메뉴 건너뛰기




Volumn 156, Issue 3, 2011, Pages 227-235

Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing

Author keywords

CDNA; Chinese hamster ovary cell; N Glycosylation pathway; Next generation sequencing

Indexed keywords

ANNOTATED GENES; ASSEMBLY APPROACH; CARBOHYDRATE METABOLISM; CDNA; CDNA LIBRARIES; CDNA SEQUENCE; CELL LINES; CHINESE HAMSTER OVARY CELLS; CHO CELL; CONTIGS; DATA SETS; DIVERSE CULTURES; LIFE-SCIENCES; METABOLIC PATHWAYS; MUS MUSCULUS; N-GLYCOSYLATION; NEXT-GENERATION SEQUENCING; PYROSEQUENCING; SEQUENCE LENGTHS; TRANSCRIPTOMES;

EID: 80054106553     PISSN: 01681656     EISSN: 18734863     Source Type: Journal    
DOI: 10.1016/j.jbiotec.2011.09.014     Document Type: Article
Times cited : (82)

References (39)
  • 2
    • 70350523886 scopus 로고    scopus 로고
    • Using microarray technology to select housekeeping genes in Chinese hamster ovary cells
    • Bahr S.M., Borgschulte T., Kayser K.J., Lin N. Using microarray technology to select housekeeping genes in Chinese hamster ovary cells. Biotechnol. Bioeng. 2009, 104:1041-1046.
    • (2009) Biotechnol. Bioeng. , vol.104 , pp. 1041-1046
    • Bahr, S.M.1    Borgschulte, T.2    Kayser, K.J.3    Lin, N.4
  • 3
    • 61649088083 scopus 로고    scopus 로고
    • The Sequence Analysis and Management System-SAMS-2.0: data management and sequence analysis adapted to changing requirements from traditional sanger sequencing to ultrafast sequencing technologies
    • Bekel T., Henckel K., Küster H., Meyer F., Mittard Runte V., Neuweger H., Paarmann D., Rupp O., Zakrzewski M., Pühler A., Stoye J., Goesmann A. The Sequence Analysis and Management System-SAMS-2.0: data management and sequence analysis adapted to changing requirements from traditional sanger sequencing to ultrafast sequencing technologies. J. Biotechnol. 2009, 140:3-12.
    • (2009) J. Biotechnol. , vol.140 , pp. 3-12
    • Bekel, T.1    Henckel, K.2    Küster, H.3    Meyer, F.4    Mittard Runte, V.5    Neuweger, H.6    Paarmann, D.7    Rupp, O.8    Zakrzewski, M.9    Pühler, A.10    Stoye, J.11    Goesmann, A.12
  • 7
    • 0022639709 scopus 로고
    • Mechanism of galactosylation in the Golgi apparatus. A Chinese hamster ovary cell mutant deficient in translocation of UDP-galactose across Golgi vesicle membranes
    • Deutscher S.L., Hirschberg C.B. Mechanism of galactosylation in the Golgi apparatus. A Chinese hamster ovary cell mutant deficient in translocation of UDP-galactose across Golgi vesicle membranes. J. Biol. Chem. 1986, 261:96-100.
    • (1986) J. Biol. Chem. , vol.261 , pp. 96-100
    • Deutscher, S.L.1    Hirschberg, C.B.2
  • 8
    • 34250307966 scopus 로고    scopus 로고
    • Initial identification of low temperature and culture stage induction of miRNA expression in suspension CHO-K1 cells
    • Gammell P., Barron N., Kumar N., Clynes M. Initial identification of low temperature and culture stage induction of miRNA expression in suspension CHO-K1 cells. J. Biotechnol. 2007, 130:213-218.
    • (2007) J. Biotechnol. , vol.130 , pp. 213-218
    • Gammell, P.1    Barron, N.2    Kumar, N.3    Clynes, M.4
  • 11
    • 77949266037 scopus 로고    scopus 로고
    • Carbohydrate analysis throughout the development of a protein therapeutic
    • Higgins E. Carbohydrate analysis throughout the development of a protein therapeutic. Glycoconj. J. 2010, 27:211-225.
    • (2010) Glycoconj. J. , vol.27 , pp. 211-225
    • Higgins, E.1
  • 12
    • 84855911802 scopus 로고    scopus 로고
    • IMARCGroup, Global Biopharmaceutical Market Report (2010-2015). IMARC Group
    • IMARCGroup, 2010. Global Biopharmaceutical Market Report (2010-2015). IMARC Group. http://www.imarcgroup.com/.
    • (2010)
  • 14
    • 80054095280 scopus 로고    scopus 로고
    • Recombinant protein therapeutics from CHO cells-20 years and counting
    • Jayapal K., Wlaschin F., Hu W., Yap M. Recombinant protein therapeutics from CHO cells-20 years and counting. DNA Repair 2007, 4:0-47.
    • (2007) DNA Repair , vol.4 , pp. 0-47
    • Jayapal, K.1    Wlaschin, F.2    Hu, W.3    Yap, M.4
  • 15
    • 0029837484 scopus 로고    scopus 로고
    • Getting the glycosylation right: implications for the biotechnology industry
    • Jenkins N., Parekh R.B., James D.C. Getting the glycosylation right: implications for the biotechnology industry. Nat. Biotechnol. 1996, 14:975-981.
    • (1996) Nat. Biotechnol. , vol.14 , pp. 975-981
    • Jenkins, N.1    Parekh, R.B.2    James, D.C.3
  • 18
    • 70349648072 scopus 로고    scopus 로고
    • The effect of cell concentration on alpha 2,3-sialyltransferase activity in attachment culture of a human erythropoietin-producing Chinese hamster ovary cell line
    • Kim H.J., Kim H.J. The effect of cell concentration on alpha 2,3-sialyltransferase activity in attachment culture of a human erythropoietin-producing Chinese hamster ovary cell line. Biotechnol. Bioprocess Eng. 2009, 14:406-413.
    • (2009) Biotechnol. Bioprocess Eng. , vol.14 , pp. 406-413
    • Kim, H.J.1    Kim, H.J.2
  • 19
    • 23444439817 scopus 로고    scopus 로고
    • Using process diagrams for the graphical representation of biological networks
    • Kitano H., Funahashi A., Matsuoka Y., Oda K. Using process diagrams for the graphical representation of biological networks. Nat. Biotechnol. 2005, 23:961-966.
    • (2005) Nat. Biotechnol. , vol.23 , pp. 961-966
    • Kitano, H.1    Funahashi, A.2    Matsuoka, Y.3    Oda, K.4
  • 21
    • 34247526431 scopus 로고    scopus 로고
    • Protein-free transfection of CHO host cells with an IgG-fusion protein: selection and characterization of stable high producers and comparison to conventionally transfected clones
    • Lattenmayer C., Loeschel M., Schriebl K., Steinfellner W., Sterovsky T., Trummer E., Vorauer-Uhl K., Müller D., Katinger H., Kunert R. Protein-free transfection of CHO host cells with an IgG-fusion protein: selection and characterization of stable high producers and comparison to conventionally transfected clones. Biotechnol. Bioeng. 2007, 96:1118-1126.
    • (2007) Biotechnol. Bioeng. , vol.96 , pp. 1118-1126
    • Lattenmayer, C.1    Loeschel, M.2    Schriebl, K.3    Steinfellner, W.4    Sterovsky, T.5    Trummer, E.6    Vorauer-Uhl, K.7    Müller, D.8    Katinger, H.9    Kunert, R.10
  • 23
    • 33749435598 scopus 로고    scopus 로고
    • RNAi suppression of Bax and Bak enhances viability in fed-batch cultures of CHO cells
    • Lim S.F., Chuan K.H., Liu S., Loh S.O., Chung B.Y., Ong C.C., Song Z. RNAi suppression of Bax and Bak enhances viability in fed-batch cultures of CHO cells. Metab. Eng. 2006, 8:509-522.
    • (2006) Metab. Eng. , vol.8 , pp. 509-522
    • Lim, S.F.1    Chuan, K.H.2    Liu, S.3    Loh, S.O.4    Chung, B.Y.5    Ong, C.C.6    Song, Z.7
  • 24
    • 23044500915 scopus 로고    scopus 로고
    • Pyruvate kinase type M2 and its role in tumor growth and spreading
    • Mazurek S., Boschek C.B., Hugo F., Eigenbrodt E. Pyruvate kinase type M2 and its role in tumor growth and spreading. Semin. Cancer Biol. 2005, 15:300-308.
    • (2005) Semin. Cancer Biol. , vol.15 , pp. 300-308
    • Mazurek, S.1    Boschek, C.B.2    Hugo, F.3    Eigenbrodt, E.4
  • 25
    • 45049085323 scopus 로고    scopus 로고
    • MicroRNAs as targets for engineering of CHO cell factories
    • Müller D., Katinger H., Grillari J. MicroRNAs as targets for engineering of CHO cell factories. Trends Biotechnol. 2008, 26:359-365.
    • (2008) Trends Biotechnol. , vol.26 , pp. 359-365
    • Müller, D.1    Katinger, H.2    Grillari, J.3
  • 26
    • 0030049769 scopus 로고    scopus 로고
    • Comparative analysis of glucose and glutamine metabolism in transformed mammalian cell lines, insect and primary liver cells
    • Neermann J., Wagner R. Comparative analysis of glucose and glutamine metabolism in transformed mammalian cell lines, insect and primary liver cells. J. Cell. Physiol. 1996, 166:152-169.
    • (1996) J. Cell. Physiol. , vol.166 , pp. 152-169
    • Neermann, J.1    Wagner, R.2
  • 28
    • 34547191852 scopus 로고    scopus 로고
    • The complete nucleotide sequence of Chinese hamster (Cricetulus griseus) mitochondrial DNA
    • Partridge M.A., Davidson M.M., Hei T.K. The complete nucleotide sequence of Chinese hamster (Cricetulus griseus) mitochondrial DNA. DNA Seq. 2007, 18:341-346.
    • (2007) DNA Seq. , vol.18 , pp. 341-346
    • Partridge, M.A.1    Davidson, M.M.2    Hei, T.K.3
  • 29
    • 1842285853 scopus 로고
    • Development of the Chinese hamster ovary (CHO) cell
    • Puck T.T. Development of the Chinese hamster ovary (CHO) cell. Mol. Cell Genet. 1985, 1:37-64.
    • (1985) Mol. Cell Genet. , vol.1 , pp. 37-64
    • Puck, T.T.1
  • 30
    • 84873782420 scopus 로고
    • Genetics of somatic mammalian cells. III. Long-term cultivation of euploid cells from human and animal subjects
    • Puck T.T., Cieciura S.J., Robinson A. Genetics of somatic mammalian cells. III. Long-term cultivation of euploid cells from human and animal subjects. J. Exp. Med. 1958, 108:945-956.
    • (1958) J. Exp. Med. , vol.108 , pp. 945-956
    • Puck, T.T.1    Cieciura, S.J.2    Robinson, A.3
  • 33
    • 28144464078 scopus 로고    scopus 로고
    • Overexpression of prolylcarboxypeptidase enhances plasma prekallikrein activation on Chinese hamster ovary cells
    • Shariat-Madar Z., Rahimy E., Mahdi F., Schmaier A.H. Overexpression of prolylcarboxypeptidase enhances plasma prekallikrein activation on Chinese hamster ovary cells. Am. J. Physiol. Heart Circ. Physiol. 2005, 289:H2697-H2703.
    • (2005) Am. J. Physiol. Heart Circ. Physiol. , vol.289
    • Shariat-Madar, Z.1    Rahimy, E.2    Mahdi, F.3    Schmaier, A.H.4
  • 38
    • 67349211749 scopus 로고    scopus 로고
    • RNA interference technology to improve recombinant protein production in Chinese hamster ovary cells
    • Wu S.C. RNA interference technology to improve recombinant protein production in Chinese hamster ovary cells. Biotechnol. Adv. 2009, 27:417-422.
    • (2009) Biotechnol. Adv. , vol.27 , pp. 417-422
    • Wu, S.C.1
  • 39
    • 0034800374 scopus 로고    scopus 로고
    • InterProScan-an integration platform for the signature-recognition methods in InterPro
    • Zdobnov E.M., Apweiler R. InterProScan-an integration platform for the signature-recognition methods in InterPro. Bioinformatics 2001, 17:847-848.
    • (2001) Bioinformatics , vol.17 , pp. 847-848
    • Zdobnov, E.M.1    Apweiler, R.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.