메뉴 건너뛰기




Volumn 412, Issue 23-24, 2011, Pages 2015-2021

Differential expression of genes in retinoblastoma

Author keywords

Differential expression; DNA microarray; Real time polymerase chain reaction; Retinoblastoma; Tissue microarray

Indexed keywords

ATM GENE; ATR GENE; BRCA2 GENE; CHK1 GENE; CHROMATIN IMMUNOPRECIPITATION; CLINICAL PRACTICE; COMPUTER ASSISTED TOMOGRAPHY; DIAGNOSTIC ACCURACY; DIFFERENTIAL DIAGNOSIS; DNA MICROARRAY; DOWN REGULATION; ECHOGRAPHY; ENUCLEATION; EPIGENETICS; EXTERNAL BEAM RADIOTHERAPY; EXTRACELLULAR MATRIX; EYE DISEASE; FLUORESCENCE ANGIOGRAPHY; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION; GENE MUTATION; HETEROZYGOSITY LOSS; HUMAN; MICROARRAY ANALYSIS; MOLECULAR GENETICS; MORBIDITY; MORTALITY; ONCOGENE; OPHTHALMOSCOPY; PRIORITY JOURNAL; PROMOTER REGION; PROTEIN LOCALIZATION; REAL TIME POLYMERASE CHAIN REACTION; RETINOBLASTOMA; REVIEW; SIGNAL TRANSDUCTION; SLIT LAMP; TISSUE MICROARRAY; TRANSLATIONAL RESEARCH; TUMOR SUPPRESSOR GENE; UPREGULATION;

EID: 80053634609     PISSN: 00098981     EISSN: 18733492     Source Type: Journal    
DOI: 10.1016/j.cca.2010.10.009     Document Type: Review
Times cited : (9)

References (45)
  • 1
    • 16344388209 scopus 로고    scopus 로고
    • Detection of low level genomic alterations by comparative genomic hybridization based on cDNA micro-arrays
    • Bike S., Chen Q., Craig C.W., Khan J. Detection of low level genomic alterations by comparative genomic hybridization based on cDNA micro-arrays. Bioinformatics 2005, 21:1138-1145.
    • (2005) Bioinformatics , vol.21 , pp. 1138-1145
    • Bike, S.1    Chen, Q.2    Craig, C.W.3    Khan, J.4
  • 2
    • 44249118139 scopus 로고    scopus 로고
    • Functional genomics in translational cancer research: focus on breast cancer
    • Yulug I.G., Gur-Dedeoglu B. Functional genomics in translational cancer research: focus on breast cancer. Brief Funct Genomic Proteomic 2008, 7:1-7.
    • (2008) Brief Funct Genomic Proteomic , vol.7 , pp. 1-7
    • Yulug, I.G.1    Gur-Dedeoglu, B.2
  • 5
    • 0031757461 scopus 로고    scopus 로고
    • Retinoblastoma: problem and perspective from India
    • Sahu S., Banavali S.D., Pai S.K. Retinoblastoma: problem and perspective from India. Pediatr Hematol Oncol 1998, 15:501-508.
    • (1998) Pediatr Hematol Oncol , vol.15 , pp. 501-508
    • Sahu, S.1    Banavali, S.D.2    Pai, S.K.3
  • 6
    • 0015043748 scopus 로고
    • Mutation and cancer: statistical study of retinoblastoma
    • Knudson A.G. Mutation and cancer: statistical study of retinoblastoma. Proc Natl Acad Sci USA 1971, 68:820-823.
    • (1971) Proc Natl Acad Sci USA , vol.68 , pp. 820-823
    • Knudson, A.G.1
  • 7
    • 33847383911 scopus 로고    scopus 로고
    • Cellular events in tumorigenesis
    • Elsevier, London, A.D. Singh, B. Damato, A.L. Murphree, J.D. Perry (Eds.)
    • Dyer M.A., Harbour J.W. Cellular events in tumorigenesis. Clinical Ocular Oncology 2006, Elsevier, London. A.D. Singh, B. Damato, A.L. Murphree, J.D. Perry (Eds.).
    • (2006) Clinical Ocular Oncology
    • Dyer, M.A.1    Harbour, J.W.2
  • 8
    • 0027110048 scopus 로고
    • Interaction between human cyclin A and adenovirus E1A- associated p107 protein
    • Faha B., Ewen M.E., Tsai L.H., Livingston D.M., Harlow E. Interaction between human cyclin A and adenovirus E1A- associated p107 protein. Science 1992, 255:87-90.
    • (1992) Science , vol.255 , pp. 87-90
    • Faha, B.1    Ewen, M.E.2    Tsai, L.H.3    Livingston, D.M.4    Harlow, E.5
  • 9
    • 15444353328 scopus 로고    scopus 로고
    • PRb and p107/p130 are required for the regulated expression of different sets of E2F responsive genes
    • Hurdford R.K., Cobrinik D., Lee M., Dyson N. pRb and p107/p130 are required for the regulated expression of different sets of E2F responsive genes. Genes Dev 1997, 11:1447-1463.
    • (1997) Genes Dev , vol.11 , pp. 1447-1463
    • Hurdford, R.K.1    Cobrinik, D.2    Lee, M.3    Dyson, N.4
  • 11
    • 33748137236 scopus 로고    scopus 로고
    • Basic understanding of current classification and management of retinoblastoma
    • Shields C.L., Shields J.A. Basic understanding of current classification and management of retinoblastoma. Curr Opin Ophthalmol 2006, 17:228-234.
    • (2006) Curr Opin Ophthalmol , vol.17 , pp. 228-234
    • Shields, C.L.1    Shields, J.A.2
  • 12
    • 77951298209 scopus 로고    scopus 로고
    • Retinoblastoma management: advances in enucleation, intravenous chemoreduction, and intra-arterial chemotherapy
    • Shields C.L., Shields J.A. Retinoblastoma management: advances in enucleation, intravenous chemoreduction, and intra-arterial chemotherapy. Curr Opin Ophthalmol 2010, 21:203-212.
    • (2010) Curr Opin Ophthalmol , vol.21 , pp. 203-212
    • Shields, C.L.1    Shields, J.A.2
  • 14
    • 80053649754 scopus 로고    scopus 로고
    • Evidence based management for retinoblastoma
    • 35-45
    • Banavali S. Evidence based management for retinoblastoma. Indian J Med Paediatr Oncol 2004, 25:35-45. Suppl 2:35-45.
    • (2004) Indian J Med Paediatr Oncol , vol.25 , Issue.SUPPL. 2 , pp. 35-45
    • Banavali, S.1
  • 15
    • 77955610458 scopus 로고    scopus 로고
    • Differential gene expression profile of retinoblastoma compared to normal retina
    • Ganguly A., Shields C.L. Differential gene expression profile of retinoblastoma compared to normal retina. Mol Vis 2010, 16:1292-1303.
    • (2010) Mol Vis , vol.16 , pp. 1292-1303
    • Ganguly, A.1    Shields, C.L.2
  • 16
    • 34547457538 scopus 로고    scopus 로고
    • Identification of genes associated with tumorigenesis of retinoblastoma by microarray analysis
    • Chakraborty S., Khare S., Dorairaj S.K., Prabhakaran V.C., Prakash D.R., Kumar A. Identification of genes associated with tumorigenesis of retinoblastoma by microarray analysis. Genomics 2007, 90:344-353.
    • (2007) Genomics , vol.90 , pp. 344-353
    • Chakraborty, S.1    Khare, S.2    Dorairaj, S.K.3    Prabhakaran, V.C.4    Prakash, D.R.5    Kumar, A.6
  • 17
    • 57449085536 scopus 로고    scopus 로고
    • Identification of miRNAs associated with tumorigenesis of retinoblastoma by miRNA microarray analysis
    • Zhao J.J., Yang J., Lin J., et al. Identification of miRNAs associated with tumorigenesis of retinoblastoma by miRNA microarray analysis. Childs Nerv Syst 2009, 25:13-20.
    • (2009) Childs Nerv Syst , vol.25 , pp. 13-20
    • Zhao, J.J.1    Yang, J.2    Lin, J.3
  • 18
    • 12144290519 scopus 로고    scopus 로고
    • Human microRNA genes are frequently located at fragile sites and genomic regions involved in cancers
    • Calin G.A., Sevignani C., Dumitru C.D., et al. Human microRNA genes are frequently located at fragile sites and genomic regions involved in cancers. Proc Natl Acad Sci USA 2004, 101:2999-3004.
    • (2004) Proc Natl Acad Sci USA , vol.101 , pp. 2999-3004
    • Calin, G.A.1    Sevignani, C.2    Dumitru, C.D.3
  • 21
    • 77952310144 scopus 로고    scopus 로고
    • Differential expression of stem cell markers and vascular endothelial growth factor in human retinoblastoma tissue
    • Kim M., Kim J.H., Kim J.H., et al. Differential expression of stem cell markers and vascular endothelial growth factor in human retinoblastoma tissue. Korean J Ophthalmol 2010, 24:35-39.
    • (2010) Korean J Ophthalmol , vol.24 , pp. 35-39
    • Kim, M.1    Kim, J.H.2    Kim, J.H.3
  • 22
    • 35348922996 scopus 로고    scopus 로고
    • Identification of tumorigenic retinal stem cell-like cells in human solid retinoblastoma
    • Zhong X., Li Y., Peng F., et al. Identification of tumorigenic retinal stem cell-like cells in human solid retinoblastoma. Int J Cancer 2007, 15:2125-2131.
    • (2007) Int J Cancer , vol.15 , pp. 2125-2131
    • Zhong, X.1    Li, Y.2    Peng, F.3
  • 23
    • 75749127315 scopus 로고    scopus 로고
    • Downregulation and abberant promoter methylation of p16INK4A: a possible novel heritable susceptibility marker to retinoblastoma
    • Indovina P., Acquaviva A., De Falco G., et al. Downregulation and abberant promoter methylation of p16INK4A: a possible novel heritable susceptibility marker to retinoblastoma. J Cell Physiol 2010, 223:143-150.
    • (2010) J Cell Physiol , vol.223 , pp. 143-150
    • Indovina, P.1    Acquaviva, A.2    De Falco, G.3
  • 24
    • 77649340617 scopus 로고    scopus 로고
    • Correlation of overexpression of HMGA1 and HMGA2 with poor tumor differentiation, invasion, and proliferation associated with let-7 down-regulation in retinoblastomas
    • Mu G., Liu H., Zhou F., et al. Correlation of overexpression of HMGA1 and HMGA2 with poor tumor differentiation, invasion, and proliferation associated with let-7 down-regulation in retinoblastomas. Hum Pathol 2010, 41:493-502.
    • (2010) Hum Pathol , vol.41 , pp. 493-502
    • Mu, G.1    Liu, H.2    Zhou, F.3
  • 25
    • 77949887727 scopus 로고    scopus 로고
    • Differential roles of matrixmetalloproteinsae-9 and -2, depending on proliferation or differentiation of retinoblastoma cells
    • Kim J.H., Kim J.H., Cho C.S., et al. Differential roles of matrixmetalloproteinsae-9 and -2, depending on proliferation or differentiation of retinoblastoma cells. Invest Ophthalmol Vis Sci 2010, 51:1783-1788.
    • (2010) Invest Ophthalmol Vis Sci , vol.51 , pp. 1783-1788
    • Kim, J.H.1    Kim, J.H.2    Cho, C.S.3
  • 26
    • 70349211646 scopus 로고    scopus 로고
    • Differential CRX and OTX2 expression in human retina and retinoblastoma
    • Glubrecht D.D., Kim J.H., Russell L., et al. Differential CRX and OTX2 expression in human retina and retinoblastoma. J Neurochem 2009, 111:250-263.
    • (2009) J Neurochem , vol.111 , pp. 250-263
    • Glubrecht, D.D.1    Kim, J.H.2    Russell, L.3
  • 27
    • 70349578967 scopus 로고    scopus 로고
    • Differential microRNA-34a expression and tumor suppressor function in retinoblastoma cells
    • Dalgard C.L., Gonzalez M., de Niro J.E., et al. Differential microRNA-34a expression and tumor suppressor function in retinoblastoma cells. Invest Ophthalmol Vis Sci 2009, 50:4542-4551.
    • (2009) Invest Ophthalmol Vis Sci , vol.50 , pp. 4542-4551
    • Dalgard, C.L.1    Gonzalez, M.2    de Niro, J.E.3
  • 28
    • 0035297542 scopus 로고    scopus 로고
    • P53 and p21waf-1 expression correlates with apoptosis and cell survival in poorly differentiated, but not well-differentiated retinoblastomas
    • Divan A., Lawry J., Dunsmore I.R., et al. p53 and p21waf-1 expression correlates with apoptosis and cell survival in poorly differentiated, but not well-differentiated retinoblastomas. Cancer Res 2001, 61:3157-3163.
    • (2001) Cancer Res , vol.61 , pp. 3157-3163
    • Divan, A.1    Lawry, J.2    Dunsmore, I.R.3
  • 29
    • 0036903986 scopus 로고    scopus 로고
    • Missing expression of pRb2/p130 in human retinoblastomas is associated with reduced apoptosis and lesser differentiation
    • Bellan C., De Falco G., Tosi G.M., et al. Missing expression of pRb2/p130 in human retinoblastomas is associated with reduced apoptosis and lesser differentiation. Invest Ophthalmol Vis Sci 2002, 43:3602-3608.
    • (2002) Invest Ophthalmol Vis Sci , vol.43 , pp. 3602-3608
    • Bellan, C.1    De Falco, G.2    Tosi, G.M.3
  • 30
    • 33645995158 scopus 로고    scopus 로고
    • Immunohistochemical detection of multidrug-resistant protein expression in retinoblastoma treated by primary enucleation
    • Wilson M.W., Fraga C.H., Fuller C.E., et al. Immunohistochemical detection of multidrug-resistant protein expression in retinoblastoma treated by primary enucleation. Invest Ophthalmol Vis Sci 2006, 47:1269-1273.
    • (2006) Invest Ophthalmol Vis Sci , vol.47 , pp. 1269-1273
    • Wilson, M.W.1    Fraga, C.H.2    Fuller, C.E.3
  • 31
    • 3042694117 scopus 로고    scopus 로고
    • Large-scale meta-analysis of cancer microarray data identifies common transcriptional profiles of neoplastic transformation and progression
    • Rhodes D.R., Yu J., Shanker K., et al. Large-scale meta-analysis of cancer microarray data identifies common transcriptional profiles of neoplastic transformation and progression. Proc Natl Acad Sci USA 2004, 101:9309-9314.
    • (2004) Proc Natl Acad Sci USA , vol.101 , pp. 9309-9314
    • Rhodes, D.R.1    Yu, J.2    Shanker, K.3
  • 32
    • 39549116496 scopus 로고    scopus 로고
    • A latent variable approach for meta-analysis of gene expression data from multiple microarray experiments
    • Choi H., Shen R., Chinnaiyan A.M., et al. A latent variable approach for meta-analysis of gene expression data from multiple microarray experiments. BMC Bioinform 2007, 8:364-373.
    • (2007) BMC Bioinform , vol.8 , pp. 364-373
    • Choi, H.1    Shen, R.2    Chinnaiyan, A.M.3
  • 34
    • 13444304325 scopus 로고    scopus 로고
    • NCBI GEO: mining millions of expression profiles-database and tools
    • Barrett T., Suzek T.O., Troup D.B., et al. NCBI GEO: mining millions of expression profiles-database and tools. Nucleic Acids Res 2005, 33:562-566.
    • (2005) Nucleic Acids Res , vol.33 , pp. 562-566
    • Barrett, T.1    Suzek, T.O.2    Troup, D.B.3
  • 35
    • 1642377561 scopus 로고    scopus 로고
    • Oncomine: a cancer microarray database and integrated data-mining platform
    • Rhodes D.R., Yu J., Shanker K., et al. Oncomine: a cancer microarray database and integrated data-mining platform. Neoplasia 2004, 6:1-6.
    • (2004) Neoplasia , vol.6 , pp. 1-6
    • Rhodes, D.R.1    Yu, J.2    Shanker, K.3
  • 36
    • 33751568124 scopus 로고    scopus 로고
    • Identification and meta-analysis of a small gene expression signature for the diagnosis of estrogen receptor status in invasive ductal breast cancer
    • Schneider J., Ruschhaupt M., Buness A., et al. Identification and meta-analysis of a small gene expression signature for the diagnosis of estrogen receptor status in invasive ductal breast cancer. Int J Cancer 2006, 119:2974-2979.
    • (2006) Int J Cancer , vol.119 , pp. 2974-2979
    • Schneider, J.1    Ruschhaupt, M.2    Buness, A.3
  • 37
    • 0036320413 scopus 로고    scopus 로고
    • Real-time PCR technology for cancer diagnostics
    • Bernard P.S., Wittwer C.T. Real-time PCR technology for cancer diagnostics. Clin Chem 2002, 48:1178-1185.
    • (2002) Clin Chem , vol.48 , pp. 1178-1185
    • Bernard, P.S.1    Wittwer, C.T.2
  • 38
    • 1842829051 scopus 로고    scopus 로고
    • Real-time RT-PCR: considerations for efficient and sensitive assay design
    • Peters I.R., Helps C.R., Hall E.J., et al. Real-time RT-PCR: considerations for efficient and sensitive assay design. J Immunol Methods 2004, 286:203-217.
    • (2004) J Immunol Methods , vol.286 , pp. 203-217
    • Peters, I.R.1    Helps, C.R.2    Hall, E.J.3
  • 39
    • 33748503420 scopus 로고    scopus 로고
    • Evaluation of DNA microarray results with quantitative gene expression platforms
    • Canales R.D., Luo Y., Willey J.C., et al. Evaluation of DNA microarray results with quantitative gene expression platforms. Nat Biotechnol 2006, 24:1123-1131.
    • (2006) Nat Biotechnol , vol.24 , pp. 1123-1131
    • Canales, R.D.1    Luo, Y.2    Willey, J.C.3
  • 40
    • 0034565409 scopus 로고    scopus 로고
    • Quantitative gene expression analysis in microdissected archival tissue by real-time RT-PCR
    • Specht K., Richter T., Muller U., et al. Quantitative gene expression analysis in microdissected archival tissue by real-time RT-PCR. J Mol Med 2000, 78:B27.
    • (2000) J Mol Med , vol.78
    • Specht, K.1    Richter, T.2    Muller, U.3
  • 41
    • 33745834662 scopus 로고    scopus 로고
    • Distinct molecular mechanisms underlying clinically relevant subtypes of breast cancer: gene expression analyses across three different platforms
    • Sorlie T., Wang Y., Xiao C., et al. Distinct molecular mechanisms underlying clinically relevant subtypes of breast cancer: gene expression analyses across three different platforms. BMC Genomics 2006, 7:127-141.
    • (2006) BMC Genomics , vol.7 , pp. 127-141
    • Sorlie, T.1    Wang, Y.2    Xiao, C.3
  • 42
    • 33645779944 scopus 로고    scopus 로고
    • Molecular classification of human cancers using a 92-gene real-time quantitative polymerase chain reaction assay
    • Ma X.J., Patel R., Wang X., et al. Molecular classification of human cancers using a 92-gene real-time quantitative polymerase chain reaction assay. Arch Pathol Lab Med 2006, 130:465-473.
    • (2006) Arch Pathol Lab Med , vol.130 , pp. 465-473
    • Ma, X.J.1    Patel, R.2    Wang, X.3
  • 43
    • 19944422061 scopus 로고    scopus 로고
    • A multigene assay to predict recurrence of tamoxifen-treated, node-negative breast cancer
    • Paik S., Shak S., Tang G., et al. A multigene assay to predict recurrence of tamoxifen-treated, node-negative breast cancer. N Engl J Med 2004, 351:2817-2826.
    • (2004) N Engl J Med , vol.351 , pp. 2817-2826
    • Paik, S.1    Shak, S.2    Tang, G.3
  • 44
    • 68949114453 scopus 로고    scopus 로고
    • Tissue microarray: a rapidly evolving diagnostic and research tool
    • Jawhar N.M. Tissue microarray: a rapidly evolving diagnostic and research tool. Ann Saudi Med 2009, 29:123-127.
    • (2009) Ann Saudi Med , vol.29 , pp. 123-127
    • Jawhar, N.M.1
  • 45
    • 0345357773 scopus 로고    scopus 로고
    • Gene silencing in cancer in association with promoter hypermethylation
    • Herman J.G., Baylin S.B. Gene silencing in cancer in association with promoter hypermethylation. N Engl J Med 2003, 349:2042-2054.
    • (2003) N Engl J Med , vol.349 , pp. 2042-2054
    • Herman, J.G.1    Baylin, S.B.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.