-
1
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul, S. F., Madden, T. L., Schäffer, A. A., Zhang, J., Zhang, Z., Miller, W. & Lipman, D. J. (1997). Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25, 3389-3402.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schäffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
3
-
-
0001017849
-
Simple rapid methods of cell wall analysis as an aid in the identification of aerobic coryneform bacteria
-
Edited by M. Goodfellow & D. E. Minnikin. London: Academic Press
-
Bousfield, I. J., Keddie, R. M., Dando, T. R. & Shaw, S. (1985). Simple rapid methods of cell wall analysis as an aid in the identification of aerobic coryneform bacteria. In Chemical Methods in Bacterial Systematics (Society for Applied Bacteriology Technical Series vol. 20), pp. 221-236. Edited by M. Goodfellow & D. E. Minnikin. London: Academic Press.
-
(1985)
Chemical Methods In Bacterial Systematics (Society For Applied Bacteriology Technical Series
, vol.20
, pp. 221-236
-
-
Bousfield, I.J.1
Keddie, R.M.2
Dando, T.R.3
Shaw, S.4
-
4
-
-
0032951999
-
Rapid separation and identification of phosphatidylethanolamine molecular species
-
Brouwers, J. F., Vernooij, E. A., Tielens, A. G. & van Golde, L. M. (1999). Rapid separation and identification of phosphatidylethanolamine molecular species. J Lipid Res 40, 164-169.
-
(1999)
J Lipid Res
, vol.40
, pp. 164-169
-
-
Brouwers, J.F.1
Vernooij, E.A.2
Tielens, A.G.3
van Golde, L.M.4
-
5
-
-
70350491075
-
Actinopolymorpha alba sp. nov., isolated from a rhizosphere soil
-
Cao, Y. R., Jiang, Y., Wu, J. Y., Xu, L. H. & Jiang, C. L. (2009). Actinopolymorpha alba sp. nov., isolated from a rhizosphere soil. Int J Syst Evol Microbiol 59, 2200-2203.
-
(2009)
Int J Syst Evol Microbiol
, vol.59
, pp. 2200-2203
-
-
Cao, Y.R.1
Jiang, Y.2
Wu, J.Y.3
Xu, L.H.4
Jiang, C.L.5
-
6
-
-
0017682064
-
Distribution of menaquinones in actinomycetes and corynebacteria
-
Collins, M. D., Pirouz, T., Goodfellow, M. & Minnikin, D. E. (1977). Distribution of menaquinones in actinomycetes and corynebacteria. J Gen Microbiol 100, 221-230.
-
(1977)
J Gen Microbiol
, vol.100
, pp. 221-230
-
-
Collins, M.D.1
Pirouz, T.2
Goodfellow, M.3
Minnikin, D.E.4
-
7
-
-
0024578977
-
Transfer of Pimelobacter tumescens to Terrabacter gen. nov. as Terrabacter tumescens comb. nov. and of Pimelobacter jensenii to Nocardioides as Nocardioides jensenii comb. nov
-
Collins, M. D., Dorsch, M. & Stackebrandt, E. (1989). Transfer of Pimelobacter tumescens to Terrabacter gen. nov. as Terrabacter tumescens comb. nov. and of Pimelobacter jensenii to Nocardioides as Nocardioides jensenii comb. nov. Int J Syst Bacteriol 39, 1-6.
-
(1989)
Int J Syst Bacteriol
, vol.39
, pp. 1-6
-
-
Collins, M.D.1
Dorsch, M.2
Stackebrandt, E.3
-
8
-
-
1642399010
-
Analysis of the endophytic actinobacterial population in the roots of wheat (Triticum aestivum L.) by terminal restriction fragment length polymorphism and sequencing of 16S rRNA clones
-
Conn, V. M. & Franco, C. M. M. (2004). Analysis of the endophytic actinobacterial population in the roots of wheat (Triticum aestivum L.) by terminal restriction fragment length polymorphism and sequencing of 16S rRNA clones. Appl Environ Microbiol 70, 1787-1794.
-
(2004)
Appl Environ Microbiol
, vol.70
, pp. 1787-1794
-
-
Conn, V.M.1
Franco, C.M.M.2
-
9
-
-
0141704522
-
Isolation and identification of actinobacteria from surface-sterilized wheat roots
-
Coombs, J. T. & Franco, C. M. M. (2003). Isolation and identification of actinobacteria from surface-sterilized wheat roots. Appl Environ Microbiol 69, 5603-5608.
-
(2003)
Appl Environ Microbiol
, vol.69
, pp. 5603-5608
-
-
Coombs, J.T.1
Franco, C.M.M.2
-
10
-
-
0032102062
-
Structural determination and quantitative analysis of bacterial phospholipids using liquid chromatography/ electrospray ionization/mass spectrometry
-
Fang, J. & Barcelona, M. J. (1998). Structural determination and quantitative analysis of bacterial phospholipids using liquid chromatography/ electrospray ionization/mass spectrometry. J Microbiol Methods 33, 23-35.
-
(1998)
J Microbiol Methods
, vol.33
, pp. 23-35
-
-
Fang, J.1
Barcelona, M.J.2
-
11
-
-
0000461280
-
Confidence limits on phylogenies: An approach using the bootstrap
-
Felsenstein, J. (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783-791.
-
(1985)
Evolution
, vol.39
, pp. 783-791
-
-
Felsenstein, J.1
-
12
-
-
0015949126
-
Nocardia coeliaca, Nocardia autotrophica, and the nocardin strain
-
Gordon, R. E., Barnett, D. A., Handerhan, J. E. & Pang, C. H. (1974). Nocardia coeliaca, Nocardia autotrophica, and the nocardin strain. Int J Syst Bacteriol 24, 54-63.
-
(1974)
Int J Syst Bacteriol
, vol.24
, pp. 54-63
-
-
Gordon, R.E.1
Barnett, D.A.2
Handerhan, J.E.3
Pang, C.H.4
-
13
-
-
0021077093
-
A rapid analysis for chemical grouping of aerobic actinomycetes
-
Hasegawa, T., Takisawa, M. & Tanida, S. (1983). A rapid analysis for chemical grouping of aerobic actinomycetes. J Gen Appl Microbiol 29, 319-322.
-
(1983)
J Gen Appl Microbiol
, vol.29
, pp. 319-322
-
-
Hasegawa, T.1
Takisawa, M.2
Tanida, S.3
-
14
-
-
0024451276
-
Thermonema lapsum gen. nov., sp. nov., a thermophilic gliding bacterium
-
Hudson, J. A., Schofield, K. M., Morgan, H. W. & Daniel, R. M. (1989). Thermonema lapsum gen. nov., sp. nov., a thermophilic gliding bacterium. Int J Syst Bacteriol 39, 485-487.
-
(1989)
Int J Syst Bacteriol
, vol.39
, pp. 485-487
-
-
Hudson, J.A.1
Schofield, K.M.2
Morgan, H.W.3
Daniel, R.M.4
-
15
-
-
0019296687
-
A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
-
Kimura, M. (1980). A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16, 111-120.
-
(1980)
J Mol Evol
, vol.16
, pp. 111-120
-
-
Kimura, M.1
-
16
-
-
84963036271
-
Quantitative phyletics and the evolution of anurans
-
Kluge, A. G. & Farris, F. S. (1969). Quantitative phyletics and the evolution of anurans. Syst Zool 18, 1-32.
-
(1969)
Syst Zool
, vol.18
, pp. 1-32
-
-
Kluge, A.G.1
Farris, F.S.2
-
18
-
-
0015844055
-
Numerical taxonomy of Nocardia
-
Kurup, P. V. & Schmitt, J. A. (1973). Numerical taxonomy of Nocardia. Can J Microbiol 19, 1035-1048.
-
(1973)
Can J Microbiol
, vol.19
, pp. 1035-1048
-
-
Kurup, P.V.1
Schmitt, J.A.2
-
19
-
-
3042651466
-
Bacterial phospholipid molecular species analysis by ion-pair reversed-phase HPLC/ESI/MS
-
Mazzella, N., Molinet, J., Syakti, A. D., Dodi, A., Doumenq, P., Artaud, J. & Bertrand, J. C. (2004). Bacterial phospholipid molecular species analysis by ion-pair reversed-phase HPLC/ESI/MS. J Lipid Res 45, 1355-1363.
-
(2004)
J Lipid Res
, vol.45
, pp. 1355-1363
-
-
Mazzella, N.1
Molinet, J.2
Syakti, A.D.3
Dodi, A.4
Doumenq, P.5
Artaud, J.6
Bertrand, J.C.7
-
20
-
-
0000198211
-
Precise measurement of the G+C content of deoxyribonucleic acid by high performance liquid chromatography
-
Mesbah, M., Premachandran, U. & Whitman, W. B. (1989). Precise measurement of the G+C content of deoxyribonucleic acid by high performance liquid chromatography. Int J Syst Bacteriol 39, 159-167.
-
(1989)
Int J Syst Bacteriol
, vol.39
, pp. 159-167
-
-
Mesbah, M.1
Premachandran, U.2
Whitman, W.B.3
-
21
-
-
0025870605
-
Description of the erythromycin-producing bacterium Arthrobacter sp. strain NRRL B-3381 as Aeromicrobium erythreum gen. nov., sp. nov
-
Miller, E. S., Woese, C. R. & Brenner, S. (1991). Description of the erythromycin-producing bacterium Arthrobacter sp. strain NRRL B-3381 as Aeromicrobium erythreum gen. nov., sp. nov. Int J Syst Bacteriol 41, 363-368.
-
(1991)
Int J Syst Bacteriol
, vol.41
, pp. 363-368
-
-
Miller, E.S.1
Woese, C.R.2
Brenner, S.3
-
22
-
-
0016684892
-
Differentiation of Mycobacterium, Nocardia, and related taxa by thin-layer chromatographic analysis of whole-organism methanolysates
-
Minnikin, D. E., Alshamaony, L. & Goodfellow, M. (1975). Differentiation of Mycobacterium, Nocardia, and related taxa by thin-layer chromatographic analysis of whole-organism methanolysates. J Gen Microbiol 88, 200-204.
-
(1975)
J Gen Microbiol
, vol.88
, pp. 200-204
-
-
Minnikin, D.E.1
Alshamaony, L.2
Goodfellow, M.3
-
23
-
-
0018834020
-
Thin layer chromatography of methanolysates of mycolic acid containing bacteria
-
Minnikin, D. E., Hutchinson, I. G., Caldicott, A. B. & Goodfellow, M. (1980). Thin layer chromatography of methanolysates of mycolic acid containing bacteria. J Chromatogr A 188, 221-233.
-
(1980)
J Chromatogr A
, vol.188
, pp. 221-233
-
-
Minnikin, D.E.1
Hutchinson, I.G.2
Caldicott, A.B.3
Goodfellow, M.4
-
24
-
-
0021182575
-
An integrated procedure for the extraction of bacterial isoprenoid quinones and polar lipids
-
Minnikin, D. E., O'Donnell, A. G., Goodfellow, M., Alderson, G., Athalye, M., Schaal, A. & Parlett, J. H. (1984). An integrated procedure for the extraction of bacterial isoprenoid quinones and polar lipids. J Microbiol Methods 2, 233-241.
-
(1984)
J Microbiol Methods
, vol.2
, pp. 233-241
-
-
Minnikin, D.E.1
O'Donnell, A.G.2
Goodfellow, M.3
Alderson, G.4
Athalye, M.5
Schaal, A.6
Parlett, J.H.7
-
25
-
-
0005395275
-
Nocardioidaceae fam. nov., a new family of the order Actinomycetales Buchanan 1917
-
Nesterenko, O. A., Kvasnikov, E. I. & Nogina, T. M. (1985). Nocardioidaceae fam. nov., a new family of the order Actinomycetales Buchanan 1917. Mikrobiol Zh 47, 3-12.
-
(1985)
Mikrobiol Zh
, vol.47
, pp. 3-12
-
-
Nesterenko, O.A.1
Kvasnikov, E.I.2
Nogina, T.M.3
-
26
-
-
0032900531
-
Classification of 'Nocardioides fulvus' IFO 14399 and Nocardioides sp. ATCC 39419 in Kribbella gen. nov., as Kribbella flavida sp. nov. and Kribbella sandramycini sp. nov
-
Park, Y. H., Yoon, J. H., Shin, Y. K., Suzuki, K., Kudo, T., Seino, A., Kim, H. J., Lee, J. S. & Lee, S. T. (1999). Classification of 'Nocardioides fulvus' IFO 14399 and Nocardioides sp. ATCC 39419 in Kribbella gen. nov., as Kribbella flavida sp. nov. and Kribbella sandramycini sp. nov. Int J Syst Bacteriol 49, 743-752.
-
(1999)
Int J Syst Bacteriol
, vol.49
, pp. 743-752
-
-
Park, Y.H.1
Yoon, J.H.2
Shin, Y.K.3
Suzuki, K.4
Kudo, T.5
Seino, A.6
Kim, H.J.7
Lee, J.S.8
Lee, S.T.9
-
27
-
-
0017235134
-
Nocardioides, a new genus of the order Actinomycetales
-
Prauser, H. (1976). Nocardioides, a new genus of the order Actinomycetales. Int J Syst Bacteriol 26, 58-65.
-
(1976)
Int J Syst Bacteriol
, vol.26
, pp. 58-65
-
-
Prauser, H.1
-
28
-
-
0023375195
-
The neighbor-joining method: A new method for reconstructing phylogenetic trees
-
Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
-
(1987)
Mol Biol Evol
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
30
-
-
3242782680
-
Liquid serial dilution is inferior to solid media for isolation of cultures representative of the phylum-level diversity of soil bacteria
-
Schoenborn, L., Yates, P. S., Grinton, B. E., Hugenholtz, P. & Janssen, P. H. (2004). Liquid serial dilution is inferior to solid media for isolation of cultures representative of the phylum-level diversity of soil bacteria. Appl Environ Microbiol 70, 4363-4366.
-
(2004)
Appl Environ Microbiol
, vol.70
, pp. 4363-4366
-
-
Schoenborn, L.1
Yates, P.S.2
Grinton, B.E.3
Hugenholtz, P.4
Janssen, P.H.5
-
31
-
-
0001023407
-
Methods for characterization of Streptomyces species
-
Shirling, E. B. & Gottlieb, D. (1966). Methods for characterization of Streptomyces species. Int J Syst Bacteriol 16, 313-340.
-
(1966)
Int J Syst Bacteriol
, vol.16
, pp. 313-340
-
-
Shirling, E.B.1
Gottlieb, D.2
-
32
-
-
16844377908
-
Jiangella gansuensis gen. nov., sp. nov., a novel actinomycete from a desert soil in north-west China
-
Song, L., Li, W. J., Wang, Q. L., Chen, G. Z., Zhang, Y. S. & Xu, L. H. (2005). Jiangella gansuensis gen. nov., sp. nov., a novel actinomycete from a desert soil in north-west China. Int J Syst Evol Microbiol 55, 881-884.
-
(2005)
Int J Syst Evol Microbiol
, vol.55
, pp. 881-884
-
-
Song, L.1
Li, W.J.2
Wang, Q.L.3
Chen, G.Z.4
Zhang, Y.S.5
Xu, L.H.6
-
33
-
-
0028028182
-
Taxonomic note: A place for DNA-DNA reassociation and 16s rRNA sequence analysis in the present species definition in bacteriology
-
Stackebrandt, E. & Goebel, B. M. (1994). Taxonomic note: A place for DNA-DNA reassociation and 16s rRNA sequence analysis in the present species definition in bacteriology. Int J Syst Bacteriol 44, 846-849.
-
(1994)
Int J Syst Bacteriol
, vol.44
, pp. 846-849
-
-
Stackebrandt, E.1
Goebel, B.M.2
-
34
-
-
0020509401
-
Pimelobacter gen. nov., a new genus of coryneform bacteria with LL-diaminopimelic acid in the cell wall
-
Suzuki, S. & Komagata, K. (1983). Pimelobacter gen. nov., a new genus of coryneform bacteria with LL-diaminopimelic acid in the cell wall. J Gen Appl Microbiol 29, 59-71.
-
(1983)
J Gen Appl Microbiol
, vol.29
, pp. 59-71
-
-
Suzuki, S.1
Komagata, K.2
-
35
-
-
34547781750
-
MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0
-
Tamura, K., Dudley, J., Nei, M. & Kumar, S. (2007). MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol Biol Evol 24, 1596-1599.
-
(2007)
Mol Biol Evol
, vol.24
, pp. 1596-1599
-
-
Tamura, K.1
Dudley, J.2
Nei, M.3
Kumar, S.4
-
36
-
-
0031574072
-
The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
-
Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F. & Higgins, D. G. (1997). The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25, 4876-4882.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
-
37
-
-
0031021812
-
Intra-and intergenic relationships of various actinomycete strains based on the acyl types of the muramyl residue in cell wall peptidoglycans examined in a glycolate test
-
Uchida, K. & Seino, A. (1997). Intra-and intergenic relationships of various actinomycete strains based on the acyl types of the muramyl residue in cell wall peptidoglycans examined in a glycolate test. Int J Syst Bacteriol 47, 182-190.
-
(1997)
Int J Syst Bacteriol
, vol.47
, pp. 182-190
-
-
Uchida, K.1
Seino, A.2
-
38
-
-
0034105465
-
Marmoricola aurantiacus gen. nov., sp. nov., a coccoid member of the family Nocardioidaceae isolated from a marble statue
-
Urzì, C., Salamone, P., Schumann, P. & Stackebrandt, E. (2000). Marmoricola aurantiacus gen. nov., sp. nov., a coccoid member of the family Nocardioidaceae isolated from a marble statue. Int J Syst Evol Microbiol 50, 529-536.
-
(2000)
Int J Syst Evol Microbiol
, vol.50
, pp. 529-536
-
-
Urzì, C.1
Salamone, P.2
Schumann, P.3
Stackebrandt, E.4
-
39
-
-
0035068656
-
Actinopolymorpha singaporensis gen. nov., sp. nov., a novel actinomycete from the tropical rainforest of Singapore
-
Wang, Y. M., Zhang, Z. S., Xu, X. L., Ruan, J. S. & Wang, Y. (2001). Actinopolymorpha singaporensis gen. nov., sp. nov., a novel actinomycete from the tropical rainforest of Singapore. Int J Syst Evol Microbiol 51, 467-473.
-
(2001)
Int J Syst Evol Microbiol
, vol.51
, pp. 467-473
-
-
Wang, Y.M.1
Zhang, Z.S.2
Xu, X.L.3
Ruan, J.S.4
Wang, Y.5
-
40
-
-
55849096217
-
Actinopolymorpha rutila sp. nov., isolated from a forest soil
-
Wang, Y. X., Zhang, Y. Q., Xu, L. H. & Li, W. J. (2008). Actinopolymorpha rutila sp. nov., isolated from a forest soil. Int J Syst Evol Microbiol 58, 2443-2446.
-
(2008)
Int J Syst Evol Microbiol
, vol.58
, pp. 2443-2446
-
-
Wang, Y.X.1
Zhang, Y.Q.2
Xu, L.H.3
Li, W.J.4
-
41
-
-
76849095359
-
Actinopolymorpha cephalotaxi sp. nov., a novel actinomycete isolated from rhizosphere soil of the plant Cephalotaxus fortunei
-
Yuan, L. J., Zhang, Y. Q., Yu, L. Y., Sun, C. H., Wei, Y. Z., Liu, H. Y., Li, W. J. & Zhang, Y. Q. (2010). Actinopolymorpha cephalotaxi sp. nov., a novel actinomycete isolated from rhizosphere soil of the plant Cephalotaxus fortunei. Int J Syst Evol Microbiol 60, 51-54.
-
(2010)
Int J Syst Evol Microbiol
, vol.60
, pp. 51-54
-
-
Yuan, L.J.1
Zhang, Y.Q.2
Yu, L.Y.3
Sun, C.H.4
Wei, Y.Z.5
Liu, H.Y.6
Li, W.J.7
Zhang, Y.Q.8
-
42
-
-
67651165968
-
An update of the structure and 16S rRNA gene sequence-based definition of higher ranks of the class Actinobacteria, with the proposal of two new suborders and four new families and emended descriptions of the existing higher taxa
-
Zhi, X. Y., Li, W. J. & Stackebrandt, E. (2009). An update of the structure and 16S rRNA gene sequence-based definition of higher ranks of the class Actinobacteria, with the proposal of two new suborders and four new families and emended descriptions of the existing higher taxa. Int J Syst Evol Microbiol 59, 589-608.
-
(2009)
Int J Syst Evol Microbiol
, vol.59
, pp. 589-608
-
-
Zhi, X.Y.1
Li, W.J.2
Stackebrandt, E.3
|