Genetic variation and clonal diversity in populations of Nelumbo nucifera (Nelumbonaceae) in central China detected by ISSR markers

Aquatic Botany

Volumn 86, Issue 1, 2007, Pages 69-75

  Han, Yan Chuang ^a   Teng, Cai Zhu ^c   Zhong, Sheng ^a   Zhou, Ming Quan ^b   Hu, Zhong Li ^a,b   Song, Yun Chun ^a  

^a BEIJING UNIVERSITY OF POSTS AND TELECOMMUNICATIONS   (China)

^b WUHAN UNIVERSITY   (China)

^c GUANGXI NORMAL UNIVERSITY   (China)

Author keywords

Clonal diversity; Genetic variation; ISSR; Nelumbo nucifera

Indexed keywords

AQUATIC PLANT; CLONAL ORGANISM; CONSERVATION PLANNING; GENETIC DIFFERENTIATION; GENETIC VARIATION; POPULATION STRUCTURE; SPECIES CONSERVATION; SPECIES DIVERSITY;

ASIA; CHINA; EURASIA; FAR EAST;

NELUMBO; NELUMBO NUCIFERA; NELUMBONACEAE;

EID: 33750982088     PISSN: 03043770     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.aquabot.2006.09.007     Document Type: Article

References (36)

1. Ayala F.J., and Kiger J.A. Modern Genetics. 2nd ed. (1984), Benjamin/Cummings, Menlo Park, USA
2. Barrett S.C.H., Eckert C.G., and Husband B.C. Evolutionary processes in aquatic plant populations. Aquat. Bot. 44 (1993) 105-145
3. Bornet B., Goraguer F., Joly G., and Branchard M. Genetic diversity in European and Arentinian cultivated potatoes (Solanum tuberosum subsp. tuberosum) detected by inter-simple sequence repeats (ISSRs). Genome 45 (2002) 481-484
4. Bussell J.D. The distribution of random amplified polymorphic DNA (RAPD) diversity amongst populations of Isotoma petraea (Lobeliaceae). Mol. Ecol. 8 (1999) 775-789
5. Chen J.M., Liu X., Gituru W.R., Wang J.Y., and Wang Q.F. Genetic variation within the endangered quillwort Isoetes hypsophila (Isoetaceae) in China as evidenced by ISSR analysis. Aquat. Bot. 82 (2005) 89-98
6. Chen J.M., Gituru W.R., Wang Y.H., and Wang Q.F. The extent of clonality and genetic diversity in the rare Caldesia grandis (Alismataceae): comparative results for RAPD and ISSR markers. Aquat. Bot. 84 (2006) 301-307
7. Doyle J.J., and Doyle J.L. A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem. Bull. 19 (1987) 11-15
8. Dong Y.C., and Zheng D.S. Summary of National Key Agriculture Wild Plant Protection (2005), Chinese Meteorologic Publishing Company, Beijing pp. 122
9. Ellstrand N.C., and Roose M.L. Patterns of genotypic diversity in clonal plant species. Am. J. Bot. 74 (1987) 123-131
10. Excoffier L., Smouse P.E., and Quattro J.M. Analysis of molecular variance inferred from metric distance among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics 131 (1992) 479-491
11. Fager E.W. Diversity: a sampling study. Am. Nat. 106 (1972) 293-310
12. Fahima T., Rôder M.S., Wendehake K., Kirzhner V.M., and Nevo E. Microsatellite polpymorphism in natural populations of wild emmer wheat, Trititum dicoccoides in Israel. Theor. Appl. Gent. 104 (2002) 17-29
13. Gao L.Z. Microsatellite variation within and among populations of Oryza officinalis (Poaceae), an endangered wild rice from China. Mol. Ecol. 14 (2005) 4287-4297
14. Ge X.J., and Sun M. Population genetic structure of Ceriops tagal (Rhizophoraceae) in Thailand and China. Wetlands Ecol. Manag. 9 (2001) 203-209
15. Hamrick J.L., and Godt M.J.W. Conservation genetics of endemic plant species. In: Avise J.C., and Hamrick J.L. (Eds). Conservation Genetics (1996), Chapman and Hall, New York 281-304
16. Hangelbroek H.H., Ouborg N.J., Santamaría L., and Schwenk K. Clonal diversity and structure within a population of pondweed Potamogeton pectinatus foraged by Bewick's Swans. Mol. Ecol. 11 (2002) 2137-2150
17. Jian S.G., Tang T., Zhong Y., and Shi S.H. Variation in inter-simple sequence repeat (ISSR) in mangrove and non-mangrove populations of Heritiera littoralis (Sterculiaceae) from China and Australia. Aquat. Bot. 79 (2004) 75-86
18. King R.A., Gornall R.J., Preston C.D., and Croft J.M. Population differentiation of Potamogeton pectinatus in the Baltic Sea with reference to waterfowl dispersal. Mol. Ecol. 11 (2002) 1956-1974
19. Kojima T., Nagaoka T., Noda K., and Ogihara Y. Genetic linkage map of ISSR and RAPD markers in einkorn wheat in relation to that of RFLP markers. Theor. Appl. Genet. 96 (1998) 37-45
20. Li A., and Ge S. Genetic variation and clonal diversity of Psammochloa villosa (Poaceae) detected by ISSR markers. Ann. Bot. 87 (2001) 585-590
21. Mantel N.A. The detection of disease clustering and generalized regression approach. Cancer Res. 27 (1967) 209-220
22. Miller M.P. AMOVA-PREP 1.01: A Program for the Preparation of the AMOVA Input Files from Dominant-Marker Raw Data (1998), Department of Biological Sciences, Northern Arizona University, Flagstaff, AZ
23. Mukherjee P.K., Saha K., Das J., Pal M., and Saha B.P. Studies on the anti-inflammatory activity of rhizomes of Nelumbo nucifera. Planta Med. 63 (1997) 367-369
24. Parks J.C., and Werth C.R. A study of spatial features of clones in a population of bracken fern, Pteridium aquilinum (Dennstaedticaceae). Am. J. Bot. 80 (1993) 537-544
25. Qian J.Q. Cardiovascular pharmacological effects of bisbenzylisoquinoline alkaloid derivatives. Acta Pharmacol. Sin. 23 (2002) 1086-1092
26. Rohlf F.J. NTSYS-PC: Numerical Taxonomy and Multivariate Analysis System, Version 2.0 (1992), State University of New York, Stony Brook, NY
27. Schaal B.A., Leverich W.J., and Rogstad S.H. Comparison of methods for assessing genetic variation in plant conservation biology. In: Falk D.A., and Holsinger K.E. (Eds). Genetics and Conservation of Rare Plants (1991), Oxford University Press, New York 123-134
28. Shen-Miller J., William S.J., Harbottle G., Rui-Ji C., Ouyang S., Zhou K.S., Southon J.R., and Liu G.H. Long-living lotus: germination and soil r-irradiation of centuries-old fruits, and cultivation, growth, and phenotypic abnormalities of offspring. Am. J. Bot. 89 (2002) 236-247
29. Sinha S., Mukherjee P.K., Mukherjee K., Pal M., Mandal S.C., and Saha B.P. Evaluation of antipyretic potential of Nelumbo nucifera stalk extract. Phytother. Res. 14 (2000) 272-274
30. Sipes S.D., and Wolf P.G. Clonal structure and patterns of allozyme diversity in the rare endemic Cycladenia humilis var. Jonesii (Apocynaceae). Am. J. Bot. 84 (1997) 401-409
31. Slatin M. Gene flow and geographic structure of natural populations. Science (Washington, DC) 236 (1987) 787-792
32. Sneath P.H.A., and Sokal K. Numerical Taxonomy (1973), WHF, San Francisco pp. 100-308
33. Stebbins G.L. A brief summary of my ideas on evolution. Am. J. Bot. 86 (1999) 1207-1208
34. Wang Q.C., and Zhang Y.X. Lotus Varieties of China (2005), Chinese Forestry Publishing Company, Beijing pp. 26-29
35. Widén B., Cronberg N., and Widén M. Genotypic diversity, molecular markers and spatial distribution of genets in clonal plants, a literature survey. Folia Geobot. Phytotx. 29 (1994) 245-263
36. Zietkiewicz E., Rafalski A., and Labuda D. Genome fingerprinting by simple sequence repeat (SSR)-anchored polymerase chain reaction amplification. Genomics 20 (1994) 176-183