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Volumn 38, Issue 6, 2011, Pages 3929-3934

Sequence of specific mitochondrial 16S rRNA gene fragment from Egyptian buffalo is used as a pattern for discrimination between river buffaloes, cattle, sheep and goats

Author keywords

16S rRNA gene; Bovidae; Mitochondrial DNA; Sequence analysis; Species identification

Indexed keywords

CYTOCHROME C OXIDASE; CYTOCHROME C OXIDASE 1; DNA FRAGMENT; NUCLEOTIDE; RNA 16S; UNCLASSIFIED DRUG;

EID: 80052429647     PISSN: 03014851     EISSN: 15734978     Source Type: Journal    
DOI: 10.1007/s11033-010-0509-0     Document Type: Article
Times cited : (12)

References (37)
  • 1
    • 0035751843 scopus 로고    scopus 로고
    • Identity, traceability, acceptability and substantial equivalence of food
    • Pascal G, Mahe S (2001) Identity, traceability, acceptability and substantial equivalence of food. Cell Mol Biol 47:1329-1342.
    • (2001) Cell Mol Biol , vol.47 , pp. 1329-1342
    • Pascal, G.1    Mahe, S.2
  • 2
    • 0032415561 scopus 로고    scopus 로고
    • Identification of animal species in ground meat mixtures by multivariate analysis of isoelectric focusing protein profiles
    • DOI 10.1002/elps.1150191811
    • Skarpeid HJ, Kvaal K, Hildrum KI (1998) Identification of animal species in ground meat mixtures by multivariate analysis of isoelectric focusing protein profiles. Electrophoresis 19:3103-3109. (Pubitemid 29038406)
    • (1998) Electrophoresis , vol.19 , Issue.18 , pp. 3103-3109
    • Skarpeid, H.-J.1    Kvaal, K.2    Hildrum, K.I.3
  • 3
    • 0032055978 scopus 로고    scopus 로고
    • Development of a monoclonal antibody specific to cooked mammalian meats
    • Hsieh YH, Sheu SC, Bridgman RC (1998) Development of a monoclonal antibody specific to cooked mammalian meats. J Food Prot 61(4):476-487.
    • (1998) J Food Prot , vol.61 , Issue.4 , pp. 476-487
    • Hsieh, Y.H.1    Sheu, S.C.2    Bridgman, R.C.3
  • 7
    • 0028867247 scopus 로고
    • Forensic identification of ungulate species using restriction digests of PCRamplified mitochondrial DNA
    • Murray BW, McClymont RA, Strobeck C (1995) Forensic identification of ungulate species using restriction digests of PCRamplified mitochondrial DNA. J Forensic Sci 40(6):943-951.
    • (1995) J Forensic Sci , vol.40 , Issue.6 , pp. 943-951
    • Murray, B.W.1    Mcclymont, R.A.2    Strobeck, C.3
  • 8
  • 10
    • 0344520328 scopus 로고    scopus 로고
    • Identification of goose, mule, duck, chicken, turkey, and swine in foie gras by species-specific polymerase chain reaction
    • Rodríguez MA, García T, González I et al (2003) Identification of goose, mule, duck, chicken, turkey, and swine in foie gras by species-specific polymerase chain reaction. J Agric Food Chem 51:1524-1529.
    • (2003) J Agric Food Chem , vol.51 , pp. 1524-1529
    • Rodríguez, M.A.1    García, T.2    González, I.3
  • 12
    • 54949107818 scopus 로고    scopus 로고
    • Phylogenetic analysis and comparison between cow and buffalo (including Egyptian buffaloes) mitochondrial displacement-loop regions
    • Ramadan HAI, El Hefnawi M (2008) Phylogenetic analysis and comparison between cow and buffalo (including Egyptian buffaloes) mitochondrial displacement-loop regions. Mitochondrial DNA 19(4):401-410.
    • (2008) Mitochondrial DNA , vol.19 , Issue.4 , pp. 401-410
    • Ramadan, H.A.I.1    El Hefnawi, M.2
  • 13
    • 33847411916 scopus 로고    scopus 로고
    • DNA barcoding in animal species: Progress, potential and pitfalls
    • DOI 10.1002/bies.20529
    • Waugh J (2007) DNA barcoding in animal species: progress, potential and pitfalls. BioEssays 29(2):188-197. (Pubitemid 46340253)
    • (2007) BioEssays , vol.29 , Issue.2 , pp. 188-197
    • Waugh, J.1
  • 18
    • 17444426152 scopus 로고    scopus 로고
    • Comparative performance of the 16S rRNA gene in DNA barcoding of amphibians
    • doi:10.1186/1742- 9994-2-5
    • Vences M, Thomas M, Meijden AVD, Chiari Y, Vieites DR (2005) Comparative performance of the 16S rRNA gene in DNA barcoding of amphibians. Front Zool 2:5. doi:10.1186/1742- 9994-2-5.
    • (2005) Front Zool , vol.2 , pp. 5
    • Vences, M.1    Thomas, M.2    Meijden, A.V.D.3    Chiari, Y.4    Vieites, D.R.5
  • 19
    • 0035205972 scopus 로고    scopus 로고
    • A test of the genetic species concept: Cytochrome-b sequences and mammals
    • DOI 10.1644/1545-1542(2001)082<0960:ATOTGS>2.0.CO;2
    • Bradley RD, Baker RJ (2001) A test of the genetic species concept: cytochrome b sequences and mammals. J Mammal 82: 960-973. (Pubitemid 33146161)
    • (2001) Journal of Mammalogy , vol.82 , Issue.4 , pp. 960-973
    • Bradley, R.D.1    Baker, R.J.2
  • 20
    • 33846343257 scopus 로고    scopus 로고
    • Cytochrome b barcoding, molecular systematics and geographic differentiation in rabbitfishes (Siganidae)
    • DOI 10.1016/j.crvi.2006.09.002, PII S1631069106002290
    • Lemer S, Aurelle D, Vigliola L, Durand JD, Borsa P (2007) Cytochrome b barcoding, molecular systematics and geographic differentiation in rabbitfishes (Siganidae). C R Biol 330:86-94. (Pubitemid 46126735)
    • (2007) Comptes Rendus - Biologies , vol.330 , Issue.1 , pp. 86-94
    • Lemer, S.1    Aurelle, D.2    Vigliola, L.3    Durand, J.-D.4    Borsa, P.5
  • 22
    • 34447337206 scopus 로고    scopus 로고
    • Design and applicability of DNA arrays and DNA barcodes in biodiversity monitoring
    • doi:10.1186/1741- 7007-5-24
    • Hajibabaei M, Singer GAC, Clare EL, Hebert PDN (2007) Design and applicability of DNA arrays and DNA barcodes in biodiversity monitoring. BMC Biol 5:24. doi:10.1186/1741- 7007-5-24).
    • (2007) BMC Biol , vol.5 , pp. 24
    • Hajibabaei, M.1    Singer, G.A.C.2    Clare, E.L.3    Hebert, P.D.N.4
  • 23
    • 80052464088 scopus 로고    scopus 로고
    • Sequence of specific mitochondrial 12S rRNA fragment of Egyptian buffalo as a reference for discrimination between buffalo, cattle, sheep and goat
    • Ramadan HAI, Mahfouz ER (2009) Sequence of specific mitochondrial 12S rRNA fragment of Egyptian buffalo as a reference for discrimination between buffalo, cattle, sheep and goat. J Appl Biosci 21:1258-1264.
    • (2009) J Appl Biosci , vol.21 , pp. 1258-1264
    • Ramadan, H.A.I.1    Mahfouz, E.R.2
  • 26
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE: Multiple sequence alignment with high accuracy and high throughput
    • DOI 10.1093/nar/gkh340
    • Edgar RC (2004) MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucl Acids Res 32: 1792-1797. (Pubitemid 38832724)
    • (2004) Nucleic Acids Research , vol.32 , Issue.5 , pp. 1792-1797
    • Edgar, R.C.1
  • 27
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice. Nucl Acids Res 22: 4673-4680. (Pubitemid 24354800)
    • (1994) Nucleic Acids Research , vol.22 , Issue.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 29
    • 0037227776 scopus 로고    scopus 로고
    • Validation of cytochrome b sequence analysis as a method of species identification
    • Branicki W, Kupiec T, Pawlowski R (2003) Validation of cytochrome b sequence analysis as a method of species identification. J Forensic Sci 48:83-87. (Pubitemid 36084086)
    • (2003) Journal of Forensic Sciences , vol.48 , Issue.1 , pp. 83-87
    • Branicki, W.1    Kupiec, T.2    Pawlowski, R.3
  • 30
    • 25444493169 scopus 로고    scopus 로고
    • Diagnostic polymorphisms in the mitochondrial cytochrome b gene allow discrimination between cattle, sheep, goat, roe buck and deer by PCR-RFLP
    • DOI 10.1186/1471-2156-5-30
    • Pfeiffer I, Burger J, Brenig B (2004) Diagnostic polymorphisms in the mitochondrial cytochrome b gene allow discrimination between cattle, sheep, goat, roe buck and deer by PCR-RFLP. BMC Genet 5:30. doi:10.1186/1471-2156-5-30. (Pubitemid 41363873)
    • (2004) BMC Genetics , vol.5 , pp. 30
    • Pfeiffer, I.1    Burger, J.2    Brenig, B.3
  • 31
    • 1942509236 scopus 로고    scopus 로고
    • The Secondary Structure of Mammalian Mitochondrial 16S rRNA Molecules Refinements Based on a Comparative Phylogenetic Approach
    • DOI 10.1023/A:1022649516930
    • Burk A, Douzery EJP, Springer MS (2002) The secondary structure of mammalian mitochondrial 16S rRNA molecules: refinements based on a comparative phylogenetic approach. J Mamm Evol 9:225-252. (Pubitemid 36345370)
    • (2002) Journal of Mammalian Evolution , vol.9 , Issue.3 , pp. 225-252
    • Burk, A.1    Douzery, E.J.2    Springer, M.S.3
  • 32
    • 0026565222 scopus 로고
    • Nucleotide sequence variation in the mitochondrial 12S rRNA gene and the phylogeny of African mole-rats (Rodentia: Bathyergidae)
    • Allard WM, Honeycutt LR (1992) Nucleotide sequence variation in the mitochondrial 12S rRNA gene and the phylogeny of African mole-rats (Rodentia: Bathyergidae). Mol Biol Evol 9:27-40.
    • (1992) Mol Biol Evol , vol.9 , pp. 27-40
    • Allard, W.M.1    Honeycutt, L.R.2
  • 33
    • 0031741183 scopus 로고    scopus 로고
    • Hierarchical analysis of variation in the mitochondrial 16S rRNA gene among Hymenoptera
    • Whitfield JB, Cameron AS (1998) Hierarchical analysis of variation in the mitochondrial 16S rRNA gene among Hymenoptera. Mol Biol Evol 15:1728-1743. (Pubitemid 28550996)
    • (1998) Molecular Biology and Evolution , vol.15 , Issue.12 , pp. 1728-1743
    • Whitfield, J.B.1    Cameron, S.A.2
  • 34
    • 0032708406 scopus 로고    scopus 로고
    • Phylogeography of three closely related African Bovids
    • Arctander P, Johansen C, Vreto M(1999) Phylogeography of three closely related African Bovids. Mol Biol Evol 16:1724-1739.
    • (1999) Mol Biol Evol , vol.16 , pp. 1724-1739
    • Arctander, P.1    Johansen, C.2    Vreto, M.3
  • 37
    • 0842323950 scopus 로고    scopus 로고
    • Analysis of mitochondrial D-loop region casts new light on domestic water buffalo (Bubalus bubalis) phylogeny
    • DOI 10.1016/S1055-7903(03)00221-5
    • Kierstein G, Vallinoto M, Silva A, Schneider MP, Iannuzzi L, Brenig B (2004) Analysis of mitochondrial D-loop region casts new light on domestic water buffalo (Bubalus bubalis) phylogeny. Mol Phylogenet Evol 30(2):308-324. (Pubitemid 38170892)
    • (2004) Molecular Phylogenetics and Evolution , vol.30 , Issue.2 , pp. 308-324
    • Kierstein, G.1    Vallinoto, M.2    Silva, A.3    Schneider, M.P.4    Iannuzzi, L.5    Brenig, B.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.