Chromosome organization by a nucleoid-associated protein in live bacteria

Science

Volumn 333, Issue 6048, 2011, Pages 1445-1449

  Wang, Wenqin ^a   Li, Gene Wei ^a,b   Chen, Chongyi ^b,c   Xie, X Sunney ^b   Zhuang, Xiaowei ^a,b,c  

^a HARVARD UNIVERSITY   (United States)

^b HARVARD UNIVERSITY   (United States)

^c HARVARD UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL PROTEIN; BETA GALACTOSIDASE; HISTONE LIKE NUCLEOID STRUCTURING PROTEIN; NUCLEOID ASSOCIATED PROTEIN; UNCLASSIFIED DRUG;

BACTERIUM; BIOASSAY; CHROMOSOME; GENE EXPRESSION; MICROSCOPY; MOLECULAR ANALYSIS; POLYMER; PROTEIN;

ARTICLE; BACTERIAL CELL; CHROMOSOME; CHROMOSOME STRUCTURE; CONTROLLED STUDY; ESCHERICHIA COLI; FLUORESCENCE MICROSCOPY; GENE CLUSTER; GENE DOSAGE; GENE MUTATION; IN VIVO STUDY; NONHUMAN; OLIGOMERIZATION; OPERON; PRIORITY JOURNAL; PROTEIN DNA INTERACTION; PROTEIN DOMAIN; PROTEIN EXPRESSION;

BINDING SITES; CELL DIVISION; CHROMOSOMES, BACTERIAL; DNA, BACTERIAL; DNA-BINDING PROTEINS; ESCHERICHIA COLI K12; ESCHERICHIA COLI PROTEINS; FACTOR FOR INVERSION STIMULATION PROTEIN; FIMBRIAE PROTEINS; GENE EXPRESSION REGULATION, BACTERIAL; GENETIC LOCI; GENOME, BACTERIAL; INTEGRATION HOST FACTORS; MOLECULAR CHAPERONES; NUCLEIC ACID CONFORMATION; OPERON; PROTEIN MULTIMERIZATION; PROTEIN STRUCTURE, TERTIARY; RECOMBINANT FUSION PROTEINS; REPRESSOR PROTEINS;

BACTERIA (MICROORGANISMS); ESCHERICHIA COLI;

EID: 80052643394     PISSN: 00368075     EISSN: 10959203     Source Type: Journal    
DOI: 10.1126/science.1204697     Document Type: Article

References (43)

1. C. Robinow, E. Kellenberger, Microbiol. Rev. 58, 211 (1994).
2. M. Eltsov, B. Zuber, J. Struct. Biol. 156, 246 (2006).
3. Z. Gitai, M. Thanbichler, L. Shapiro, Trends Microbiol. 13, 221 (2005).
4. R. Reyes-Lamothe, X. Wang, D. Sherratt, Trends Microbiol. 16, 238 (2008).
5. O. Espéli, F. Boccard, J. Struct. Biol. 156, 304 (2006).
6. R. C. Johnson, L. M. Johnson, J. W. Schmidt, J. F. Gardner, in The Bacterial Chromosome, N. P. Higgins, Ed. (ASM Press, Washington, DC, 2005), chap. 1.5.
7. S. C. Dillon, C. J. Dorman, Nat. Rev. Microbiol. 8, 185 (2010).
8. D. C. Grainger, D. Hurd, M. D. Goldberg, S. J. Busby, Nucleic Acids Res. 34, 4642 (2006).
9. T. Oshima, S. Ishikawa, K. Kurokawa, H. Aiba, N. Ogasawara, DNA Res. 13, 141 (2006).
10. G.-W. Li, O. G. Berg, J. Elf, Nat. Phys. 5, 294 (2009).
11. W. W. Navarre et al., Science 313, 236 (2006); 10.1126/science.1128794.
12. S. Lucchini et al., PLoS Pathog. 2, e81 (2006).
13. B. Lang et al., Nucleic Acids Res. 35, 6330 (2007).
14. C. J. Dorman, Nat. Rev. Microbiol. 2, 391 (2004).
15. F. C. Fang, S. Rimsky, Curr. Opin. Microbiol. 11, 113 (2008).
16. V. McGovern, N. P. Higgins, R. S. Chiz, A. Jaworski, Biochimie 76, 1019 (1994).
17. C. P. Smyth et al., Mol. Microbiol. 36, 962 (2000).
18. S. Rimsky, Curr. Opin. Microbiol. 7, 109 (2004).
19. R. T. Dame, M. C. Noom, G. J. Wuite, Nature 444, 387 (2006).
20. Y. Liu, H. Chen, L. J. Kenney, J. Yan, Genes Dev. 24, 339 (2010).
21. T. Vora, A. K. Hottes, S. Tavazoie, Mol. Cell 35, 247 (2009).
22. J. Deich, E. M. Judd, H. H. McAdams, W. E. Moerner, Proc. Natl. Acad. Sci. U.S.A. 101, 15921 (2004).
23. J. Elf, G.-W. Li, X. S. Xie, Science 316, 1191 (2007).
24. Y. Taniguchi et al., Science 329, 533 (2010).
25. M. J. Rust, M. Bates, X. Zhuang, Nat. Methods 3, 793 (2006).
26. E. Betzig et al., Science 313, 1642 (2006); 10.1126/science.1127344.
27. S. T. Hess, T. P. Girirajan, M. D. Mason, Biophys. J. 91, 4258 (2006).
28. J. S. Biteen et al., Nat. Methods 5, 947 (2008).
29. B. Huang, H. Babcock, X. Zhuang, Cell 143, 1047 (2010).
30. S. A. McKinney, C. S. Murphy, K. L. Hazelwood, M. W. Davidson, L. L. Looger, Nat. Methods 6, 131 (2009).
31. Materials and methods and other supporting materials are available on Science Online.
32. B. Huang, W. Wang, M. Bates, X. Zhuang, Science 319, 810 (2008); 10.1126/science.1153529.
33. A. Egner et al., Biophys. J. 93, 3285 (2007).
34. S. F. Lee, M. A. Thompson, M. A. Schwartz, L. Shapiro, W. E. Moerner, Biophys. J. 100, L31 (2011).
35. W. K. Smits, A. D. Grossman, PLoS Genet. 6, e1001207 (2010).
36. C. Ueguchi, C. Seto, T. Suzuki, T. Mizuno, J. Mol. Biol. 274, 145 (1997).
37. R. Spurio, M. Falconi, A. Brandi, C. L. Pon, C. O. Gualerzi, EMBO J. 16, 1795 (1997).
38. C. Badaut et al., J. Biol. Chem. 277, 41657 (2002).
39. F. V. Subach et al., Nat. Methods 6, 153 (2009).
40. W. Schumann, in Dynamics of the Bacterial Chromosome (Wiley-VCH, Weinheim, Germany, 2006), chap. 2.2.
41. J. Reidl, W. Boos, J. Bacteriol. 173, 4862 (1991).
42. J. Dekker, K. Rippe, M. Dekker, N. Kleckner, Science 295, 1306 (2002).
43. F. Hommais et al., Mol. Microbiol. 40, 20 (2001).