Role of the Five RNA Helicases in the adaptive response of Bacillus cereus ATCC 14579 cells to temperature, pH, and oxidative stresses

Applied and Environmental Microbiology

Volumn 77, Issue 16, 2011, Pages 5604-5609

  Pandiani, Franck ^a,b   Chamot, Stéphanie ^a,b   Brillard, Julien ^a,b   Carlin, Frédéric ^a,b   Nguyen the, Christophe ^a,b   Broussolle, Véronique ^a,b  

^a UMR A 408 INRA University of Avignon   (France)

^b UNIVERSITY OF AVIGNON   (France)

Author keywords

[No Author keywords available]

Indexed keywords

ADAPTIVE RESPONSE; DIAMIDES; LAG-TIME; LOW TEMPERATURES; OXIDATIVE CONDITIONS; PH STRESS; REDUCED GROWTH RATE; RNA HELICASES; TEMPERATURE RANGE; WILD-TYPE STRAIN;

BACILLI; BACTERIOLOGY; GROWTH RATE; PH EFFECTS; RNA;

BACILLUS CEREUS;

DIAMIDE; HYDROGEN PEROXIDE; RNA HELICASE;

ADAPTIVE RADIATION; BACTERIUM; CELL ORGANELLE; CONCENTRATION (COMPOSITION); ENZYME ACTIVITY; GENETIC ANALYSIS; GROWTH RESPONSE; LOW TEMPERATURE; OXIDATION; PH; PHENOTYPE; PHYSIOLOGICAL RESPONSE; WILD POPULATION;

ADAPTATION; ARTICLE; BACILLUS CEREUS; BACTERIAL GENE; DRUG EFFECT; ENZYMOLOGY; GENE DELETION; GENETICS; GROWTH, DEVELOPMENT AND AGING; METABOLISM; OXIDATIVE STRESS; PH; TEMPERATURE;

ADAPTATION, PHYSIOLOGICAL; BACILLUS CEREUS; DIAMIDE; GENE DELETION; GENES, BACTERIAL; HYDROGEN PEROXIDE; HYDROGEN-ION CONCENTRATION; OXIDATIVE STRESS; RNA HELICASES; TEMPERATURE;

BACILLUS CEREUS ATCC 14579;

EID: 80052615063     PISSN: 00992240     EISSN: 10985336     Source Type: Journal    
DOI: 10.1128/AEM.02974-10     Document Type: Article

References (28)

1. Augustin, J. C., L. Rosso, and V. Carlier. 1999. Estimation of temperature dependent growth rate and lag time of Listeria monocytogenes by optical density measurements. J. Microbiol. Methods 38:137-146.
2. Briolat, V., and G. Reysset. 2002. Identification of the Clostridium perfringens genes involved in the adaptive response to oxidative stress. J. Bacteriol. 184:2333-2343.
3. Broussolle, V., et al. 2010. Insertional mutagenesis reveals genes involved in Bacillus cereus ATCC 14579 growth at low temperature. FEMS Microbiol. Lett. 306:177-183.
4. Carpousis, A. J. 2007. The RNA degradosome of Escherichia coli: an mRNA-degrading machine assembled on RNase E. Annu. Rev. Microbiol. 61:71-87.
5. Chamot, D., K. R. Colvin, S. L. Kujat-Choy, and G. W. Owttrim. 2005. RNA structural rearrangement via unwinding and annealing by the cyanobacterial RNA helicase, CrhR. J. Biol. Chem. 280:2036-2044.
6. Charollais, J., M. Dreyfus, and I. Iost. 2004. CsdA, a cold-shock RNA helicase from Escherichia coli, is involved in the biogenesis of 50S ribosomal subunit. Nucleic Acids Res. 32:2751-2759.
7. Charollais, J., D. Pflieger, J. Vinh, M. Dreyfus, and I. Iost. 2003. The DEAD-box RNA helicase SrmB is involved in the assembly of 50S ribosomal subunits in Escherichia coli. Mol. Microbiol. 48:1253-1265.
8. Claus, D., and R. C. W. Berkeley. 1986. Genus Bacillus Cohn 1872, 174AL, p. 1105-1139. In P. H. A. Sneath, N. S. Mair, M. E. Sharpe, and J. G. Holt (ed.), Bergey's manual of systematic bacteriology, vol. 2. Williams & Wilkins, Baltimore, MD.
9. Cordin, O., J. Banroques, N. K. Tanner, and P. Linder. 2006. The DEADbox protein family of RNA helicases. Gene 367:17-37.
10. Hunger, K., C. L. Beckering, F. Wiegeshoff, P. L. Graumann, and M. A. Marahiel. 2006. Cold-induced putative DEAD box RNA helicases CshA and CshB are essential for cold adaptation and interact with cold shock protein B in Bacillus subtilis. J. Bacteriol. 188:240-248.
11. Jones, P. G., M. Mitta, Y. Kim, W. N. Jiang, and M. Inouye. 1996. Cold shock induces a major ribosomal-associated protein that unwinds double-stranded RNA in Escherichia coli. Proc. Natl. Acad. Sci. U. S. A. 93:76-80.
12. Kujat, S. L., and G. W. Owttrim. 2000. Redox-regulated RNA helicase expression. Plant Physiol. 124:703-713.
13. Linder, P. 2006. Dead-box proteins: a family affair-active and passive players in RNP-remodeling. Nucleic Acids Res. 34:4168-4180.
14. Marcaida, M. J., M. A. DePristo, V. Chandran, A. J. Carpousis, and B. F. Luisi. 2006. The RNA degradosome: life in the fast lane of adaptive molecular evolution. Trends Biochem. Sci. 31:359-365.
15. Mols, M., R. van Kranenburg, C. C. J. van Melis, R. Moezelaar, and T. Abee. 2010. Analysis of acid-stressed Bacillus cereus reveals a major oxidative response and inactivation-associated radical formation. Environ. Microbiol. 12:873-885.
16. Nakamura, K., and T. Tamaoki. 1968. Reversible dissociation of Escherichia coli ribosomes by hydrogen peroxide. Biochim. Biophys. Acta 161:368-376.
17. Owttrim, G. W. 2006. RNA helicases and abiotic stress. Nucleic Acids Res. 34:3220-3230.
18. Pandiani, F., et al. 2010. Differential involvement of the five RNA helicases in adaptation of Bacillus cereus ATCC 14579 to low growth temperature. Appl. Environ. Microbiol. 76:6692-6697.
19. Regonesi, M. E., et al. 2006. Analysis of the Escherichia coli RNA degradosome composition by a proteomic approach. Biochimie 88:151-161.
20. Sodergren, E., J. Nourooz-Zadeh, L. Berglund, and B. Vessby. 1998. Reevaluation of the ferrous oxidation in xylenol orange assay for the measurement of plasma lipid hydroperoxides. J. Biochem. Biophys. Methods 37:137-146.
21. Story, R. M., H. Li, and J. N. Abelson. 2001. Crystal structure of a DEAD box protein from the hyperthermophile Methanococcus jannaschii. Proc. Natl. Acad. Sci. U. S. A. 98:1465-1470.
22. Tanner, N. K., and P. Linder. 2001. DExD/H box RNA helicases: from generic motors to specific dissociation functions. Mol. Cell 8:251-262.
23. Trubetskoy, D., F. Proux, F. Allemand, M. Dreyfus, and I. Iost. 2009. SrmB, a DEAD-box helicase involved in Escherichia coli ribosome assembly, is specifically targeted to 23S rRNA in vivo. Nucleic Acids Res. 37:6540-6549.
24. Valdez, B. C., D. Henning, K. Perumal, and H. Busch. 1997. RNA-unwinding and RNA-folding activities of RNA helicase II Gu-two activities in separate domains of the same protein. Eur. J. Biochem. 250:800-807.
25. Vinnemeier, J., and M. Hagemann. 1999. Identification of salt-regulated genes in the genome of the cyanobacterium Synechocystis sp strain PCC 6803 by subtractive RNA hybridization. Arch. Microbiol. 172:377-386.
26. Worrall, J. A. R., et al. 2008. Reconstitution and analysis of the multienzyme Escherichia coli RNA degradosome. J. Mol. Biol. 382:870-883.
27. Zuber, P. 2009. Management of oxidative stress in Bacillus. Annu. Rev. Microbiol. 63:575-597.
28. Zwietering, M. H., I. Jongenburger, F. M. Rombouts, and K. Vantriet. 1990. Modelling of the bacterial growth curve. Appl. Environ. Microbiol. 56:1875-1881.