메뉴 건너뛰기




Volumn 7, Issue , 2011, Pages

Human metabolic profiles are stably controlled by genetic and environmental variation

(26)  Nicholson, George a   Rantalainen, Mattias a   Maher, Anthony D b,i   Li, Jia V b   Malmodin, Daniel c   Ahmadi, Kourosh R d   Faber, Johan H c   Hallgrímsdóttir, Ingileif B a   Barrett, Amy e   Toft, Henrik c   Krestyaninova, Maria f   Viksna, Juris g   Neogi, Sudeshna Guha h   Dumas, Marc Emmanuel b   Sarkans, Ugis f   Silverman, Bernard W a,j   Donnelly, Peter a,j   Nicholson, Jeremy K b   Allen, Maxine e   Zondervan, Krina T j   more..


Author keywords

1H nuclear magnetic resonance spectroscopy; biomarker; metabolome wide association study; top down systems biology; variance decomposition

Indexed keywords

ARTICLE; CONTROLLED STUDY; DISEASE PREDISPOSITION; FEMALE; GENETIC ASSOCIATION; GENETIC VARIABILITY; HEREDITY; HUMAN; HUMAN EXPERIMENT; LONGITUDINAL STUDY; MALE; MATHEMATICAL PARAMETERS; METABOLITE; METABOLOME; NORMAL HUMAN; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; PRIORITY JOURNAL; SEMEN ANALYSIS; URINALYSIS; AGED; ALGORITHM; BLOOD; CAUCASIAN; DIZYGOTIC TWINS; GENETIC DATABASE; GENETICS; GENOTYPE ENVIRONMENT INTERACTION; METHODOLOGY; MIDDLE AGED; MONOZYGOTIC TWINS; NUCLEAR MAGNETIC RESONANCE; SAMPLE SIZE; STATISTICAL MODEL; SYSTEMS BIOLOGY; URINE;

EID: 80052400897     PISSN: None     EISSN: 17444292     Source Type: Journal    
DOI: 10.1038/msb.2011.57     Document Type: Article
Times cited : (144)

References (65)
  • 1
    • 38349041898 scopus 로고    scopus 로고
    • Critical evaluation of 1H NMR metabonomics of serum as a methodology for disease risk assessment and diagnostics
    • Ala-Korpela M (2008) Critical evaluation of 1H NMR metabonomics of serum as a methodology for disease risk assessment and diagnostics. Clin Chem Lab Med 46: 27-42
    • (2008) Clin Chem Lab Med , vol.46 , pp. 27-42
    • Ala-Korpela, M.1
  • 3
    • 4744358486 scopus 로고    scopus 로고
    • Heritability of biochemical kidney markers and relation to survival in the elderly - Results from a Danish population-based twin study
    • DOI 10.1016/j.cccn.2004.06.017, PII S0009898104003262
    • Bathum L, Fagnani C, Christiansen L, Christensen K (2004) Heritability of biochemical kidney markers and relation to survival in the elderly-results from a Danish population-based twin study. Clin Chim Acta 349: 143-150 (Pubitemid 39311999)
    • (2004) Clinica Chimica Acta , vol.349 , Issue.1-2 , pp. 143-150
    • Bathum, L.1    Fagnani, C.2    Christiansen, L.3    Christensen, K.4
  • 4
    • 19144371287 scopus 로고    scopus 로고
    • NMR-based metabonomic approaches for evaluating physiological influences on biofluid composition
    • DOI 10.1002/nbm.935
    • Bollard M, Stanley E, Lindon J, Nicholson J, Holmes E (2005) NMR-based metabonomic approaches for evaluating physiological influences on biofluid composition. NMR Biomed 18: 143-162 (Pubitemid 40716122)
    • (2005) NMR in Biomedicine , vol.18 , Issue.3 , pp. 143-162
    • Bollard, M.E.1    Stanley, E.G.2    Lindon, J.C.3    Nicholson, J.K.4    Holmes, E.5
  • 8
    • 33745728718 scopus 로고    scopus 로고
    • Probabilistic quotient normalization as robust method to account for dilution of complex biological mixtures. Application in 1H NMR metabonomics
    • Dieterle F, Ross A, Schlotterbeck G, Senn H (2006) Probabilistic quotient normalization as robust method to account for dilution of complex biological mixtures. Application in 1H NMR metabonomics. Anal Chem 78: 4281-4290
    • (2006) Anal Chem , vol.78 , pp. 4281-4290
    • Dieterle, F.1    Ross, A.2    Schlotterbeck, G.3    Senn, H.4
  • 10
    • 77956780120 scopus 로고    scopus 로고
    • Measurement of dietary exposure: A challenging problem which may be overcome thanks to metabolomics?
    • Faveé G, Beckmann ME, Draper JH, Mathers JC (2009) Measurement of dietary exposure: a challenging problem which may be overcome thanks to metabolomics? Genes Nutr 4: 135-141
    • (2009) Genes Nutr , vol.4 , pp. 135-141
    • Faveé, G.1    Beckmann, M.E.2    Draper, J.H.3    Mathers, J.C.4
  • 11
    • 84867086419 scopus 로고    scopus 로고
    • Prior distributions for variance parameters in hierarchical models
    • Gelman A (2006) Prior distributions for variance parameters in hierarchical models. Bayesian Anal 1: 515-533
    • (2006) Bayesian Anal , vol.1 , pp. 515-533
    • Gelman, A.1
  • 14
    • 33646595378 scopus 로고    scopus 로고
    • The Cinderella story of metabolic profiling: Does metabolomics get to go to the functional genomics ball?
    • DOI 10.1098/rstb.2005.1734
    • Griffin J (2006) The Cinderella story of metabolic profiling: does metabolomics get to go to the functional genomics ball? Philos Trans R Soc Lond B Biol Sci 361: 147-161 (Pubitemid 44858949)
    • (2006) Philosophical Transactions of the Royal Society B: Biological Sciences , vol.361 , Issue.1465 , pp. 147-161
    • Griffin, J.L.1
  • 18
    • 0014365854 scopus 로고
    • A phosphate activated glutaminase in rat liver different from that in kidney and other tissues
    • Horowitz ML, Knox WE (1968) A phosphate activated glutaminase in rat liver different from that in kidney and other tissues. Enzymol Biol Clin (Basel) 9: 241-255
    • (1968) Enzymol Biol Clin (Basel) , vol.9 , pp. 241-255
    • Horowitz, M.L.1    Knox, W.E.2
  • 20
    • 18444410406 scopus 로고    scopus 로고
    • Empirical bayes selection of wavelet thresholds
    • DOI 10.1214/009053605000000345
    • Johnstone I, Silverman B (2005) Empirical Bayes selection of wavelet thresholds. Ann Stat 33: 1700-1752 (Pubitemid 41423984)
    • (2005) Annals of Statistics , vol.33 , Issue.4 , pp. 1700-1752
    • Johnstone, I.M.1    Silverman, B.W.2
  • 22
    • 33646475134 scopus 로고    scopus 로고
    • Probing gender-specific metabolism differences in humans by nuclear magnetic resonance-based metabonomics
    • Kochhar S, Jacobs D, Ramadan Z, Berruex F, Fuerholz A, Fay L (2006) Probing gender-specific metabolism differences in humans by nuclear magnetic resonance-based metabonomics. Anal Biochem 352: 274-281
    • (2006) Anal Biochem , vol.352 , pp. 274-281
    • Kochhar, S.1    Jacobs, D.2    Ramadan, Z.3    Berruex, F.4    Fuerholz, A.5    Fay, L.6
  • 23
    • 27844535769 scopus 로고    scopus 로고
    • 1H-nuclear magnetic spectroscopy followed by principal component analysis and hierarchical cluster analysis to demonstrate effects of statins on hyperlipidemic patients
    • DOI 10.1002/nbm.974
    • Le Moyec L, Valensi P, Charniot J-C, Hantz E, Albertini J-P (2005) Serum 1H-nuclear magnetic spectroscopy followed by principal component analysis and hierarchical cluster analysis to demonstrate effects of statins on hyperlipidemic patients. NMR Biomed 18: 421-429 (Pubitemid 41646183)
    • (2005) NMR in Biomedicine , vol.18 , Issue.7 , pp. 421-429
    • Le Moyec, L.1    Valensi, P.2    Charniot, J.-C.3    Hantz, E.4    Albertini, J.-P.5
  • 26
    • 66349087823 scopus 로고    scopus 로고
    • Spectroscopic and statistical techniques for information recovery in metabonomics and metabolomics
    • Lindon J, Nicholson J (2008) Spectroscopic and statistical techniques for information recovery in metabonomics and metabolomics. Annu Rev Anal Chem (Palo Alto, Calif) 1: 45-69
    • (2008) Annu Rev Anal Chem (Palo Alto, Calif) , vol.1 , pp. 45-69
    • Lindon, J.1    Nicholson, J.2
  • 27
    • 0030266441 scopus 로고    scopus 로고
    • High-resolution diffusion and relaxation edited one- and two-dimensional 1H NMR spectroscopy of biological fluids
    • Liu M, Nicholson JK, Lindon JC (1996) High-resolution diffusion and relaxation edited one- and two-dimensional 1H NMR spectroscopy of biological fluids. Anal Chem 68: 3370-3376
    • (1996) Anal Chem , vol.68 , pp. 3370-3376
    • Liu, M.1    Nicholson, J.K.2    Lindon, J.C.3
  • 28
    • 34547190179 scopus 로고    scopus 로고
    • 1H NMR spectroscopy-based metabolic phenotyping studies
    • DOI 10.1021/ac070212f
    • Maher A, Zirah S, Holmes E, Nicholson J (2007) Experimental and analytical variation in human urine in 1H NMR spectroscopy- based metabolic phenotyping studies. Anal Chem 79: 5204-5211 (Pubitemid 47121031)
    • (2007) Analytical Chemistry , vol.79 , Issue.14 , pp. 5204-5211
    • Maher, A.D.1    Zirah, S.F.M.2    Holmes, E.3    Nicholson, J.K.4
  • 29
    • 0030662348 scopus 로고    scopus 로고
    • A twin-pronged attack on complex traits
    • Martin N, Boomsma D, Machin G (1997) A twin-pronged attack on complex traits. Nat Genet 17: 387-392 (Pubitemid 27518385)
    • (1997) Nature Genetics , vol.17 , Issue.4 , pp. 387-392
    • Martin, N.1    Boomsma, D.2    Machin, G.3
  • 30
    • 0343284843 scopus 로고    scopus 로고
    • Metabolism of glutamine and glutamate in the liver-regulation and physiological significance
    • Kvamme E (ed) Boca Raton, FL, CRC Press, Inc
    • McGivan JD (1998) Metabolism of glutamine and glutamate in the liver-regulation and physiological significance. In Glutamine and Glutamate in Mammals, Kvamme E (ed), Vol. 1. Boca Raton, FL: CRC Press, Inc
    • (1998) Glutamine and Glutamate in Mammals , vol.1
    • McGivan, J.D.1
  • 31
    • 34249816372 scopus 로고    scopus 로고
    • Twin studies: Software and algorithms
    • Cooper DN (ed). London. Macmillan Publishers Ltd, Nature Publishing Group
    • Neale M (2001) Twin Studies: Software and Algorithms. In Encyclopedia of the Human Genome, Cooper DN (ed). London: Macmillan Publishers Ltd, Nature Publishing Group
    • (2001) Encyclopedia of the Human Genome
    • Neale, M.1
  • 33
    • 55249102706 scopus 로고    scopus 로고
    • The metabolome-wide association study: A new look at human disease risk factors
    • Nicholson J, Holmes E, Elliott P (2008) The metabolome-wide association study: a new look at human disease risk factors. J Proteome Res 7: 3637-3638
    • (2008) J Proteome Res , vol.7 , pp. 3637-3638
    • Nicholson, J.1    Holmes, E.2    Elliott, P.3
  • 34
    • 0020645974 scopus 로고
    • 1H n.m.r. studies of vertebrate blood and plasma
    • Nicholson JK, Buckingham MJ, Sadler PJ (1983) High resolution 1H n.m.r. studies of vertebrate blood and plasma. Biochem J 211: 605-615 (Pubitemid 13103190)
    • (1983) Biochemical Journal , vol.211 , Issue.3 , pp. 605-615
    • Nicholson, J.K.1    Buckingham, M.J.2    Sadler, P.J.3
  • 35
    • 0036463681 scopus 로고    scopus 로고
    • Metabonomics: A platform for studying drug toxicity and gene function
    • DOI 10.1038/nrd728
    • Nicholson JK, Connelly J, Lindon JC, Holmes E (2002) Metabonomics: a platform for studying drug toxicity and gene function. Nat Rev Drug Discov 1: 153-161 (Pubitemid 41646523)
    • (2002) Nature Reviews Drug Discovery , vol.1 , Issue.2 , pp. 153-161
    • Nicholson, J.K.1    Connelly, J.2    Lindon, J.C.3    Holmes, E.4
  • 37
    • 0032694577 scopus 로고    scopus 로고
    • Metabonomics: Understanding the metabolic responses of living systems to pathophysiological stimuli via multivariate statistical analysis of biological NMR spectroscopic data
    • Nicholson JK, Lindon JC, Holmes E (1999) Metabonomics: understanding the metabolic responses of living systems to pathophysiological stimuli via multivariate statistical analysis of biological NMR spectroscopic data. Xenobiotica 29: 1181-1189
    • (1999) Xenobiotica , vol.29 , pp. 1181-1189
    • Nicholson, J.K.1    Lindon, J.C.2    Holmes, E.3
  • 38
    • 0021321993 scopus 로고
    • Proton-nuclear-magnetic-resonance studies of serum, plasma and urine from fasting normal and diabetic subjects
    • Nicholson JK, OFlynn MP, Sadler PJ, Macleod AF, Juul SM, Sonksen PH (1984) Proton-nuclear-magnetic-resonance studies of serum, plasma and urine from fasting normal and diabetic subjects. Biochem J 217: 365-375 (Pubitemid 14178967)
    • (1984) Biochemical Journal , vol.217 , Issue.2 , pp. 365-375
    • Nicholson, J.K.1    O'Flynn, M.P.2    Sadler, P.J.3
  • 40
    • 0026442320 scopus 로고
    • Serum creatinine as an index of renal function: New insights into old concepts
    • Perrone RD, Madias NE, Levey AS (1992) Serum creatinine as an index of renal function: new insights into old concepts. Clin Chem 38: 1933-1953
    • (1992) Clin Chem , vol.38 , pp. 1933-1953
    • Perrone, R.D.1    Madias, N.E.2    Levey, A.S.3
  • 45
    • 33847368152 scopus 로고    scopus 로고
    • Nutritional metabonomics: Applications and perspectives
    • DOI 10.1021/pr060522z
    • Rezzi S, Ramadan Z, Fay L, Kochhar S (2007) Nutritional metabonomics: applications and perspectives. J Proteome Res 6: 513-525 (Pubitemid 46340155)
    • (2007) Journal of Proteome Research , vol.6 , Issue.2 , pp. 513-525
    • Rezzi, S.1    Ramadan, Z.2    Fay, L.B.3    Kochhar, S.4
  • 46
    • 0036596190 scopus 로고    scopus 로고
    • Analytic approaches to twin data using structural equation models
    • Rijsdijk F, Sham P (2002) Analytic approaches to twin data using structural equation models. Brief Bioinform 3: 119-133
    • (2002) Brief Bioinform , vol.3 , pp. 119-133
    • Rijsdijk, F.1    Sham, P.2
  • 47
    • 20544466649 scopus 로고    scopus 로고
    • Metabonomics in toxicology: A review
    • DOI 10.1093/toxsci/kfi102
    • Robertson DG (2005) Metabonomics in toxicology: a review. Toxicol Sci 85: 809-822 (Pubitemid 40846857)
    • (2005) Toxicological Sciences , vol.85 , Issue.2 , pp. 809-822
    • Robertson, D.G.1
  • 48
    • 0020674126 scopus 로고
    • Glutaminase in human platelets
    • DOI 10.1016/S0009-8981(83)80004-7
    • Sahai S (1983) Glutaminase in human platelets. Clin Chim Acta 127: 197-203 (Pubitemid 13175328)
    • (1983) Clinica Chimica Acta , vol.127 , Issue.2 , pp. 197-203
    • Sahai, S.1
  • 49
    • 0020566037 scopus 로고
    • Genetic control of platelet glutaminase: A twin study
    • Sahai S, Vogel F (1983) Genetic control of platelet glutaminase: a twin study. Hum Genet 63: 292-293 (Pubitemid 13061314)
    • (1983) Human Genetics , vol.63 , Issue.3 , pp. 292-293
    • Sahai, S.1    Vogel, F.2
  • 50
    • 36049042571 scopus 로고    scopus 로고
    • Variation of metabolites in normal human urine
    • DOI 10.1007/s11306-007-0091-1
    • Saude E, Adamko D, Rowe B, Marrie T, Sykes B (2007) Variation of metabolites in normal human urine. Metabolomics 3: 439-451 (Pubitemid 350090674)
    • (2007) Metabolomics , vol.3 , Issue.4 , pp. 439-451
    • Saude, E.J.1    Adamko, D.2    Rowe, B.H.3    Marrie, T.4    Sykes, B.D.5
  • 57
    • 10444232639 scopus 로고    scopus 로고
    • The use of linear mixed models to estimate variance components from data on twin pairs by maximum likelihood
    • DOI 10.1375/1369052042663742
    • Visscher P, Benyamin B, White I (2004) The use of linear mixed models to estimate variance components from data on twin pairs by maximum likelihood. Twin Res 7: 670-674 (Pubitemid 39643569)
    • (2004) Twin Research , vol.7 , Issue.6 , pp. 670-674
    • Visscher, P.M.1    Benyamin, B.2    White, I.3
  • 58
    • 0004053611 scopus 로고
    • John Wiley and Sons, Inc., New York, NY, USA
    • Voet D, Voet JG (1995) Biochemistry. John Wiley and Sons, Inc., New York, NY, USA
    • (1995) Biochemistry
    • Voet, D.1    Voet, J.G.2
  • 62
    • 0033935979 scopus 로고    scopus 로고
    • Creatine and creatinine metabolism
    • Wyss M, Kaddurah-Daouk R (2000) Creatine and creatinine metabolism. Physiol Rev 80: 1107-1213 (Pubitemid 30452013)
    • (2000) Physiological Reviews , vol.80 , Issue.3 , pp. 1107-1213
    • Wyss, M.1    Kaddurah-Daouk, R.2
  • 63
    • 67849106535 scopus 로고    scopus 로고
    • MetaboAnalyst: A web server for metabolomic data analysis and interpretation
    • Xia J, Psychogios N, Young N, Wishart D (2009) MetaboAnalyst: a web server for metabolomic data analysis and interpretation. Nucleic Acids Res 37: W652-W660
    • (2009) Nucleic Acids Res , vol.37
    • Xia, J.1    Psychogios, N.2    Young, N.3    Wishart, D.4
  • 65
    • 58549085747 scopus 로고    scopus 로고
    • 1H NMR-based metabonomic and pattern recognition analysis for detection of oral squamous cell carcinoma
    • Zhou J, Xu B, Huang J, Jia X, Xue J, Shi X, Xiao L, Li W (2009) 1H NMR-based metabonomic and pattern recognition analysis for detection of oral squamous cell carcinoma. Clin Chim Acta 401: 8-13
    • (2009) Clin Chim Acta , vol.401 , pp. 8-13
    • Zhou, J.1    Xu, B.2    Huang, J.3    Jia, X.4    Xue, J.5    Shi, X.6    Xiao, L.7    Li, W.8


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.