-
3
-
-
77954834323
-
Bacterial diversity in the oral cavity of 10 healthy individuals
-
20336157 10.1038/ismej.2010.30
-
EM Bik, et al. 2010 Bacterial diversity in the oral cavity of 10 healthy individuals The ISME Journal 4 962 974 20336157 10.1038/ismej.2010.30
-
(2010)
The ISME Journal
, vol.4
, pp. 962-974
-
-
Bik, E.M.1
-
4
-
-
0000633524
-
Occurrence of successful multiple insemination of females in natural populations of deer mice (Peromyscus maniculatus)
-
10.2307/2407124
-
D Birdsall D Nash 1973 Occurrence of successful multiple insemination of females in natural populations of deer mice (Peromyscus maniculatus) Evolution 27 106 110 10.2307/2407124
-
(1973)
Evolution
, vol.27
, pp. 106-110
-
-
Birdsall, D.1
Nash, D.2
-
5
-
-
0041857839
-
Estimating the prediction function and the number of unseen species in sampling with replacement
-
10.2307/2669633
-
S Boneh A Boneh R Caron 1998 Estimating the prediction function and the number of unseen species in sampling with replacement J Am Stat Assoc 93 372 379 10.2307/2669633
-
(1998)
J Am Stat Assoc
, vol.93
, pp. 372-379
-
-
Boneh, S.1
Boneh, A.2
Caron, R.3
-
6
-
-
22144466612
-
The role of bacterial interference in otitis, sinusitis and tonsillitis
-
DOI 10.1016/j.otohns.2005.03.012, PII S0194599805002573
-
I Brook 2005 The role of bacterial interference in otitis, sinusitis and tonsillitis Otolaryngol Head Neck Surg 133 139 146 16025067 10.1016/j.otohns. 2005.03.012 (Pubitemid 40980976)
-
(2005)
Otolaryngology - Head and Neck Surgery
, vol.133
, Issue.1
, pp. 139-146
-
-
Brook, I.1
-
7
-
-
33847239205
-
Preliminary characterization of the normal microbiota of the human vulva using cultivation-independent methods
-
17244812 10.1099/jmm.0.46607-0 1:CAS:528:DC%2BD2sXjt1OitLc%3D
-
CJ Brown, et al. 2007 Preliminary characterization of the normal microbiota of the human vulva using cultivation-independent methods J Med Microbiol 56 271 276 17244812 10.1099/jmm.0.46607-0 1:CAS:528: DC%2BD2sXjt1OitLc%3D
-
(2007)
J Med Microbiol
, vol.56
, pp. 271-276
-
-
Brown, C.J.1
-
8
-
-
0001155567
-
Robust estimation of population-size when capture probabilities vary among animals
-
10.2307/1936861
-
K Burnham W Overton 1979 Robust estimation of population-size when capture probabilities vary among animals Ecology 60 927 936 10.2307/1936861
-
(1979)
Ecology
, vol.60
, pp. 927-936
-
-
Burnham, K.1
Overton, W.2
-
9
-
-
67349088705
-
Lab and field experiments: Are they the same animal?
-
19281813 10.1016/j.yhbeh.2009.02.010
-
RM Calisi GE Bentley 2009 Lab and field experiments: are they the same animal? Horm Behav 56 1 10 19281813 10.1016/j.yhbeh.2009.02.010
-
(2009)
Horm Behav
, vol.56
, pp. 1-10
-
-
Calisi, R.M.1
Bentley, G.E.2
-
10
-
-
74049108922
-
BLAST+: Architecture and applications
-
10.1186/1471-2105-10-421
-
C Camacho, et al. 2009 BLAST+: architecture and applications BMC Bioinforma 10 421 10.1186/1471-2105-10-421
-
(2009)
BMC Bioinforma
, vol.10
, pp. 421
-
-
Camacho, C.1
-
11
-
-
0001463548
-
Nonparametric estimation of the number of classes in a population
-
A Chao 1984 Nonparametric estimation of the number of classes in a population Scand J Statist 11 265 270
-
(1984)
Scand J Statist
, vol.11
, pp. 265-270
-
-
Chao, A.1
-
12
-
-
84945495487
-
Estimating the number of classes via sample coverage
-
10.2307/2290471
-
A Chao 1992 Estimating the number of classes via sample coverage J Am Stat Assoc 87 210 217 10.2307/2290471
-
(1992)
J Am Stat Assoc
, vol.87
, pp. 210-217
-
-
Chao, A.1
-
13
-
-
77957888370
-
Stopping rules and estimation for recapture debugging with unequal failure rates
-
10.1093/biomet/80.1.193
-
A Chao 1993 Stopping rules and estimation for recapture debugging with unequal failure rates Biometrika 80 193 201 10.1093/biomet/80.1.193
-
(1993)
Biometrika
, vol.80
, pp. 193-201
-
-
Chao, A.1
-
14
-
-
29144464352
-
Characterization of microbial communities found in the human vagina by analysis of terminal restriction fragment length polymorphisms of 16S rRNA genes
-
DOI 10.1128/AEM.71.12.8729-8737.2005
-
M Coolen E Post C Davis L Forney 2005 Characterization of microbial communities found in the human vagina by analysis of terminal restriction fragment length polymorphisms of 16S rRNA genes Appl Environ Microb 71 8729 8737 10.1128/AEM.71.12.8729-8737.2005 1:CAS:528:DC%2BD2MXhtlehtbnO (Pubitemid 41804009)
-
(2005)
Applied and Environmental Microbiology
, vol.71
, Issue.12
, pp. 8729-8737
-
-
Coolen, M.J.L.1
Post, E.2
Davis, C.C.3
Forney, L.J.4
-
15
-
-
4043109116
-
Sexual network analysis of a gonorrhoea outbreak
-
DOI 10.1136/sti.2003.007187
-
P De A Singh T Wong W Yacoub A Jolly 2004 Sexual network analysis of a gonorrhoea outbreak Sex Transm Infect 80 280 285 15295126 10.1136/sti.2003. 007187 1:STN:280:DC%2BD2czptFOqsg%3D%3D (Pubitemid 39070789)
-
(2004)
Sexually Transmitted Infections
, vol.80
, Issue.4
, pp. 280-285
-
-
De, P.1
Singh, A.E.2
Wong, T.3
Yacoub, W.4
Jolly, A.M.5
-
16
-
-
33747827586
-
NAST: A multiple sequence alignment server for comparative analysis of 16S rRNA genes
-
DOI 10.1093/nar/gkl244
-
TZ DeSantis, et al. 2006 NAST: a multiple sequence alignment server for comparative analysis of 16S rRNA genes Nucl Acids Res 34 W394 W399 16845035 10.1093/nar/gkl244 1:CAS:528:DC%2BD28Xps1yhsL0%3D (Pubitemid 44529801)
-
(2006)
Nucleic Acids Research
, vol.34
, Issue.WEB. SERV. ISS.
-
-
DeSantis, T.Z.1
Hugenholtz, P.2
Keller, K.3
Brodie, E.L.4
Larsen, N.5
Piceno, Y.M.6
Phan, R.7
Andersen, G.L.8
-
17
-
-
56849106496
-
The pervasive effects of an antibiotic on the human gut microbiota, as revealed by deep 16S rRNA sequencing
-
10.1371/journal.pbio.0060280 1:CAS:528:DC%2BD1cXhsVOgs7vM
-
L Dethlefsen S Huse ML Sogin DA Relman 2008 The pervasive effects of an antibiotic on the human gut microbiota, as revealed by deep 16S rRNA sequencing PLoS Biol 6 2383 2400 10.1371/journal.pbio.0060280 1:CAS:528:DC%2BD1cXhsVOgs7vM
-
(2008)
PLoS Biol
, vol.6
, pp. 2383-2400
-
-
Dethlefsen, L.1
Huse, S.2
Sogin, M.L.3
Relman, D.A.4
-
18
-
-
34548344004
-
Clinal variation in MHC diversity with temperature: Evidence for the role of host-pathogen interaction on local adaptation in Atlantic salmon
-
DOI 10.1111/j.1558-5646.2007.00178.x
-
M Dionne KM Miller JJ Dodson F Caron L Bernatchez 2007 Clinical variation in MHC diversity with temperature: evidence for the role of host-pathogen interaction on local adaptation in Atlantic salmon Evolution 61 2154 2164 17767587 10.1111/j.1558-5646.2007.00178.x 1:CAS:528:DC%2BD1cXltFOqt74%3D (Pubitemid 47340760)
-
(2007)
Evolution
, vol.61
, Issue.9
, pp. 2154-2164
-
-
Dionne, M.1
Miller, K.M.2
Dodson, J.J.3
Caron, F.4
Bernatchez, L.5
-
19
-
-
79958043657
-
-
Available from
-
Drummond AJ, Ashton B, Buxton S, Cheung M, Cooper A, Duran C, Field M, Heled J, Kearse M, Markowitz S, Moir R, Stones-Havas S, Sturrock S, Thierer T, Wilson A (2011) Geneious v5.4. Available from http://www.geneious.com/. Accessed 1 July 2011
-
(2011)
Geneious v5.4
-
-
Drummond, A.J.1
Ashton, B.2
Buxton, S.3
Cheung, M.4
Cooper, A.5
Duran, C.6
Field, M.7
Heled, J.8
Kearse, M.9
Markowitz, S.10
Moir, R.11
Stones-Havas, S.12
Sturrock, S.13
Thierer, T.14
Wilson, A.15
-
20
-
-
79952063902
-
Analysis of the lung microbiome in the "healthy" smoker and in COPD
-
21364979 10.1371/journal.pone.0016384 1:CAS:528:DC%2BC3MXivVymurc%3D
-
JR Erb-Downward, et al. 2011 Analysis of the lung microbiome in the "healthy" smoker and in COPD PLoS ONE 6 e16384 21364979 10.1371/journal.pone.0016384 1:CAS:528:DC%2BC3MXivVymurc%3D
-
(2011)
PLoS ONE
, vol.6
, pp. 16384
-
-
Erb-Downward, J.R.1
-
21
-
-
0026499429
-
Conservation evaluation and phylogenetic diversity
-
10.1016/0006-3207(92)91201-3
-
D Faith 1992 Conservation evaluation and phylogenetic diversity Biol Conserv 61 1 10 10.1016/0006-3207(92)91201-3
-
(1992)
Biol Conserv
, vol.61
, pp. 1-10
-
-
Faith, D.1
-
22
-
-
34250622826
-
Loss of bacterial diversity during antibiotic treatment of intubated patients colonized with Pseudomonas aeruginosa
-
DOI 10.1128/JCM.02187-06
-
JL Flanagan, et al. 2007 Loss of bacterial diversity during antibiotic treatment of intubated patients colonized with Pseudomonas aeruginosa J Clin Microbiol 45 1954 1962 17409203 10.1128/JCM.02187-06 1:CAS:528: DC%2BD2sXnsVKqsb0%3D (Pubitemid 46933932)
-
(2007)
Journal of Clinical Microbiology
, vol.45
, Issue.6
, pp. 1954-1962
-
-
Flanagan, J.L.1
Brodie, E.L.2
Weng, L.3
Lynch, S.V.4
Garcia, O.5
Brown, R.6
Hugenholtz, P.7
DeSantis, T.Z.8
Andersen, G.L.9
Wiener-Kronish, J.P.10
Bristow, J.11
-
23
-
-
0000282935
-
Genetic evidence for long-term monogamy in a small rodent, Peromyscus polionotus
-
10.1086/283751
-
D Foltz 1981 Genetic evidence for long-term monogamy in a small rodent, Peromyscus polionotus Am Nat 117 665 675 10.1086/283751
-
(1981)
Am Nat
, vol.117
, pp. 665-675
-
-
Foltz, D.1
-
24
-
-
27644443333
-
Molecular identification of bacteria associated with bacterial vaginosis
-
DOI 10.1056/NEJMoa043802
-
D Fredricks T Fiedler J Marrazzo 2005 Molecular identification of bacteria associated with bacterial vaginosis New Engl J Med 353 1899 1911 16267321 10.1056/NEJMoa043802 1:CAS:528:DC%2BD2MXhtF2rsL%2FL (Pubitemid 41565955)
-
(2005)
New England Journal of Medicine
, vol.353
, Issue.18
, pp. 1899-1911
-
-
Fredricks, D.N.1
Fiedler, T.L.2
Marrazzo, J.M.3
-
25
-
-
0030431940
-
Effects of the parasite Eimeria arizonensis on survival of deer mice (Peromyscus maniculatus)
-
10.2307/2265712
-
C Fuller A Blaustein 1996 Effects of the parasite Eimeria arizonensis on survival of deer mice (Peromyscus maniculatus) Ecology 77 2196 2202 10.2307/2265712
-
(1996)
Ecology
, vol.77
, pp. 2196-2202
-
-
Fuller, C.1
Blaustein, A.2
-
27
-
-
0000803388
-
The population frequencies of species and the estimation of population parameters
-
I Good 1953 The population frequencies of species and the estimation of population parameters Biometrika 40 237 264
-
(1953)
Biometrika
, vol.40
, pp. 237-264
-
-
Good, I.1
-
28
-
-
0035857959
-
Probability of HIV-1 transmission per coital act in monogamous, heterosexual, HIV-1-discordant couples in Rakai, Uganda
-
DOI 10.1016/S0140-6736(00)04331-2
-
R Gray, et al. 2001 Probability of HIV-1 transmission per coital act in monogamous, heterosexual, HIV-1-discordant couples in Rakai, Uganda Lancet 357 1149 1153 11323041 10.1016/S0140-6736(00)04331-2 1:STN:280: DC%2BD3MzisFejug%3D%3D (Pubitemid 32378686)
-
(2001)
Lancet
, vol.357
, Issue.9263
, pp. 1149-1153
-
-
Gray, R.H.1
Wawer, M.J.2
Brookmeyer, R.3
Sewankambo, N.K.4
Serwadda, D.5
Wabwire-Mangen, F.6
Lutalo, T.7
Li, X.8
VanCott, T.9
Quinn, T.C.10
-
29
-
-
77954493978
-
Bacterial diversity of the digestive gland of Sydney rock oysters, Saccostrea glomerata infected with the paramyxean parasite, Marteilia sydneyi
-
20202017 1:CAS:528:DC%2BC3cXhtV2itLzL
-
TJ Green AC Barnes 2010 Bacterial diversity of the digestive gland of Sydney rock oysters, Saccostrea glomerata infected with the paramyxean parasite, Marteilia sydneyi J Appl Microbiol 109 613 622 20202017 1:CAS:528: DC%2BC3cXhtV2itLzL
-
(2010)
J Appl Microbiol
, vol.109
, pp. 613-622
-
-
Green, T.J.1
Barnes, A.C.2
-
30
-
-
0036606694
-
Sexual mixing patterns and sex-differentials in teenage exposure to HIV infection in rural Zimbabwe
-
DOI 10.1016/S0140-6736(02)08780-9
-
S Gregson, et al. 2002 Sexual mixing patterns and sex-differentials in teenage exposure to HIV infection in rural Zimbabwe Lancet 359 1896 1903 12057552 10.1016/S0140-6736(02)08780-9 (Pubitemid 34615768)
-
(2002)
Lancet
, vol.359
, Issue.9321
, pp. 1896-1903
-
-
Gregson, S.1
Nyamukapa, C.A.2
Garnett, G.P.3
Mason, P.R.4
Zhuwau, T.5
Carael, M.6
Chandiwana, S.K.7
Anderson, R.M.8
-
31
-
-
10344227692
-
Metagenomics: Application of genomics to uncultured microorganisms
-
DOI 10.1128/MMBR.68.4.669-685.2004
-
J Handelsman 2004 Metagenomics: application of genomics to uncultured microorganisms Microbiol Mol Biol Rev 68 669 685 15590779 10.1128/MMBR.68.4.669- 685.2004 1:CAS:528:DC%2BD2MXjvFSgsQ%3D%3D (Pubitemid 39628532)
-
(2004)
Microbiology and Molecular Biology Reviews
, vol.68
, Issue.4
, pp. 669-685
-
-
Handelsman, J.1
-
32
-
-
65249119418
-
The human intestinal microbiome: A new frontier of human biology
-
19147530 10.1093/dnares/dsn033 1:CAS:528:DC%2BD1MXitFyrsL8%3D
-
M Hattori TD Taylor 2009 The human intestinal microbiome: a new frontier of human biology DNA Res 16 1 12 19147530 10.1093/dnares/dsn033 1:CAS:528:DC%2BD1MXitFyrsL8%3D
-
(2009)
DNA Res
, vol.16
, pp. 1-12
-
-
Hattori, M.1
Taylor, T.D.2
-
33
-
-
77954254522
-
Improvement of the representation of bifidobacteria in fecal microbiota metagenomic libraries by application of the cpn60 universal primer cocktail
-
10.1128/AEM.01510-09 1:CAS:528:DC%2BC3cXptFOjtLY%3D
-
JE Hill, et al. 2010 Improvement of the representation of bifidobacteria in fecal microbiota metagenomic libraries by application of the cpn60 universal primer cocktail Appl Environ Microb 76 4550 4552 10.1128/AEM.01510-09 1:CAS:528:DC%2BC3cXptFOjtLY%3D
-
(2010)
Appl Environ Microb
, vol.76
, pp. 4550-4552
-
-
Hill, J.E.1
-
34
-
-
5044240973
-
Bellerophon: A program to detect chimeric sequences in multiple sequence alignments
-
DOI 10.1093/bioinformatics/bth226
-
T Huber G Faulkner P Hugenholtz 2004 Bellerophon: a program to detect chimeric sequences in multiple sequence alignments Bioinformatics 20 2317 2319 15073015 10.1093/bioinformatics/bth226 1:CAS:528:DC%2BD2cXnvVOrsbk%3D (Pubitemid 39341624)
-
(2004)
Bioinformatics
, vol.20
, Issue.14
, pp. 2317-2319
-
-
Huber, T.1
Faulkner, G.2
Hugenholtz, P.3
-
35
-
-
52949115612
-
Microbiology-metagenomics
-
18818648 10.1038/455481a 1:CAS:528:DC%2BD1cXhtFKhtLnL
-
P Hugenholtz GW Tyson 2008 Microbiology-metagenomics Nature 455 481 483 18818648 10.1038/455481a 1:CAS:528:DC%2BD1cXhtFKhtLnL
-
(2008)
Nature
, vol.455
, pp. 481-483
-
-
Hugenholtz, P.1
Tyson, G.W.2
-
36
-
-
0043131917
-
Bacteria in the reproductive tracts of Red-winged Blackbirds
-
G Hupton S Portocarrero M Newman D Westneat 2003 Bacteria in the reproductive tracts of red-winged blackbirds Condor 105 453 464 10.1650/7246 (Pubitemid 36967395)
-
(2003)
Condor
, vol.105
, Issue.3
, pp. 453-464
-
-
Hupton, G.1
Portocarrero, S.2
Newman, M.3
Westneat, D.F.4
-
37
-
-
33947431986
-
Species diversity and relative abundance of vaginal lactic acid bacteria from women in Uganda and Korea
-
DOI 10.1111/j.1365-2672.2006.03147.x
-
L Jin, et al. 2007 Species diversity and relative abundance of vaginal lactic acid bacteria from women in Uganda and Korea J Appl Microbiol 102 1107 1115 17381754 1:CAS:528:DC%2BD2sXltFKhtLk%3D (Pubitemid 46457472)
-
(2007)
Journal of Applied Microbiology
, vol.102
, Issue.4
, pp. 1107-1115
-
-
Jin, L.1
Tao, L.2
Pavlova, S.I.3
So, J.-S.4
Kiwanuka, N.5
Namukwaya, Z.6
Saberbein, B.A.7
Wawer, M.8
-
38
-
-
0028044948
-
Clostridium difficile colitis
-
DOI 10.1056/NEJM199401273300406
-
CP Kelly C Pothoulakis JT LaMont 1994 Clostridium difficile colitis N Engl J Med 330 257 262 8043060 10.1056/NEJM199401273300406 1:STN:280: DyaK2c%2FpsleksA%3D%3D (Pubitemid 24034138)
-
(1994)
New England Journal of Medicine
, vol.330
, Issue.4
, pp. 257-262
-
-
Kelly, C.P.1
Pothoulakis, C.2
Lamont, J.T.3
-
39
-
-
65249096027
-
Heterogeneity of vaginal microbial communities within individuals
-
19158255 10.1128/JCM.00854-08 1:CAS:528:DC%2BD1MXlvVamtL8%3D
-
TK Kim, et al. 2009 Heterogeneity of vaginal microbial communities within individuals J Clin Microbiol 47 1181 1189 19158255 10.1128/JCM.00854-08 1:CAS:528:DC%2BD1MXlvVamtL8%3D
-
(2009)
J Clin Microbiol
, vol.47
, pp. 1181-1189
-
-
Kim, T.K.1
-
40
-
-
0017467950
-
Monogamy in mammals
-
857268 10.1086/409721 1:STN:280:DyaE2s7ntlGltQ%3D%3D
-
D Kleiman 1977 Monogamy in mammals Q Rev Biol 52 39 69 857268 10.1086/409721 1:STN:280:DyaE2s7ntlGltQ%3D%3D
-
(1977)
Q Rev Biol
, vol.52
, pp. 39-69
-
-
Kleiman, D.1
-
41
-
-
0037334709
-
Gap length: An important factor in sexually transmitted disease transmission
-
DOI 10.1097/00007435-200303000-00009
-
J Kraut-Becher S Aral 2003 Gap length: an important factor in sexually transmitted disease transmission Sex Transm Dis 30 221 225 12616140 10.1097/00007435-200303000-00009 (Pubitemid 36297643)
-
(2003)
Sexually Transmitted Diseases
, vol.30
, Issue.3
, pp. 221-225
-
-
Kraut-Becher, J.R.1
Aral, S.O.2
-
42
-
-
77956396111
-
Bacterial communities of two ubiquitous great barrier reef corals reveals both site- and species-specificity of common bacterial associates
-
20454460 10.1371/journal.pone.0010401
-
ECE Kvennefors E Sampayo T Ridgway AC Barnes O Hoegh-Guldberg 2010 Bacterial communities of two ubiquitous great barrier reef corals reveals both site- and species-specificity of common bacterial associates PLoS ONE 5 e10401 20454460 10.1371/journal.pone.0010401
-
(2010)
PLoS ONE
, vol.5
, pp. 10401
-
-
Kvennefors, E.C.E.1
Sampayo, E.2
Ridgway, T.3
Barnes, A.C.4
Hoegh-Guldberg, O.5
-
43
-
-
29144464937
-
UniFrac: A new phylogenetic method for comparing microbial communities
-
DOI 10.1128/AEM.71.12.8228-8235.2005
-
C Lozupone R Knight 2005 UniFrac: a new phylogenetic method for comparing microbial communities Appl Environ Microb 71 8228 8235 10.1128/AEM.71.12.8228- 8235.2005 1:CAS:528:DC%2BD2MXhtlehtb7K (Pubitemid 41803949)
-
(2005)
Applied and Environmental Microbiology
, vol.71
, Issue.12
, pp. 8228-8235
-
-
Lozupone, C.1
Knight, R.2
-
44
-
-
0036123597
-
Measurement, prevalence, and correlates among urban 18-39-year-olds
-
L Manhart S Aral K Holmes B Foxman 2002 Sex partner concurrency- measurement, prevalence, and correlates among urban 18-39-year-olds Sex Transm Dis 29 133 143 11875374 10.1097/00007435-200203000-00003 (Pubitemid 34219626)
-
(2002)
Sexually Transmitted Diseases
, vol.29
, Issue.3
, pp. 133-143
-
-
Manhart, L.E.1
Aral, S.O.2
Holmes, K.K.3
Foxman, B.4
-
45
-
-
0036324293
-
Phylogenetic approaches for describing and comparing the diversity of microbial communities
-
DOI 10.1128/AEM.68.8.3673-3682.2002
-
A Martin 2002 Phylogenetic approaches for describing and comparing the diversity of microbial communities Appl Environ Microb 68 3673 3682 10.1128/AEM.68.8.3673-3682.2002 1:CAS:528:DC%2BD38XmtVaqtLY%3D (Pubitemid 34836673)
-
(2002)
Applied and Environmental Microbiology
, vol.68
, Issue.8
, pp. 3673-3682
-
-
Martin, A.P.1
-
46
-
-
0024284028
-
A simple salting out procedure for extracting DNA from human nucleated cells
-
3344216 10.1093/nar/16.3.1215 1:CAS:528:DyaL1cXhsVKlsrs%3D
-
S Miller D Dykes H Polesky 1988 A simple salting out procedure for extracting DNA from human nucleated cells Nucl Acids Res 16 1215 3344216 10.1093/nar/16.3.1215 1:CAS:528:DyaL1cXhsVKlsrs%3D
-
(1988)
Nucl Acids Res
, vol.16
, pp. 1215
-
-
Miller, S.1
Dykes, D.2
Polesky, H.3
-
48
-
-
28044465440
-
Intravaginal practices, bacterial vaginosis, and women's susceptibility to HIV infection: Epidemiological evidence and biological mechanisms
-
DOI 10.1016/S1473-3099(05)70298-X, PII S147330990570298X
-
L Myer L Kuhn ZA Stein TC Wright L Denny 2005 Intravaginal practices, bacterial vaginosis, and women's susceptibility to HIV infection: epidemiological evidence and biological mechanisms Lancet Infect Dis 5 786 794 16310150 10.1016/S1473-3099(05)70298-X (Pubitemid 41688983)
-
(2005)
Lancet Infectious Diseases
, vol.5
, Issue.12
, pp. 786-794
-
-
Myer, L.1
Kuhn, L.2
Stein, Z.A.3
Wright Jr., T.C.4
Denny, L.5
-
49
-
-
0030609749
-
Heterosexual transmission of human immunodeficiency virus (HIV) in Northern California: Results from a ten-year study
-
9270414 1:STN:280:DyaK2svhs1Cltg%3D%3D
-
N Padian S Shiboski S Glass E Vittinghoff 1997 Heterosexual transmission of human immunodeficiency virus (HIV) in Northern California: results from a ten-year study Am J Epidemiol 146 350 357 9270414 1:STN:280:DyaK2svhs1Cltg%3D%3D
-
(1997)
Am J Epidemiol
, vol.146
, pp. 350-357
-
-
Padian, N.1
Shiboski, S.2
Glass, S.3
Vittinghoff, E.4
-
50
-
-
0034992657
-
Bacterial diversity in human subgingival plaque
-
DOI 10.1128/JB.183.12.3770-3783.2001
-
B Paster, et al. 2001 Bacterial diversity in human subgingival plaque J Bacteriol 183 3770 3783 11371542 10.1128/JB.183.12.3770-3783.2001 1:CAS:528:DC%2BD3MXktlSguro%3D (Pubitemid 32510445)
-
(2001)
Journal of Bacteriology
, vol.183
, Issue.12
, pp. 3770-3783
-
-
Paster, B.J.1
Boches, S.K.2
Galvin, J.L.3
Ericson, R.E.4
Lau, C.N.5
Levanos, V.A.6
Sahasrabudhe, A.7
Dewhirst, F.E.8
-
51
-
-
0036377010
-
Cloacal microorganisms and mating systems of four Australian bird species
-
A Poiani J Gwozdz 2002 Cloacal microorganisms and mating systems of four Australian bird species Emu 102 291 296 10.1071/MU01055 (Pubitemid 34986743)
-
(2002)
Emu
, vol.102
, Issue.3
, pp. 291-296
-
-
Poiani, A.1
Gwozdz, J.2
-
53
-
-
0033573349
-
Chlamydia transmission: Concurrency, reproduction number, and the epidemic trajectory
-
10604776 1:STN:280:DC%2BD3c%2FmvVaktA%3D%3D
-
J Potterat, et al. 1999 Chlamydia transmission: concurrency, reproduction number, and the epidemic trajectory Am J Epidemiol 150 1331 1339 10604776 1:STN:280:DC%2BD3c%2FmvVaktA%3D%3D
-
(1999)
Am J Epidemiol
, vol.150
, pp. 1331-1339
-
-
Potterat, J.1
-
54
-
-
37549027613
-
SILVA: A comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB
-
17947321 10.1093/nar/gkm864 1:CAS:528:DC%2BD1cXhtFGmtg%3D%3D
-
E Pruesse, et al. 2007 SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB Nucl Acids Res 35 7188 7196 17947321 10.1093/nar/gkm864 1:CAS:528:DC%2BD1cXhtFGmtg%3D%3D
-
(2007)
Nucl Acids Res
, vol.35
, pp. 7188-7196
-
-
Pruesse, E.1
-
55
-
-
79952750340
-
Vaginal microbiome of reproductive-age women
-
20534435 10.1073/pnas.1002611107 1:CAS:528:DC%2BC3MXjvVCrs7g%3D
-
J Ravel, et al. 2011 Vaginal microbiome of reproductive-age women Proc Natl Acad Sci 108 Suppl 1 4680 4687 20534435 10.1073/pnas.1002611107 1:CAS:528:DC%2BC3MXjvVCrs7g%3D
-
(2011)
Proc Natl Acad Sci
, vol.108
, Issue.SUPPL. 1
, pp. 4680-4687
-
-
Ravel, J.1
-
56
-
-
0026267471
-
The monogamous mating system of Peromyscus californicus as revealed by DNA fingerprinting
-
10.1007/BF00166397
-
D Ribble 1991 The monogamous mating system of Peromyscus californicus as revealed by DNA fingerprinting Behav Ecol Sociobiol 29 161 166 10.1007/BF00166397
-
(1991)
Behav Ecol Sociobiol
, vol.29
, pp. 161-166
-
-
Ribble, D.1
-
57
-
-
0026498744
-
Dispersal in a monogamous rodent, Peromyscus californicus
-
10.2307/1940163
-
D Ribble 1992 Dispersal in a monogamous rodent, Peromyscus californicus Ecology 73 859 866 10.2307/1940163
-
(1992)
Ecology
, vol.73
, pp. 859-866
-
-
Ribble, D.1
-
58
-
-
0030316918
-
The mating system of northern populations of Peromyscus maniculatus as revealed by radiotelemetry and DNA fingerprinting
-
D Ribble J Millar 1996 The mating system of northern populations of Peromyscus maniculatus as revealed by radiotelemetry and DNA fingerprinting Ecoscience 3 423 428
-
(1996)
Ecoscience
, vol.3
, pp. 423-428
-
-
Ribble, D.1
Millar, J.2
-
59
-
-
77951684622
-
Baboon vaginal microbiota: An overlooked aspect of primate physiology
-
20095026 1:CAS:528:DC%2BC3cXot1Gmu7s%3D
-
AJ Rivera RM Stumpf B Wilson S Leigh AA Salyers 2010 Baboon vaginal microbiota: an overlooked aspect of primate physiology Am J Primatol 72 6 467 474 20095026 1:CAS:528:DC%2BC3cXot1Gmu7s%3D
-
(2010)
Am J Primatol
, vol.72
, Issue.6
, pp. 467-474
-
-
Rivera, A.J.1
Stumpf, R.M.2
Wilson, B.3
Leigh, S.4
Salyers, A.A.5
-
60
-
-
78650251753
-
Differences between the normal vaginal bacterial community of baboons and that of humans
-
20853395 10.1002/ajp.20851
-
AJ Rivera JA Frank, et al. 2010 Differences between the normal vaginal bacterial community of baboons and that of humans Am J Primatol 73 119 126 20853395 10.1002/ajp.20851
-
(2010)
Am J Primatol
, vol.73
, pp. 119-126
-
-
Rivera, A.J.1
Frank, J.A.2
-
61
-
-
40249113895
-
Evaluating different approaches that test whether microbial communities have the same structure
-
DOI 10.1038/ismej.2008.5, PII ISMEJ20085
-
PD Schloss 2008 Evaluating different approaches that test whether microbial communities have the same structure Isme J 2 265 275 18239608 10.1038/ismej.2008.5 (Pubitemid 351334275)
-
(2008)
ISME Journal
, vol.2
, Issue.3
, pp. 265-275
-
-
Schloss, P.D.1
-
62
-
-
72949107142
-
Introducing mothur: Open-source, platform-independent, community-supported software for describing and comparing microbial communities
-
10.1128/AEM.01541-09 1:CAS:528:DC%2BC3cXis1yltw%3D%3D
-
PD Schloss, et al. 2009 Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities Appl Environ Microb 75 7537 7541 10.1128/AEM.01541-09 1:CAS:528:DC%2BC3cXis1yltw%3D%3D
-
(2009)
Appl Environ Microb
, vol.75
, pp. 7537-7541
-
-
Schloss, P.D.1
-
63
-
-
43749112948
-
Chronic parasitic infection alters reproductive output in deer mice
-
10.1007/s00265-008-0563-y
-
LE Schwanz 2008 Chronic parasitic infection alters reproductive output in deer mice Behav Ecol Sociobiol 62 1351 1358 10.1007/s00265-008-0563-y
-
(2008)
Behav Ecol Sociobiol
, vol.62
, pp. 1351-1358
-
-
Schwanz, L.E.1
-
64
-
-
4444242774
-
Antagonistic activities of lactobacilli and bifidobacteria against microbial pathogens
-
DOI 10.1016/j.femsre.2004.01.003, PII S0168644504000142
-
AL Servin 2004 Antagonistic activities of lactobacilli and bifidobacteria against microbial pathogens FEMS Microbiol Rev 28 405 440 15374659 10.1016/j.femsre.2004.01.003 1:CAS:528:DC%2BD2cXnslGhsLs%3D (Pubitemid 39209464)
-
(2004)
FEMS Microbiology Reviews
, vol.28
, Issue.4
, pp. 405-440
-
-
Servin, A.L.1
-
65
-
-
84856043672
-
A mathematical theory of communication
-
C Shannon 1948 A mathematical theory of communication The Bell Sys Tech J 27 379 423
-
(1948)
The Bell Sys Tech J
, vol.27
, pp. 379-423
-
-
Shannon, C.1
-
66
-
-
20444382796
-
Parentage analysis of the canyon mouse (Peromyscus crinitus): Evidence for multiple paternity
-
DOI 10.1644/1545-1542(2005)86[531:PAOTCM]2.0.CO;2
-
Q Shurtliff D Pearse D Rogers 2005 Parentage analysis of the canyon mouse (Peromyscus crinitus): evidence for multiple paternity J Mammal 86 531 540 10.1644/1545-1542(2005)86[531:PAOTCM]2.0.CO;2 (Pubitemid 40802348)
-
(2005)
Journal of Mammalogy
, vol.86
, Issue.3
, pp. 531-540
-
-
Shurtliff, Q.R.1
Pearse, D.E.2
Rogers, D.S.3
-
67
-
-
79951899359
-
Guidelines of the American Society of Mammalogists for the use of wild mammals in research
-
10.1644/10-MAMM-F-355.1
-
RS Sikes WL Gannon 2011 Guidelines of the American Society of Mammalogists for the use of wild mammals in research J Mammal 92 235 253 10.1644/10-MAMM-F-355.1
-
(2011)
J Mammal
, vol.92
, pp. 235-253
-
-
Sikes, R.S.1
Gannon, W.L.2
-
68
-
-
33344464667
-
Measurement of diversity
-
E Simpson 1949 Measurement of diversity Nature 163 688-688
-
(1949)
Nature
, vol.163
, pp. 688-688
-
-
Simpson, E.1
-
69
-
-
0027138033
-
The diversification of South American murid rodents: Evidence from mitochondrial DNA sequence data for the akodontine tribe
-
DOI 10.1006/bijl.1993.1052
-
M Smith J Patton 1993 The diversification of South American murid rodents: evidence from mitochondrial DNA sequence data for the akodontine tribe Biol J Linn Soc 50 149 177 10.1111/j.1095-8312.1993.tb00924.x (Pubitemid 2022629)
-
(1993)
Biological Journal of the Linnean Society
, vol.50
, Issue.3
, pp. 149-177
-
-
Smith, M.F.1
Patton, J.L.2
-
70
-
-
0021595487
-
Nonparametric estimation of species richness
-
10.2307/2530750
-
E Smith G VanBelle 1984 Nonparametric estimation of species richness Biometrics 40 119 129 10.2307/2530750
-
(1984)
Biometrics
, vol.40
, pp. 119-129
-
-
Smith, E.1
Vanbelle, G.2
-
71
-
-
77149122114
-
Identification of rhesus macaque genital microbiota by 16S pyrosequencing shows similarities to human bacterial vaginosis: Implications for use as an animal model for HIV vaginal infection
-
20156101 10.1089/aid.2009.0166 1:CAS:528:DC%2BC3cXitVSqs7g%3D
-
GT Spear, et al. 2010 Identification of rhesus macaque genital microbiota by 16S pyrosequencing shows similarities to human bacterial vaginosis: implications for use as an animal model for HIV vaginal infection AIDS Res Hum Retroviruses 26 193 200 20156101 10.1089/aid.2009.0166 1:CAS:528: DC%2BC3cXitVSqs7g%3D
-
(2010)
AIDS Res Hum Retroviruses
, vol.26
, pp. 193-200
-
-
Spear, G.T.1
-
72
-
-
33750403801
-
RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
-
DOI 10.1093/bioinformatics/btl446
-
A Stamatakis 2006 RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models Bioinformatics 22 21 2688 2690 16928733 10.1093/bioinformatics/btl446 1:CAS:528:DC%2BD28XhtFKlsbfI (Pubitemid 44642609)
-
(2006)
Bioinformatics
, vol.22
, Issue.21
, pp. 2688-2690
-
-
Stamatakis, A.1
-
73
-
-
0037057683
-
Helicobacter pylori infection
-
12374879 10.1056/NEJMra020542 1:CAS:528:DC%2BD38XnslShsbo%3D
-
S Suerbaum P Michetti 2002 Helicobacter pylori infection N Engl J Med 347 1175 1186 12374879 10.1056/NEJMra020542 1:CAS:528:DC%2BD38XnslShsbo%3D
-
(2002)
N Engl J Med
, vol.347
, pp. 1175-1186
-
-
Suerbaum, S.1
Michetti, P.2
-
74
-
-
58749112734
-
A core gut microbiome in obese and lean twins
-
10.1038/nature07540
-
PJ Turnbaugh, et al. 2009 A core gut microbiome in obese and lean twins Nature 457 480-U7 10.1038/nature07540
-
(2009)
Nature
, vol.457
-
-
Turnbaugh, P.J.1
-
75
-
-
54549083155
-
Parasites prevent summer breeding in white-footed mice, Peromyscus leucopus
-
18724735 10.1890/07-1935.1
-
KJ Vandegrift TR Raffel PJ Hudson 2008 Parasites prevent summer breeding in white-footed mice, Peromyscus leucopus Ecology 89 2251 2258 18724735 10.1890/07-1935.1
-
(2008)
Ecology
, vol.89
, pp. 2251-2258
-
-
Vandegrift, K.J.1
Raffel, T.R.2
Hudson, P.J.3
-
76
-
-
70350527180
-
Conservative fragments in bacterial 16S rRNA genes and primer design for 16S ribosomal DNA amplicons in metagenomic studies
-
19816594 10.1371/journal.pone.0007401
-
Y Wang P-Y Qian 2009 Conservative fragments in bacterial 16S rRNA genes and primer design for 16S ribosomal DNA amplicons in metagenomic studies PLoS ONE 4 e7401 19816594 10.1371/journal.pone.0007401
-
(2009)
PLoS ONE
, vol.4
, pp. 7401
-
-
Wang, Y.1
Qian, P.-Y.2
-
77
-
-
20244368227
-
Rates of HIV-1 transmission per coital act, by stage of HIV-1 infection, in Rakai, Uganda
-
DOI 10.1086/429411
-
M Wawer, et al. 2005 Rates of HIV-1 transmission per coital act, by stage of HIV-1 infection, in Rakai, Uganda J Infect Dis 191 1403 1409 15809897 10.1086/429411 (Pubitemid 40563350)
-
(2005)
Journal of Infectious Diseases
, vol.191
, Issue.9
, pp. 1403-1409
-
-
Wawer, M.J.1
Gray, R.H.2
Sewankambo, N.K.3
Serwadda, D.4
Li, X.5
Laeyendecker, O.6
Kiwanuka, N.7
Kigozi, G.8
Kiddugavu, M.9
Lutalo, T.10
Nalugoda, F.11
Wabwire-Mangen, F.12
Meehan, M.P.13
Quinn, T.C.14
-
78
-
-
0036055706
-
Lack of parasite-mediated sexual selection in a ladybird/sexually transmitted disease system
-
10.1006/anbe.2001.1877
-
K Webberley G Hurst J Buszko M Majerus 2002 Lack of parasite-mediated sexual selection in a ladybird/sexually transmitted disease system Anim Behav 63 131 141 10.1006/anbe.2001.1877
-
(2002)
Anim Behav
, vol.63
, pp. 131-141
-
-
Webberley, K.1
Hurst, G.2
Buszko, J.3
Majerus, M.4
-
79
-
-
0023990202
-
Aspects of the epidemiology of Chlamydia psittaci infection in a population of koalas (Phascolarctos cinereus) in southeastern Queensland, Australia
-
1:STN:280:DyaL1c3jtVOitw%3D%3D
-
BJ Weigler, et al. 1988 Aspects of the epidemiology of Chlamydia psittaci infection in a population of koalas (Phascolarctos cinereus) in southeastern Queensland, Australia J Wildlife Dis 24 282 291 1:STN:280:DyaL1c3jtVOitw%3D%3D
-
(1988)
J Wildlife Dis
, vol.24
, pp. 282-291
-
-
Weigler, B.J.1
-
80
-
-
0026067797
-
16S ribosomal DNA amplification for phylogenetic study
-
1987160 1:CAS:528:DyaK3MXhsl2lurY%3D
-
W Weisburg S Barns D Pelletier D Lane 1991 16S ribosomal DNA amplification for phylogenetic study J Bacteriol 173 697 703 1987160 1:CAS:528:DyaK3MXhsl2lurY%3D
-
(1991)
J Bacteriol
, vol.173
, pp. 697-703
-
-
Weisburg, W.1
Barns, S.2
Pelletier, D.3
Lane, D.4
-
81
-
-
80053966245
-
The bacterial microbiota in the ceca of Capercaillie (Tetrao urogallus) differs between wild and captive birds
-
DOI: 10.1016/j.syapm.2011.06.003
-
Wienemann T et al (2011) The bacterial microbiota in the ceca of Capercaillie (Tetrao urogallus) differs between wild and captive birds. Syst Appl Microbiol doi: 10.1016/j.syapm.2011.06.003
-
(2011)
Syst Appl Microbiol
-
-
Wienemann, T.1
-
82
-
-
34249739205
-
Bacterial flora of the female genital tract: function and immune regulation
-
DOI 10.1016/j.bpobgyn.2006.12.004, PII S1521693406001623, Subclinical Infections and Perinatal Outcomes
-
SS Witkin IM Linhares P Giraldo 2007 Bacterial flora of the female genital tract: function and immune regulation Best Pract Res Cl Ob 21 347 354 10.1016/j.bpobgyn.2006.12.004 (Pubitemid 46825481)
-
(2007)
Best Practice and Research in Clinical Obstetrics and Gynaecology
, vol.21
, Issue.3
, pp. 347-354
-
-
Witkin, S.S.1
Linhares, I.M.2
Giraldo, P.3
-
83
-
-
52149085893
-
The All-Species Living Tree project: A 16S rRNA-based phylogenetic tree of all sequenced type strains
-
18692976 10.1016/j.syapm.2008.07.001 1:CAS:528:DC%2BD1cXhsVKntrfK
-
P Yarza, et al. 2008 The All-Species Living Tree project: a 16S rRNA-based phylogenetic tree of all sequenced type strains Syst Appl Microbiol 31 241 250 18692976 10.1016/j.syapm.2008.07.001 1:CAS:528:DC%2BD1cXhsVKntrfK
-
(2008)
Syst Appl Microbiol
, vol.31
, pp. 241-250
-
-
Yarza, P.1
-
84
-
-
78650968341
-
Normal bacterial flora from vaginas of Criollo Limonero cows
-
21082249 10.1007/s11250-010-9701-4
-
S Zambrano-Nava J Boscán-Ocando J Nava 2010 Normal bacterial flora from vaginas of Criollo Limonero cows Trop Anim Health Prod 43 291 294 21082249 10.1007/s11250-010-9701-4
-
(2010)
Trop Anim Health Prod
, vol.43
, pp. 291-294
-
-
Zambrano-Nava, S.1
Boscán-Ocando, J.2
Nava, J.3
-
85
-
-
34249945020
-
Differences in the composition of vaginal microbial communities found in healthy Caucasian and black women
-
DOI 10.1038/ismej.2007.12, PII ISMEJ200712
-
X Zhou, et al. 2007 Differences in the composition of vaginal microbial communities found in healthy Caucasian and black women Isme J 1 121 133 18043622 10.1038/ismej.2007.12 1:CAS:528:DC%2BD1cXjsVaqsQ%3D%3D (Pubitemid 46878155)
-
(2007)
ISME Journal
, vol.1
, Issue.2
, pp. 121-133
-
-
Zhou, X.1
Brown, C.J.2
Abdo, Z.3
Davis, C.C.4
Hansmann, M.A.5
Joyce, P.6
Foster, J.A.7
Forney, L.J.8
|