-
1
-
-
0030801002
-
Gapped BLAST and PSIBLAST: a new generation of protein database search programs
-
Altschul SF, Madden TL, Schäffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ. 1997. Gapped BLAST and PSIBLAST: a new generation of protein database search programs. Nucleic Acids Res 25: 3389-3402.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schäffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
2
-
-
38849128038
-
Identification and detection of Macrophomina phaseolina by using species-specific oligonucleotide primers and probe
-
Babu KB, Srivastava AK, Saxena AK, Arora DK. 2007. Identification and detection of Macrophomina phaseolina by using species-specific oligonucleotide primers and probe. Mycologia 99:733-739.
-
(2007)
Mycologia
, vol.99
, pp. 733-739
-
-
Babu, K.B.1
Srivastava, A.K.2
Saxena, A.K.3
Arora, D.K.4
-
3
-
-
34247533319
-
Molecular detection of Phytophthora ramorum by realtime polymerase chain reaction using TaqMan, SYBR Green, and molecular beacons
-
Bilodeau GJ, Lévesque CA, de Cock AWAM, Duchaine C, Brière S, Uribe P, Martin FN, Hamelin RC. 2007. Molecular detection of Phytophthora ramorum by realtime polymerase chain reaction using TaqMan, SYBR Green, and molecular beacons. Phytopathology 97: 632-642.
-
(2007)
Phytopathology
, vol.97
, pp. 632-642
-
-
Bilodeau, G.J.1
Lévesque, C.A.2
de Cock, A.W.A.M.3
Duchaine, C.4
Brière, S.5
Uribe, P.6
Martin, F.N.7
Hamelin, R.C.8
-
4
-
-
4544302449
-
A combination of baiting and different PCR formats, including measurement of real-time quantitative fluorescence, for the detection of Phytophthora fragariae in strawberry plants
-
Bonants PJM, van Gent-Pelzer MPE, Hooftman R, Cooke DEL, Guy DC, Duncan JM. 2004. A combination of baiting and different PCR formats, including measurement of real-time quantitative fluorescence, for the detection of Phytophthora fragariae in strawberry plants. Eur J Plant Pathol 110:689-702.
-
(2004)
Eur J Plant Pathol
, vol.110
, pp. 689-702
-
-
Bonants, P.J.M.1
van Gent-Pelzer, M.P.E.2
Hooftman, R.3
Cooke, D.E.L.4
Guy, D.C.5
Duncan, J.M.6
-
5
-
-
1642565081
-
Development of a real-time RT-PCR assay for the detection of potato spindle tuber viroid
-
Boonham N, Pérez LG, Mendez MS, Peralta EL, Blockley A, Walsh K, Barker I, Mumford RA. 2004. Development of a real-time RT-PCR assay for the detection of potato spindle tuber viroid. J Virol Methods 116:139-146.
-
(2004)
J Virol Methods
, vol.116
, pp. 139-146
-
-
Boonham, N.1
Pérez, L.G.2
Mendez, M.S.3
Peralta, E.L.4
Blockley, A.5
Walsh, K.6
Barker, I.7
Mumford, R.A.8
-
6
-
-
3743106734
-
Variations among the isolates of Rhizoctonia bataticola from different host plants
-
Byadgi AS, Hegde RK. 1985. Variations among the isolates of Rhizoctonia bataticola from different host plants. Indian Phytopathol 38:297-301.
-
(1985)
Indian Phytopathol
, vol.38
, pp. 297-301
-
-
Byadgi, A.S.1
Hegde, R.K.2
-
7
-
-
0001360196
-
Morphological instability in a chlorate medium of isolates of Macrophomina phaseolina from soybean and sorghum
-
Cloud GL, Rupe JC. 1991. Morphological instability in a chlorate medium of isolates of Macrophomina phaseolina from soybean and sorghum. Phytopathology 81: 892-895.
-
(1991)
Phytopathology
, vol.81
, pp. 892-895
-
-
Cloud, G.L.1
Rupe, J.C.2
-
8
-
-
3242732345
-
Real-time PCR: what relevance to plant studies?
-
Gachon C, Mingam A, Charrier B. 2004. Real-time PCR: what relevance to plant studies? J Exp Bot 55:1445-1454.
-
(2004)
J Exp Bot
, vol.55
, pp. 1445-1454
-
-
Gachon, C.1
Mingam, A.2
Charrier, B.3
-
9
-
-
1942453796
-
Conventional and real-time PCR-based assay for detecting pathogenic Alternaria brassicae in cruciferous seed
-
Guillemette T, Iacomi-Vasilescu B, Simoneau P. 2004. Conventional and real-time PCR-based assay for detecting pathogenic Alternaria brassicae in cruciferous seed. Plant Dis 88:490-496.
-
(2004)
Plant Dis
, vol.88
, pp. 490-496
-
-
Guillemette, T.1
Iacomi-Vasilescu, B.2
Simoneau, P.3
-
10
-
-
33947194925
-
A new cultivation independent approach to detect and monitor common Trichoderma species in soils
-
Hagn A, Wallisch S, Radl V, Munch JC, Schloter M. 2007. A new cultivation independent approach to detect and monitor common Trichoderma species in soils. J Microbiol Methods 69:86-92.
-
(2007)
J Microbiol Methods
, vol.69
, pp. 86-92
-
-
Hagn, A.1
Wallisch, S.2
Radl, V.3
Munch, J.C.4
Schloter, M.5
-
11
-
-
0032856437
-
Quantitative measurement of Stachybotrys chartarum conidia using real time detection of PCR products with the TaqMan fluorogenic probe system
-
Haugland RA, Vesper SJ, Wymer LJ. 1999. Quantitative measurement of Stachybotrys chartarum conidia using real time detection of PCR products with the TaqMan fluorogenic probe system. Mol Cell Probes 13:329-340.
-
(1999)
Mol Cell Probes
, vol.13
, pp. 329-340
-
-
Haugland, R.A.1
Vesper, S.J.2
Wymer, L.J.3
-
12
-
-
33747055048
-
TaqMan chemistry for Phytophthora ramorum detection and quantification, with a comparison of diagnostic methods
-
Hayden K, Ivors K, Wilkinson C, Garbelotto M. 2006. TaqMan chemistry for Phytophthora ramorum detection and quantification, with a comparison of diagnostic methods. Phytopathology 96:846-854.
-
(2006)
Phytopathology
, vol.96
, pp. 846-854
-
-
Hayden, K.1
Ivors, K.2
Wilkinson, C.3
Garbelotto, M.4
-
13
-
-
33748045492
-
Development of a one-step real-time polymerase chain reaction assay for diagnosis of Phytophthora ramorum
-
Hughes KJD, Tomlinson JA, Griffin RL, Boonham N, Inman AJ, Lane CR. 2006. Development of a one-step real-time polymerase chain reaction assay for diagnosis of Phytophthora ramorum. Phytopathology 96:975-981.
-
(2006)
Phytopathology
, vol.96
, pp. 975-981
-
-
Hughes, K.J.D.1
Tomlinson, J.A.2
Griffin, R.L.3
Boonham, N.4
Inman, A.J.5
Lane, C.R.6
-
14
-
-
8744297171
-
Realtime detection of Phytophthora nicotianae and P. citrophthora in citrus roots and soil
-
Ippolito A, Schena FNL, Ligorio VS, Yaseen T. 2004. Realtime detection of Phytophthora nicotianae and P. citrophthora in citrus roots and soil. Eur J Plant Pathol 110:833-843.
-
(2004)
Eur J Plant Pathol
, vol.110
, pp. 833-843
-
-
Ippolito, A.1
Schena, F.N.L.2
Ligorio, V.S.3
Yaseen, T.4
-
15
-
-
0037198116
-
Fingerprinting of diverse genomes using PCR with universal rice primers generated from repetitive sequence of Korean weedy rice
-
Kang HW, Park DS, Go SJ, Eun MY. 2002. Fingerprinting of diverse genomes using PCR with universal rice primers generated from repetitive sequence of Korean weedy rice. Mol Cells 13:281-287.
-
(2002)
Mol Cells
, vol.13
, pp. 281-287
-
-
Kang, H.W.1
Park, D.S.2
Go, S.J.3
Eun, M.Y.4
-
16
-
-
79960019437
-
Macrophomina phaseolina as causal agent for charcoal rot of sunflower
-
Khan SN. 2007. Macrophomina phaseolina as causal agent for charcoal rot of sunflower. Mycopathology 5(2):111-118.
-
(2007)
Mycopathology
, vol.5
, Issue.2
, pp. 111-118
-
-
Khan, S.N.1
-
17
-
-
47549110176
-
Quantitative real-time PCR effectively detects and quantifies colonization of sclerotia of Sclerotinia sclerotiorum by Trichoderma spp
-
Kim TG, Knudsen GR. 2008. Quantitative real-time PCR effectively detects and quantifies colonization of sclerotia of Sclerotinia sclerotiorum by Trichoderma spp. Appl Soil Ecol 40:100-108.
-
(2008)
Appl Soil Ecol
, vol.40
, pp. 100-108
-
-
Kim, T.G.1
Knudsen, G.R.2
-
18
-
-
0028893079
-
Interpreting variability among isolates of Macrophomina phaseolina in pathogenicity, pycnidium production and chlorate utilization
-
Mihail JD, Taylor SJ. 1995. Interpreting variability among isolates of Macrophomina phaseolina in pathogenicity, pycnidium production and chlorate utilization. Can J Bot 10:1596-1603.
-
(1995)
Can J Bot
, vol.10
, pp. 1596-1603
-
-
Mihail, J.D.1
Taylor, S.J.2
-
19
-
-
59849084991
-
Real-time PCR for quantification of eleven individual Fusarium species in cereals
-
Mogens N, Skaidre S, Linda KN, Irene L, Niels HS, Annemarie FJ. 2009. Real-time PCR for quantification of eleven individual Fusarium species in cereals. J Microbiol Methods 76:234-240.
-
(2009)
J Microbiol Methods
, vol.76
, pp. 234-240
-
-
Mogens, N.1
Skaidre, S.2
Linda, K.N.3
Irene, L.4
Niels, H.S.5
Annemarie, F.J.6
-
20
-
-
0001095815
-
Host preference co-related with chlorate resistance in Macrophomina phaseolina
-
Pearson CAS, Leslie JE, Schweak EW. 1987. Host preference co-related with chlorate resistance in Macrophomina phaseolina. Plant Disease 71:828-831.
-
(1987)
Plant Disease
, vol.71
, pp. 828-831
-
-
Pearson, C.A.S.1
Leslie, J.E.2
Schweak, E.W.3
-
21
-
-
0035125798
-
Quantification of Stachybotrys chartarum conidia in indoor dust using real time, fluorescent probe-based detection of PCR products
-
Roe J, Haugland RA, Vesper SJ, Wymer LJ. 2001. Quantification of Stachybotrys chartarum conidia in indoor dust using real time, fluorescent probe-based detection of PCR products. J Expos Anal Environ Epidemiol 11: 12-20.
-
(2001)
J Expos Anal Environ Epidemiol
, vol.11
, pp. 12-20
-
-
Roe, J.1
Haugland, R.A.2
Vesper, S.J.3
Wymer, L.J.4
-
22
-
-
42449133704
-
Real-time PCR for detection and quantification of the biocontrol agent Trichoderma atroviride strain SC1 in soil
-
Savazzini F, Longa CMO, Pertot I, Gessler C. 2008. Real-time PCR for detection and quantification of the biocontrol agent Trichoderma atroviride strain SC1 in soil. J Microbiol Methods 73:185-194.
-
(2008)
J Microbiol Methods
, vol.73
, pp. 185-194
-
-
Savazzini, F.1
Longa, C.M.O.2
Pertot, I.3
Gessler, C.4
-
23
-
-
0036759015
-
Real-time PCR and its application for rapid plant disease diagnostics
-
Schaad NW, Frederick RD. 2002. Real-time PCR and its application for rapid plant disease diagnostics. Can J Plant Pathol 24: 250-258.
-
(2002)
Can J Plant Pathol
, vol.24
, pp. 250-258
-
-
Schaad, N.W.1
Frederick, R.D.2
-
24
-
-
8744263850
-
Real-time quantitative PCR: a new technology to detect and study phytopathogenic and antagonistic fungi
-
Schena L, Nigro F, Ippolito A, Gallitelli D. 2004. Real-time quantitative PCR: a new technology to detect and study phytopathogenic and antagonistic fungi. Eur J Plant Pathol 110:893-908.
-
(2004)
Eur J Plant Pathol
, vol.110
, pp. 893-908
-
-
Schena, L.1
Nigro, F.2
Ippolito, A.3
Gallitelli, D.4
-
25
-
-
66749092402
-
Cutaneous infection caused by Macrophomina phaseolina in a child with acute myeloid leukemia
-
Srinivasan A, Wickes BL, Romanelli AM, Debelenko L, Rubnitz JE, Sutton DA, Thompson EH, Fothergill AW, Rinaldi MG, Hayden RT, Shenep JL. 2009. Cutaneous infection caused by Macrophomina phaseolina in a child with acute myeloid leukemia. J Clin Microbiol 47:1969-1972.
-
(2009)
J Clin Microbiol
, vol.47
, pp. 1969-1972
-
-
Srinivasan, A.1
Wickes, B.L.2
Romanelli, A.M.3
Debelenko, L.4
Rubnitz, J.E.5
Sutton, D.A.6
Thompson, E.H.7
Fothergill, A.W.8
Rinaldi, M.G.9
Hayden, R.T.10
Shenep, J.L.11
-
26
-
-
0033990048
-
Primer3 on the WWW for general users and for biologist programmers
-
Krawetz S, Misener S, eds. Totowa, New Jersey: Humana Press
-
Steve R, Helen JS. 2000. Primer3 on the WWW for general users and for biologist programmers. In: Krawetz S, Misener S, eds. Bioinformatics methods and protocols: Methods in molecular biology. Totowa, New Jersey: Humana Press. p 365-386.
-
(2000)
Bioinformatics methods and protocols: Methods in molecular biology
, pp. 365-386
-
-
Steve, R.1
Helen, J.S.2
-
27
-
-
47249146063
-
Disseminated fungal infection in a renal transplant recipient involving Macrophomina phaseolina and Scytalidium dimidiatum: case report and review of taxonomic changes among medically important members of the Botryosphaeriaceae
-
Tan DHS, Sigler L, Gibas CFC, Fong IW. 2008. Disseminated fungal infection in a renal transplant recipient involving Macrophomina phaseolina and Scytalidium dimidiatum: case report and review of taxonomic changes among medically important members of the Botryosphaeriaceae. Med Mycol 46: 285-292.
-
(2008)
Med Mycol
, vol.46
, pp. 285-292
-
-
Tan, D.H.S.1
Sigler, L.2
Gibas, C.F.C.3
Fong, I.W.4
-
28
-
-
34250882734
-
Faster, simpler, more specific methods for improved molecular detection of Phytophthora ramorum in the field
-
Tomlinson JA, Barker I, Boonham N. 2007. Faster, simpler, more specific methods for improved molecular detection of Phytophthora ramorum in the field. Appl Environ Microbiol 73:4040-4047.
-
(2007)
Appl Environ Microbiol
, vol.73
, pp. 4040-4047
-
-
Tomlinson, J.A.1
Barker, I.2
Boonham, N.3
-
29
-
-
33646005495
-
Real-time fluorescent PCR detection of Phytophthora ramorum and Phytophthora pseudosyringae using mitochondrial gene regions
-
Tooley PW, Martin FN, Carras MM, Frederick RD. 2006. Real-time fluorescent PCR detection of Phytophthora ramorum and Phytophthora pseudosyringae using mitochondrial gene regions. Phytopathology 96:336-345.
-
(2006)
Phytopathology
, vol.96
, pp. 336-345
-
-
Tooley, P.W.1
Martin, F.N.2
Carras, M.M.3
Frederick, R.D.4
-
30
-
-
0033944701
-
Detection of Ralstonia solanacearum strains with a quantitative, multiplex, real time, fluorogenic PCR (TaqMan) assay
-
Weller SA, Elphinstone JG, Smith NC, Boonham N, Stead DE. 2000. Detection of Ralstonia solanacearum strains with a quantitative, multiplex, real time, fluorogenic PCR (TaqMan) assay. Appl Environ Microbiol 66:2853-2858.
-
(2000)
Appl Environ Microbiol
, vol.66
, pp. 2853-2858
-
-
Weller, S.A.1
Elphinstone, J.G.2
Smith, N.C.3
Boonham, N.4
Stead, D.E.5
-
31
-
-
24944534978
-
Real-time PCR for mRNA quantitation
-
Wong ML, Medrano JF. 2005. Real-time PCR for mRNA quantitation. BioTechniques 39:75-85.
-
(2005)
BioTechniques
, vol.39
, pp. 75-85
-
-
Wong, M.L.1
Medrano, J.F.2
-
32
-
-
39049182024
-
Species-specific SCAR markers for authentication of Sinocalycanthus chinensis
-
Ye, Qian, Qiu Y, Quo Y, Chen J, Yang S, Zhao MFuC. 2006. Species-specific SCAR markers for authentication of Sinocalycanthus chinensis. J Zhejiang Univ Science B 7: 868-872.
-
(2006)
J Zhejiang Univ Science B
, vol.7
, pp. 868-872
-
-
Qian, Y.1
Qiu, Y.2
Quo, Y.3
Chen, J.4
Yang, S.5
Zhao, M.F.C.6
|