • 0014054519 scopus 로고
    • The detection of disease clustering and generalized regression approach
    • Mantel N.A., (1967) The detection of disease clustering and generalized regression approach. Cancer Research, 27, 209-220.
    • (1967) Cancer Research , vol.27 , pp. 209-220
    • Mantel, N.A.1
  • 19
    • 1642555297 scopus 로고    scopus 로고
    • Genetic diversity in three groups of barley germplasm assessed by simple sequence repeats
    • DOI 10.1139/g02-071
    • Matus I.A., Hayes P.M., (2002) Genetic diversity in three groups of barley germplasm assessed by simple sequence repeats. Genome, 45, 1095-1106. (Pubitemid 351194303)
    • (2002) Genome , vol.45 , Issue.6 , pp. 1095-1106
    • Matus, I.A.1    Hayes, P.M.2
  • 21
    • 1542447720 scopus 로고
    • Beijing, China: Science Press (in Chinese).
    • Ni X.M., Zhao J.R., (1987) Chinese Lotus. Beijing, China: Science Press (in Chinese). pp. 2-3.
    • (1987) Chinese Lotus. , pp. 2-3
    • Ni, X.M.1    Zhao, J.R.2
  • 22
    • 33646773975 scopus 로고    scopus 로고
    • Anti-obesity effect of Nelumbo nucifera leaves extract in mice and rats
    • DOI 10.1016/j.jep.2005.12.036, PII S0378874106000067
    • Ono Y., Hattori E., Fukaya Y., Imai S., Ohizumi Y., (2006) Anti-obesity effect of Nelumbo nucifera leaves extract in mice and rats. Journal of Ethnopharmacology, 106, 238-244. (Pubitemid 43766196)
    • (2006) Journal of Ethnopharmacology , vol.106 , Issue.2 , pp. 238-244
    • Ono, Y.1    Hattori, E.2    Fukaya, Y.3    Imai, S.4    Ohizumi, Y.5
  • 23
    • 35848950437 scopus 로고    scopus 로고
    • Isolation and characterization of microsatellite markers in the sacred lotus (Nelumbo nucifera Gaertn.)
    • DOI 10.1111/j.1471-8286.2007.01774.x
    • Pan L., Quan Z., Li S., Liu H., Huang X., Ke W., Ding Y., (2007) Isolation and characterization of microsatellite markers in the sacred lotus (Nelumbo nucifera Gaertn.). Molecular Ecology Notes, 7, 1054-1056. (Pubitemid 350059184)
    • (2007) Molecular Ecology Notes , vol.7 , Issue.6 , pp. 1054-1056
    • Pan, L.1    Quan, Z.2    Li, S.3    Liu, H.4    Huang, X.5    Ke, W.6    Ding, Y.7
  • 24
    • 0034118493 scopus 로고    scopus 로고
    • Inference of population structure using multilocus genotype data
    • Pritchard J.K., Stephens M., Donnelly P., (2000) Inference of population structure using multilocus genotype data. Genetics, 155, 945-959. (Pubitemid 30397141)
    • (2000) Genetics , vol.155 , Issue.2 , pp. 945-959
    • Pritchard, J.K.1    Stephens, M.2    Donnelly, P.3
  • 26
    • 33751009146 scopus 로고    scopus 로고
    • A penalty of using anonymous dominant markers (AFLPs, ISSRs, and RAPDs) for phylogenetic inference
    • DOI 10.1016/j.ympev.2006.08.008, PII S1055790306003174
    • Simmons M., Zhang L., Webb C., Muller K., (2007) A penalty of using anonymous dominant markers (AFLPs, ISSRs, and. RAPDs) for phylogenetic inference. Molecular Phylogenetics and Evolution, 42, 528-542. (Pubitemid 44751523)
    • (2007) Molecular Phylogenetics and Evolution , vol.42 , Issue.2 , pp. 528-542
    • Simmons, M.P.1    Zhang, L.-B.2    Webb, C.T.3    Muller, K.4
  • 27
    • 0034049566 scopus 로고    scopus 로고
    • Evaluation of antipyretic potential of Nelumbo nucifera stalk extract
    • DOI 10.1002/1099-1573(200006)14:4<272::AID-PTR556>3.0.CO;2-H
    • Sinha S., Mukherjee P.K., Mukherjee K., Pal M., Mandal S.C., Saha B.P., (2000) Evaluation of antipyretic potential of Nelumbo nucifera stalk extract. Phytotherapy Research, 14, 272-274. (Pubitemid 30410056)
    • (2000) Phytotherapy Research , vol.14 , Issue.4 , pp. 272-274
    • Sinha, S.1    Mukherjee, P.K.2    Mukherjee, K.3    Pal, M.4    Mandal, S.C.5    Saha, B.P.6
  • 28
    • 0037358098 scopus 로고    scopus 로고
    • Hepatoprotective and free radical scavenging effects of Nelumbo nucifera
    • DOI 10.1078/094471103321659889
    • Sohn D.H., Kim Y.C., Oh S.H., Park E.J., Li X., Lee B.H., (2003) Hepatoprotective and free radical scavenging effects of Nelumbo nucifera. Phytomedicine, 10, 165-169. (Pubitemid 36433212)
    • (2003) Phytomedicine , vol.10 , Issue.2-3 , pp. 165-169
    • Sohn, D.-H.1    Kim, Y.-C.2    Oh, S.-H.3    Park, E.-J.4    Li, X.5    Lee, B.-H.6
  • 29
    • 0034192091 scopus 로고    scopus 로고
    • Efficient genetic markers for population biology
    • DOI 10.1016/S0169-5347(00)01825-5, PII S0169534700018255
    • Sunnucks P., (2000) Efficient genetic markers for population biology. Trends in Ecology & Evolution, 15, 199-203. (Pubitemid 30226279)
    • (2000) Trends in Ecology and Evolution , vol.15 , Issue.5 , pp. 199-203
    • Sunnucks, P.1
  • 30
    • 43049127725 scopus 로고    scopus 로고
    • Genetic diversity and relationships of lotus (Nelumbo) cultivars based on allozyme and ISSR markers
    • Tian H., Xue J., Wen J., Mitchell G., Zhou S., (2008a) Genetic diversity and relationships of lotus (Nelumbo) cultivars based on allozyme and ISSR markers. Scientia Horticulturae, 116, 421-429.
    • (2008) Scientia Horticulturae , vol.116 , pp. 421-429
    • Tian, H.1    Xue, J.2    Wen, J.3    Mitchell, G.4    Zhou, S.5
  • 31
    • 50249115671 scopus 로고    scopus 로고
    • Development and characterization of microsatellite loci for lotus (Nelumbo nucifera)
    • Tian H., Chen X., Wang J.X., Xue J., Wen J., Mitchell G., Zhou S., (2008b) Development and characterization of microsatellite loci for lotus (Nelumbo nucifera). Conservation Genetics, 9, 1385-1388.
    • (2008) Conservation Genetics , vol.9 , pp. 1385-1388
    • Tian, H.1    Chen, X.2    Wang, J.X.3    Xue, J.4    Wen, J.5    Mitchell, G.6    Zhou, S.7
  • 32
    • 33748856941 scopus 로고    scopus 로고
    • Genetic diversity and geographic pattern of wild lotus (Nelumbo nucifera) in Heilongjiang Province
    • DOI 10.1007/s11434-006-0421-0
    • Xue J., Zhuo L., Zhou S., (2006) Genetic diversity and geographic pattern of wild lotus (Nelumbo nucifera) in Heilongjiang Province. Chinese Science Bulletin, 51, 421-432. (Pubitemid 44422197)
    • (2006) Chinese Science Bulletin , vol.51 , Issue.4 , pp. 421-432
    • Xue, J.1    Zhuo, L.2    Zhou, S.3
  • 33
    • 0003907217 scopus 로고    scopus 로고
    • Microsoft window-based freeware for population genetic analysis. Edmonton, Canada: University of Alberta
    • Yeh F.C., Yang R.C., Boyle T., (1999) POPGENE, version 1.31, Microsoft window-based freeware for population genetic analysis. Edmonton, Canada: University of Alberta.
    • (1999) POPGENE, Version 1.31
    • Yeh, F.C.1    Yang, R.C.2    Boyle, T.3
  • 34
    • 0036007439 scopus 로고    scopus 로고
    • Strategies for microsatellite isolation: A review
    • DOI 10.1046/j.0962-1083.2001.01418.x
    • Zane L., Bargelloni L., Patarnello T., (2002) Strategies for microsatellite isolation: a review. Molecular Ecology, 11, 1-16. (Pubitemid 34108467)
    • (2002) Molecular Ecology , vol.11 , Issue.1 , pp. 1-16
    • Zane, L.1    Bargelloni, L.2    Patarnello, T.3


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