메뉴 건너뛰기




Volumn 112, Issue 8, 2006, Pages 1519-1531

Assessing genetic diversity and population structure in a citrus germplasm collection utilizing simple sequence repeat markers (SSRs)

Author keywords

[No Author keywords available]

Indexed keywords

BIODIVERSITY; DNA SEQUENCES; GENES;

EID: 33746719343     PISSN: 00405752     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00122-006-0255-9     Document Type: Article
Times cited : (334)

References (38)
  • 1
    • 0037709803 scopus 로고    scopus 로고
    • Development and characterization of microsatellite markers in Citrus
    • Ahmad R, Struss D, Southwick SM (2003) Development and characterization of microsatellite markers in Citrus. J Amer Soc Hort Sci 128:584-590
    • (2003) J Amer Soc Hort Sci , vol.128 , pp. 584-590
    • Ahmad, R.1    Struss, D.2    Southwick, S.M.3
  • 2
    • 0001161127 scopus 로고
    • A numerical taxonomic study of aYnity relationships in cultivated Citrus and its close relatives
    • Barrett HC, Rhodes AM (1976) A numerical taxonomic study of aYnity relationships in cultivated Citrus and its close relatives. Syst Bot 1:105-136
    • (1976) Syst Bot , vol.1 , pp. 105-136
    • Barrett, H.C.1    Rhodes, A.M.2
  • 3
    • 0019302053 scopus 로고
    • Construction of a genetic linkage map in man using restriction fragment length polymorphisms
    • Botstein D, White RL, Skolnick M, Davis RW (1980) Construction of a genetic linkage map in man using restriction fragment length polymorphisms. Am J Hum Genet 32:314-331
    • (1980) Am J Hum Genet , vol.32 , pp. 314-331
    • Botstein, D.1    White, R.L.2    Skolnick, M.3    Davis, R.W.4
  • 5
    • 0035192313 scopus 로고    scopus 로고
    • The diversiWcation of Citrus clementina Hort. Ex Tan., a vegetatively propagated crop species
    • Bretó MP, Ruiz C, Pina JA, Asins MJ (2001) The diversiWcation of Citrus clementina Hort. Ex Tan., a vegetatively propagated crop species. Mol Phyl and Evol 21:285-293
    • (2001) Mol Phyl and Evol , vol.21 , pp. 285-293
    • Bretó, M.P.1    Ruiz, C.2    Pina, J.A.3    Asins, M.J.4
  • 7
    • 0034890901 scopus 로고    scopus 로고
    • Simple sequence repeat analysis of a clonally propagated species: A tool for managing a grape germplasm collection
    • Dangl GS, Mendum ML, Prins BH, Walker MA, Meredith CP, Simon CJ (2001) Simple sequence repeat analysis of a clonally propagated species: a tool for managing a grape germplasm collection. Genome 44:432-438
    • (2001) Genome , vol.44 , pp. 432-438
    • Dangl, G.S.1    Mendum, M.L.2    Prins, B.H.3    Walker, M.A.4    Meredith, C.P.5    Simon, C.J.6
  • 8
    • 0030762202 scopus 로고    scopus 로고
    • IdentiWcation of closely related Citrus cultivars with inter-simple sequence repeat markers
    • Fang DQ, Roose ML (1997) IdentiWcation of closely related Citrus cultivars with inter-simple sequence repeat markers. Theor Appl Genet 95:408-417
    • (1997) Theor Appl Genet , vol.95 , pp. 408-417
    • Fang, D.Q.1    Roose, M.L.2
  • 9
    • 0030841468 scopus 로고    scopus 로고
    • Fingerprinting trifoliate orange germplasm accessions with isozymes, RFLPs, and inter-simple sequence repeat markers
    • Fang DQ, Roose ML, Krueger RR, Federici CT (1997) Fingerprinting trifoliate orange germplasm accessions with isozymes, RFLPs, and inter-simple sequence repeat markers. Theor Appl Genet 95:211-219
    • (1997) Theor Appl Genet , vol.95 , pp. 211-219
    • Fang, D.Q.1    Roose, M.L.2    Krueger, R.R.3    Federici, C.T.4
  • 10
    • 0031804602 scopus 로고    scopus 로고
    • Phylogenetic relationships within the genus Citrus (Rutaceae) and related genera as revealed by RFLP and RAPD analysis
    • Federici CT, Fang DQ, Scora RW, Roose ML (1998) Phylogenetic relationships within the genus Citrus (Rutaceae) and related genera as revealed by RFLP and RAPD analysis. Theor Appl Genet 94:812-822
    • (1998) Theor Appl Genet , vol.94 , pp. 812-822
    • Federici, C.T.1    Fang, D.Q.2    Scora, R.W.3    Roose, M.L.4
  • 11
    • 0001283497 scopus 로고
    • The plastome of Citrus: Physical map, variation among Citrus cultivars and species and comparison with related genera
    • Green RM, Vardi A, Galun E, (1986) The plastome of Citrus: physical map, variation among Citrus cultivars and species and comparison with related genera. Theor Appl Genet 72:170-177
    • (1986) Theor Appl Genet , vol.72 , pp. 170-177
    • Green, R.M.1    Vardi, A.2    Galun, E.3
  • 12
    • 0035056108 scopus 로고    scopus 로고
    • Lemons: Diversity and relationships with selected Citrus genotypes as measured with nuclear genome markers
    • Gulsen O, Roose ML (2001a) Lemons: diversity and relationships with selected Citrus genotypes as measured with nuclear genome markers. J Amer Soc Hort Sci 126:309-327
    • (2001) J Amer Soc Hort Sci , vol.126 , pp. 309-327
    • Gulsen, O.1    Roose, M.L.2
  • 13
    • 0035101557 scopus 로고    scopus 로고
    • Chloroplast and nuclear genome analysis of the parentage of lemons
    • Gulsen O, Roose ML (2001b) Chloroplast and nuclear genome analysis of the parentage of lemons. J Amer Soc Hort Sci 126:210-215
    • (2001) J Amer Soc Hort Sci , vol.126 , pp. 210-215
    • Gulsen, O.1    Roose, M.L.2
  • 14
    • 0030450208 scopus 로고    scopus 로고
    • Genetic diversity in the orange subfamily Aurantioideae. I. Intraspecies and intragenus genetic variability
    • Herrero R, Asins MJ, Carbonell EA, Navarro L (1996) Genetic diversity in the orange subfamily Aurantioideae. I. Intraspecies and intragenus genetic variability. Theor Appl Genet 92:599-609
    • (1996) Theor Appl Genet , vol.92 , pp. 599-609
    • Herrero, R.1    Asins, M.J.2    Carbonell, E.A.3    Navarro, L.4
  • 15
    • 0001766224 scopus 로고
    • Horticultural varieties of citrus
    • In: Reuther W, Webber HJ, Batchelor LD (eds), University of California Press, Berkeley
    • Hodgson RW (1967) Horticultural varieties of citrus. In: Reuther W, Webber HJ, Batchelor LD (eds) The Citrus Industry. Vol I. University of California Press, Berkeley, pp 431-591
    • (1967) The Citrus Industry , vol.1 , pp. 431-591
    • Hodgson, R.W.1
  • 16
    • 0031742161 scopus 로고    scopus 로고
    • Microsatellite (SSR) markers reveal genetic identities, genetic diversity and relationships in a Malus × domestica borkh
    • Hokanson SC, Szewc-McFadden AK, Lamboy WF, McFerson JR (1998) Microsatellite (SSR) markers reveal genetic identities, genetic diversity and relationships in a Malus × domestica borkh. Core subset collection. Theor Appl Genet 97:671-683
    • (1998) Core subset collection. Theor Appl Genet , vol.97 , pp. 671-683
    • Hokanson, S.C.1    Szewc-McFadden, A.K.2    Lamboy, W.F.3    McFerson, J.R.4
  • 17
    • 57149084374 scopus 로고    scopus 로고
    • Microsatellites and molecular breeding: Exploitation of microsatellite variability for the analysis of a monotonous genome
    • In, Kluwer, London
    • Jain MS, Brar DS, Ahloowalia BS (2002) Microsatellites and molecular breeding: exploitation of microsatellite variability for the analysis of a monotonous genome. In: Molecular techniques in crop improvement. Kluwer, London, pp 85-135
    • (2002) Molecular techniques in crop improvement , pp. 85-135
    • Jain, M.S.1    Brar, D.S.2    Ahloowalia, B.S.3
  • 18
    • 0000268847 scopus 로고
    • A genetic map of Citrus based on the segregation of isozymes and RFLPs in an intergeneric cross
    • Jarrell DC, Roose ML, Traugh SN, Kupper RS (1992) A genetic map of Citrus based on the segregation of isozymes and RFLPs in an intergeneric cross. Theor Appl Genet 84:49-56
    • (1992) Theor Appl Genet , vol.84 , pp. 49-56
    • Jarrell, D.C.1    Roose, M.L.2    Traugh, S.N.3    Kupper, R.S.4
  • 19
    • 0030990796 scopus 로고    scopus 로고
    • Integration of trinucleotide microsatellites into a linkage map of Citrus
    • Kijas JM, Thomas MR, Fowler JC, Roose ML (1997) Integration of trinucleotide microsatellites into a linkage map of Citrus. Theor Appl Genet 94:701-706
    • (1997) Theor Appl Genet , vol.94 , pp. 701-706
    • Kijas, J.M.1    Thomas, M.R.2    Fowler, J.C.3    Roose, M.L.4
  • 20
    • 0347991996 scopus 로고    scopus 로고
    • Genetic structure and diversity among Maize inbred lines as inferred from DNA microsatellites
    • Liu K, Goodman M, Muse S, Smith JS, Buckler E, Doebley J (2003) Genetic structure and diversity among Maize inbred lines as inferred from DNA microsatellites. Genetics 165:2117-2128
    • (2003) Genetics , vol.165 , pp. 2117-2128
    • Liu, K.1    Goodman, M.2    Muse, S.3    Smith, J.S.4    Buckler, E.5    Doebley, J.6
  • 21
    • 0028830039 scopus 로고
    • DNA ampliWed Wngerprinting, a useful tool for determination of genetic origin and diversity analysis in Citrus
    • Luro F, Laigret F, Bove JM, Ollitrault P (1995) DNA ampliWed Wngerprinting, a useful tool for determination of genetic origin and diversity analysis in Citrus. Hort Sci 30:1063-1067
    • (1995) Hort Sci , vol.30 , pp. 1063-1067
    • Luro, F.1    Laigret, F.2    Bove, J.M.3    Ollitrault, P.4
  • 22
    • 0032077236 scopus 로고    scopus 로고
    • Statistical conWdence for likelihood-based paternity inference in natural populations
    • Marshall TC, Slate J, Kruuk LEB, Pemberton JM (1998) Statistical conWdence for likelihood-based paternity inference in natural populations. Mol Ecol 7:639-655
    • (1998) Mol Ecol , vol.7 , pp. 639-655
    • Marshall, T.C.1    Slate, J.2    Kruuk, L.E.B.3    Pemberton, J.M.4
  • 25
    • 0034118493 scopus 로고    scopus 로고
    • Inference of population structure using multilocus genotype data
    • Pritchard J, Stephens M, Donnelly P (2000) Inference of population structure using multilocus genotype data. Genetics 155:945-959
    • (2000) Genetics , vol.155 , pp. 945-959
    • Pritchard, J.1    Stephens, M.2    Donnelly, P.3
  • 28
    • 0033990048 scopus 로고    scopus 로고
    • In: Krawetz S, Misener S (eds), Humana Press, Totowa, Primer3 on the WWW for general users and for biologist programmers
    • Rozen S, Skaletsky H (2000) Primer3 on the WWW for general users and for biologist programmers. In: Krawetz S, Misener S (eds) Bioinformatics methods and protocols: methods in molecular biology. Humana Press, Totowa, pp 365-386
    • (2000) Bioinformatics methods and protocols: Methods in molecular biology , pp. 365-386
    • Rozen, S.1    Skaletsky, H.2
  • 29
    • 0001093936 scopus 로고
    • On the history and origin of Citrus
    • Scora RW (1975) On the history and origin of Citrus. Bull Torr Bot Club 102:369-375
    • (1975) Bull Torr Bot Club , vol.102 , pp. 369-375
    • Scora, R.W.1
  • 31
    • 7144225911 scopus 로고
    • Taxonomic and physiological relationships of the so-called mandarin-lime group of citrus
    • Singh R, Schroeder CA (1962) Taxonomic and physiological relationships of the so-called mandarin-lime group of citrus. Proc Amer Soc Hort Sci 80:291-295
    • (1962) Proc Amer Soc Hort Sci , vol.80 , pp. 291-295
    • Singh, R.1    Schroeder, C.A.2
  • 32
    • 7344254829 scopus 로고
    • Construction of integrated genetic linkage maps by means of a new computer package: JoinMap
    • Stam P (1993) Construction of integrated genetic linkage maps by means of a new computer package: JoinMap. Plant J 3:739-744
    • (1993) Plant J , vol.3 , pp. 739-744
    • Stam, P.1
  • 33
    • 0001072585 scopus 로고
    • The botany of Citrus and its wild relatives
    • In: Reuther W, Webber HJ, Batchelor LD (eds), University of California Press, Berkeley
    • Swingle WT, Reece PC (1967) The botany of Citrus and its wild relatives. In: Reuther W, Webber HJ, Batchelor LD (eds) The Citrus Industry. Vol 1. University of California Press, Berkeley, pp 190-430
    • (1967) The Citrus Industry , vol.1 , pp. 190-430
    • Swingle, W.T.1    Reece, P.C.2
  • 34
    • 0004248459 scopus 로고    scopus 로고
    • PAUP*, (*and other methods). Version 4. Sinauer Associates, Sunderland
    • Swo Vord DL (1998) PAUP*. Phylogenetic analysis using parismony (*and other methods). Version 4. Sinauer Associates, Sunderland
    • (1998) Phylogenetic analysis using parismony
    • Swo Vord, D.L.1
  • 35
    • 0003077065 scopus 로고
    • Fundamental discussion of Citrus classiWcation
    • Tanaka T (1977) Fundamental discussion of Citrus classiWcation. Stud Citrologia 14:1-6
    • (1977) Stud Citrologia , vol.14 , pp. 1-6
    • Tanaka, T.1
  • 36
    • 51249174824 scopus 로고
    • DNA extraction from a previously recalcitrant plant genus
    • Webb DM, Knapp SJ (1990) DNA extraction from a previously recalcitrant plant genus. Plant Mol Bio 8:180-185
    • (1990) Plant Mol Bio , vol.8 , pp. 180-185
    • Webb, D.M.1    Knapp, S.J.2
  • 37
    • 0027161022 scopus 로고
    • Mutation of human short tandem repeats
    • Weber JL, Wong C (1993) Mutation of human short tandem repeats. Hum Mol Genet 2:1123-1128
    • (1993) Hum Mol Genet , vol.2 , pp. 1123-1128
    • Weber, J.L.1    Wong, C.2
  • 38
    • 0343023711 scopus 로고
    • Cultivated varieties of citrus
    • In: Webber HJ, Batchelor LD (eds), University of California Press, Berkeley
    • Webber JH (1943) Cultivated varieties of citrus. In: Webber HJ, Batchelor LD (eds) The Citrus Industry. Vol 1. University of California Press, Berkeley. pp 475-668
    • (1943) The Citrus Industry , vol.1 , pp. 475-668
    • Webber, J.H.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.