메뉴 건너뛰기




Volumn 40, Issue 1, 2008, Pages 100-108

Quantitative real-time PCR effectively detects and quantifies colonization of sclerotia of Sclerotinia sclerotiorum by Trichoderma spp.

Author keywords

Biocontrol; Biological control; Microbial ecology

Indexed keywords

FUNGI; SCLEROTINIA SCLEROTIORUM; TRICHODERMA;

EID: 47549110176     PISSN: 09291393     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.apsoil.2008.03.013     Document Type: Article
Times cited : (35)

References (46)
  • 1
    • 0000459448 scopus 로고
    • Source of primary inoculum and effects of temperature and moisture on infection of beans by Whetzelinia sclerotiorum
    • Abawi G.S., and Grogan R.G. Source of primary inoculum and effects of temperature and moisture on infection of beans by Whetzelinia sclerotiorum. Phytopathology 65 (1975) 300-309
    • (1975) Phytopathology , vol.65 , pp. 300-309
    • Abawi, G.S.1    Grogan, R.G.2
  • 2
    • 0000150551 scopus 로고
    • Ecology of Sclerotinia species
    • Adams P.B., and Ayers W.A. Ecology of Sclerotinia species. Phytopathology 69 (1979) 896-899
    • (1979) Phytopathology , vol.69 , pp. 896-899
    • Adams, P.B.1    Ayers, W.A.2
  • 3
    • 0001259135 scopus 로고
    • Recovery of fungi and arthropods from sclerotia of Sclerotinia sclerotiorum in Quebec muck soils
    • Anas O., and Reeleder R.D. Recovery of fungi and arthropods from sclerotia of Sclerotinia sclerotiorum in Quebec muck soils. Phytopathology 77 (1987) 327-331
    • (1987) Phytopathology , vol.77 , pp. 327-331
    • Anas, O.1    Reeleder, R.D.2
  • 4
    • 38249030102 scopus 로고
    • Consumption of sclerotia of Sclerotinia sclerotiorum by larvae of Bradysia coprophila: influence of soil factors and interactions between larvae and Trichoderma viride
    • Anas O., and Reeleder R.D. Consumption of sclerotia of Sclerotinia sclerotiorum by larvae of Bradysia coprophila: influence of soil factors and interactions between larvae and Trichoderma viride. Soil. Biol. Biochem. 20 (1988) 619-624
    • (1988) Soil. Biol. Biochem. , vol.20 , pp. 619-624
    • Anas, O.1    Reeleder, R.D.2
  • 5
    • 0041528199 scopus 로고    scopus 로고
    • Detection and quantification of Plectosphaerella cucumerina, a potential biological control agent of potato cyst nematodes, by using conventional PCR, real-time PCR, selective media, and baiting
    • Atkins S.D., Clark I.M., Sosnowska D., Hirsch P.R., and Kerry B.R. Detection and quantification of Plectosphaerella cucumerina, a potential biological control agent of potato cyst nematodes, by using conventional PCR, real-time PCR, selective media, and baiting. Appl. Environ. Microbiol. 69 (2003) 4788-4793
    • (2003) Appl. Environ. Microbiol. , vol.69 , pp. 4788-4793
    • Atkins, S.D.1    Clark, I.M.2    Sosnowska, D.3    Hirsch, P.R.4    Kerry, B.R.5
  • 6
    • 0033966761 scopus 로고    scopus 로고
    • Cotransformation of Trichoderma harzianum with β-glucuronidase and green fluorescent protein genes provides a useful tool for monitoring fungal growth and activity in natural soils
    • Bae Y.-S., and Knudsen G.R. Cotransformation of Trichoderma harzianum with β-glucuronidase and green fluorescent protein genes provides a useful tool for monitoring fungal growth and activity in natural soils. Appl. Environ. Microbiol. 66 (2000) 810-815
    • (2000) Appl. Environ. Microbiol. , vol.66 , pp. 810-815
    • Bae, Y.-S.1    Knudsen, G.R.2
  • 7
    • 0035115004 scopus 로고    scopus 로고
    • Influence of a fungus-feeding nematode on growth and biocontrol efficacy of Trichoderma harzianum
    • Bae Y.-S., and Knudsen G.R. Influence of a fungus-feeding nematode on growth and biocontrol efficacy of Trichoderma harzianum. Phytopathology 91 (2001) 301-306
    • (2001) Phytopathology , vol.91 , pp. 301-306
    • Bae, Y.-S.1    Knudsen, G.R.2
  • 8
    • 11844306606 scopus 로고    scopus 로고
    • Soil microbial biomass influence on growth and biocontrol efficacy of Trichoderma harzianum
    • Bae Y.S., and Knudsen G.R. Soil microbial biomass influence on growth and biocontrol efficacy of Trichoderma harzianum. Biol. Control. 32 (2005) 236-242
    • (2005) Biol. Control. , vol.32 , pp. 236-242
    • Bae, Y.S.1    Knudsen, G.R.2
  • 9
    • 0035048428 scopus 로고    scopus 로고
    • Research on biology and control of Sclerotinia diseases in Canada
    • Bardin S.D., and Huang H.C. Research on biology and control of Sclerotinia diseases in Canada. Can. J. Plant Pathol. 23 (2001) 88-98
    • (2001) Can. J. Plant Pathol. , vol.23 , pp. 88-98
    • Bardin, S.D.1    Huang, H.C.2
  • 10
    • 0000642442 scopus 로고
    • Influence of an antagonistic strain of Pseudomonas fluorescens on growth and ability of Trichoderma harzianum to colonize sclerotia of Sclerotinia sclerotiorum in soil
    • Bin L., Knudsen G.R., and Eschen D.J. Influence of an antagonistic strain of Pseudomonas fluorescens on growth and ability of Trichoderma harzianum to colonize sclerotia of Sclerotinia sclerotiorum in soil. Phytopathology 81 (1991) 994-1000
    • (1991) Phytopathology , vol.81 , pp. 994-1000
    • Bin, L.1    Knudsen, G.R.2    Eschen, D.J.3
  • 11
    • 0036527144 scopus 로고    scopus 로고
    • Analysis of internal transcribed spacer (ITS) regions of rRNA genes in fungal communities in a Southeastern U.S.
    • Buchan A., Newell S.Y., Moreta J.I.L., and Moran M.A. Analysis of internal transcribed spacer (ITS) regions of rRNA genes in fungal communities in a Southeastern U.S. Salt Marsh. Microb. Ecol. 43 (2002) 329
    • (2002) Salt Marsh. Microb. Ecol. , vol.43 , pp. 329
    • Buchan, A.1    Newell, S.Y.2    Moreta, J.I.L.3    Moran, M.A.4
  • 12
    • 0031829321 scopus 로고    scopus 로고
    • UP-PCR analysis and ITS1 ribotyping of strains of Trichoderma and Gliocladium
    • Bulat S.A., Lübeck M., Mironenko N., Jensen D.F., and Lübeck P.S. UP-PCR analysis and ITS1 ribotyping of strains of Trichoderma and Gliocladium. Mycol. Res. 102 (1998) 933-943
    • (1998) Mycol. Res. , vol.102 , pp. 933-943
    • Bulat, S.A.1    Lübeck, M.2    Mironenko, N.3    Jensen, D.F.4    Lübeck, P.S.5
  • 13
    • 0000258829 scopus 로고
    • Survival of Whetzelinia sclerotiorum and initial infection of dry edible beans in Western Nebraska
    • Cook G.E., Steadman J.R., and Boosalis M.G. Survival of Whetzelinia sclerotiorum and initial infection of dry edible beans in Western Nebraska. Phytopathology 65 (1975) 250-255
    • (1975) Phytopathology , vol.65 , pp. 250-255
    • Cook, G.E.1    Steadman, J.R.2    Boosalis, M.G.3
  • 14
    • 0033668781 scopus 로고    scopus 로고
    • Combined effects of Brassica napus seed meal and Trichoderma harzianum on two soilborne plant pathogens
    • Dandurand L.M., Mosher R.D., and Knudsen G.R. Combined effects of Brassica napus seed meal and Trichoderma harzianum on two soilborne plant pathogens. Can. J. Microbiol. 46 (2000) 1051-1057
    • (2000) Can. J. Microbiol. , vol.46 , pp. 1051-1057
    • Dandurand, L.M.1    Mosher, R.D.2    Knudsen, G.R.3
  • 15
    • 0000320450 scopus 로고
    • The abundance of Trichoderma propagules and the distribution of species in forest soils
    • Danielson R.M., and Davey C.B. The abundance of Trichoderma propagules and the distribution of species in forest soils. Soil. Biol. Biochem. 5 (1973) 485-494
    • (1973) Soil. Biol. Biochem. , vol.5 , pp. 485-494
    • Danielson, R.M.1    Davey, C.B.2
  • 16
    • 0001761793 scopus 로고
    • Pathogenicity of Trichoderma spp. on the sclerotia of Sclerotinia sclerotiorum
    • Dos Santos A.F., and Dhingra O.D. Pathogenicity of Trichoderma spp. on the sclerotia of Sclerotinia sclerotiorum. Can. J. Bot. 60 (1982) 472-475
    • (1982) Can. J. Bot. , vol.60 , pp. 472-475
    • Dos Santos, A.F.1    Dhingra, O.D.2
  • 17
    • 22144470189 scopus 로고    scopus 로고
    • Assessment of soil microbial community structure by use of taxon-specific quantitative PCR assays
    • Fierer N., Jackson J.A., Vilgalys R., and Jackson R.B. Assessment of soil microbial community structure by use of taxon-specific quantitative PCR assays. Appl. Environ. Microbiol. 71 (2005) 4117-4120
    • (2005) Appl. Environ. Microbiol. , vol.71 , pp. 4117-4120
    • Fierer, N.1    Jackson, J.A.2    Vilgalys, R.3    Jackson, R.B.4
  • 18
    • 0344211422 scopus 로고    scopus 로고
    • Direct quantification of fungal DNA from soil substrate using real-time PCR
    • Filion M., St-Arnaud M., and Jabaji-Hare S.H. Direct quantification of fungal DNA from soil substrate using real-time PCR. J. Microbiol. Methods 53 (2003) 67-76
    • (2003) J. Microbiol. Methods , vol.53 , pp. 67-76
    • Filion, M.1    St-Arnaud, M.2    Jabaji-Hare, S.H.3
  • 19
    • 0037301392 scopus 로고    scopus 로고
    • Quantification of Fusarium solani f. sp. phaseoli in mycorrhizal bean plants and surrounding mycorrhizosphere soil using real-time polymerase chain reaction and direct isolations on selective media
    • Filion M., St-Arnaud M., and Jabaji-Hare S.H. Quantification of Fusarium solani f. sp. phaseoli in mycorrhizal bean plants and surrounding mycorrhizosphere soil using real-time polymerase chain reaction and direct isolations on selective media. Phytopathology 93 (2003) 229-235
    • (2003) Phytopathology , vol.93 , pp. 229-235
    • Filion, M.1    St-Arnaud, M.2    Jabaji-Hare, S.H.3
  • 20
    • 9344235416 scopus 로고    scopus 로고
    • Detection and quantification of Fusarium solani f. sp. glycines in soybean roots with real-time quantitative polymerase chain reaction
    • Gao X., Jackson T.A., Lambert K.N., Li S., Hartman G.L., and Niblack T.L. Detection and quantification of Fusarium solani f. sp. glycines in soybean roots with real-time quantitative polymerase chain reaction. Plant Dis. 88 (2004) 1372-1380
    • (2004) Plant Dis. , vol.88 , pp. 1372-1380
    • Gao, X.1    Jackson, T.A.2    Lambert, K.N.3    Li, S.4    Hartman, G.L.5    Niblack, T.L.6
  • 21
    • 1942453796 scopus 로고    scopus 로고
    • Conventional and real-time PCR-based assay for detecting pathogenic Alternaria brassicae in cruciferous seed
    • Guillemette T., Iacomi-Vasilescu B., and Simoneau P. Conventional and real-time PCR-based assay for detecting pathogenic Alternaria brassicae in cruciferous seed. Plant Dis. 88 (2004) 490-496
    • (2004) Plant Dis. , vol.88 , pp. 490-496
    • Guillemette, T.1    Iacomi-Vasilescu, B.2    Simoneau, P.3
  • 22
    • 0037378319 scopus 로고    scopus 로고
    • Germination of Sclerotinia minor and S. sclerotiorum sclerotia under various soil moisture and temperature combinations
    • Hao J.J., Subbarao K.V., and Duniway J.M. Germination of Sclerotinia minor and S. sclerotiorum sclerotia under various soil moisture and temperature combinations. Phytopathology 93 (2003) 443-450
    • (2003) Phytopathology , vol.93 , pp. 443-450
    • Hao, J.J.1    Subbarao, K.V.2    Duniway, J.M.3
  • 23
    • 0027477487 scopus 로고
    • Electrophoretic karyotype and gene assignment to resolved chromosomes of Trichoderma spp
    • Herrera-Estrella A., Goldman G.H., Van Montagu M., and Geremia R.A. Electrophoretic karyotype and gene assignment to resolved chromosomes of Trichoderma spp. Mol. Microbiol. 7 (1993) 515-521
    • (1993) Mol. Microbiol. , vol.7 , pp. 515-521
    • Herrera-Estrella, A.1    Goldman, G.H.2    Van Montagu, M.3    Geremia, R.A.4
  • 24
    • 15744381713 scopus 로고
    • Kinetic PCR analysis: real-time monitoring of DNA amplification reactions
    • Higuchi R., Fockler C., Dollinger G., and Watson R. Kinetic PCR analysis: real-time monitoring of DNA amplification reactions. Biotechnology 11 (1993) 1026-1030
    • (1993) Biotechnology , vol.11 , pp. 1026-1030
    • Higuchi, R.1    Fockler, C.2    Dollinger, G.3    Watson, R.4
  • 26
    • 0030431346 scopus 로고    scopus 로고
    • Hyphal interaction between Trichoderma harzianum and Sclerotinia sclerotiorum and its role in biological control
    • Inbar J., Menendez A., and Chet I. Hyphal interaction between Trichoderma harzianum and Sclerotinia sclerotiorum and its role in biological control. Soil. Biol. Biochem. 28 (1996) 757-763
    • (1996) Soil. Biol. Biochem. , vol.28 , pp. 757-763
    • Inbar, J.1    Menendez, A.2    Chet, I.3
  • 27
    • 0033815609 scopus 로고    scopus 로고
    • Selection of mycoparasites of sclerotia of Sclerotinia sclerotiorum isolated from New Zealand soils
    • Jones E.E., and Stewart A. Selection of mycoparasites of sclerotia of Sclerotinia sclerotiorum isolated from New Zealand soils. N. Z. J. Crop Hortic. Sci. 28 (2000) 105-114
    • (2000) N. Z. J. Crop Hortic. Sci. , vol.28 , pp. 105-114
    • Jones, E.E.1    Stewart, A.2
  • 28
    • 0032144592 scopus 로고    scopus 로고
    • Phylogeny of the genus Trichoderma based on sequence analysis of the internal transcribed spacer region 1 of the rDNA cluster
    • Kindermann J., El-Ayouti Y., Samuels G.J., and Kubicek C.P. Phylogeny of the genus Trichoderma based on sequence analysis of the internal transcribed spacer region 1 of the rDNA cluster. Fungal Genet. Biol. 24 (1998) 298-309
    • (1998) Fungal Genet. Biol. , vol.24 , pp. 298-309
    • Kindermann, J.1    El-Ayouti, Y.2    Samuels, G.J.3    Kubicek, C.P.4
  • 29
    • 0001654643 scopus 로고
    • Effects of temperature, soil moisture, and wheat bran on growth of Trichoderma harzianum from alginate pellets
    • Knudsen G.R., and Bin L. Effects of temperature, soil moisture, and wheat bran on growth of Trichoderma harzianum from alginate pellets. Phytopathology 80 (1990) 724-727
    • (1990) Phytopathology , vol.80 , pp. 724-727
    • Knudsen, G.R.1    Bin, L.2
  • 30
    • 0000467409 scopus 로고
    • Potential for biocontrol of Sclerotinia sclerotiorum through colonization of sclerotia by Trichoderma harzianum
    • Knudsen G.R., Eschen D.J., Dandurand L.M., and Bin L. Potential for biocontrol of Sclerotinia sclerotiorum through colonization of sclerotia by Trichoderma harzianum. Plant Dis. 75 (1991) 446-470
    • (1991) Plant Dis. , vol.75 , pp. 446-470
    • Knudsen, G.R.1    Eschen, D.J.2    Dandurand, L.M.3    Bin, L.4
  • 31
    • 0034106296 scopus 로고    scopus 로고
    • Influence of water potential on growth, enzyme secretion and in vitro enzyme activities of Trichoderma harzianum at different temperatures
    • Kredics L., Antal Z., and Manczinger L. Influence of water potential on growth, enzyme secretion and in vitro enzyme activities of Trichoderma harzianum at different temperatures. Curr. Microbiol. 40 (2000) 310-314
    • (2000) Curr. Microbiol. , vol.40 , pp. 310-314
    • Kredics, L.1    Antal, Z.2    Manczinger, L.3
  • 33
    • 0030993696 scopus 로고    scopus 로고
    • Revision of Trichoderma sect. Longibrachiatum including related teleomorphs based on analysis of ribosomal DNA internal transcribed spacer sequences
    • Kuhls K., Lieckfeldt E., Samuels G.J., Meyer W., Kubicek C.P., and Börner T. Revision of Trichoderma sect. Longibrachiatum including related teleomorphs based on analysis of ribosomal DNA internal transcribed spacer sequences. Mycologia 89 (1997) 442-460
    • (1997) Mycologia , vol.89 , pp. 442-460
    • Kuhls, K.1    Lieckfeldt, E.2    Samuels, G.J.3    Meyer, W.4    Kubicek, C.P.5    Börner, T.6
  • 34
    • 0001980125 scopus 로고
    • Effect of water potential on fungal growth and turgor
    • Luard E.J., and Griffin D.M. Effect of water potential on fungal growth and turgor. Trans. Br. Mycol. Soc. 76 (1981) 33-40
    • (1981) Trans. Br. Mycol. Soc. , vol.76 , pp. 33-40
    • Luard, E.J.1    Griffin, D.M.2
  • 35
    • 0036038067 scopus 로고    scopus 로고
    • Ecophysiology and saprophytic ability of Trichoderma spp
    • Lupo S., Dupont J., and Bettucci L. Ecophysiology and saprophytic ability of Trichoderma spp. Cryptogamie Mycol. 23 (2002) 71-80
    • (2002) Cryptogamie Mycol. , vol.23 , pp. 71-80
    • Lupo, S.1    Dupont, J.2    Bettucci, L.3
  • 36
    • 0002085519 scopus 로고
    • Effects of water potential and temperature on spore germination and germ-tube growth in vitro and on straw leaf sheaths
    • Magan N. Effects of water potential and temperature on spore germination and germ-tube growth in vitro and on straw leaf sheaths. Trans. Br. Mycol. Soc. 90 (1988) 97-107
    • (1988) Trans. Br. Mycol. Soc. , vol.90 , pp. 97-107
    • Magan, N.1
  • 37
    • 0035051944 scopus 로고    scopus 로고
    • Taxon-specific oligonucleotide primers for detection of Glomus etunicatum
    • Millner P.D., Mulbry W.W., and Reynolds S.L. Taxon-specific oligonucleotide primers for detection of Glomus etunicatum. Mycorrhiza 10 (2001) 259-265
    • (2001) Mycorrhiza , vol.10 , pp. 259-265
    • Millner, P.D.1    Mulbry, W.W.2    Reynolds, S.L.3
  • 38
    • 0006935918 scopus 로고
    • An in vitro test for evaluating efficacy of mycoparasites on sclerotia of Sclerotinia sclerotiorum
    • Mueller J.D., Cline M.N., Sinclair B.J., and Jacobsen B.J. An in vitro test for evaluating efficacy of mycoparasites on sclerotia of Sclerotinia sclerotiorum. Plant Dis. 69 (1985) 584-587
    • (1985) Plant Dis. , vol.69 , pp. 584-587
    • Mueller, J.D.1    Cline, M.N.2    Sinclair, B.J.3    Jacobsen, B.J.4
  • 39
    • 0036146824 scopus 로고    scopus 로고
    • Determination of bacterial load by real-time PCR using a broad-range (universal) probe and primers set
    • Nadkarni M.A., Martin F.E., Jacques N.A., and Hunter N. Determination of bacterial load by real-time PCR using a broad-range (universal) probe and primers set. Microbiology 148 (2002) 257-266
    • (2002) Microbiology , vol.148 , pp. 257-266
    • Nadkarni, M.A.1    Martin, F.E.2    Jacques, N.A.3    Hunter, N.4
  • 40
    • 9644302953 scopus 로고    scopus 로고
    • Use of green fluorescent protein and image analysis to quantify proliferation of Trichoderma harzianum in nonsterile soil
    • Orr K.A., and Knudsen G.R. Use of green fluorescent protein and image analysis to quantify proliferation of Trichoderma harzianum in nonsterile soil. Phytopathology 94 (2004) 1383-1389
    • (2004) Phytopathology , vol.94 , pp. 1383-1389
    • Orr, K.A.1    Knudsen, G.R.2
  • 41
    • 0032895798 scopus 로고    scopus 로고
    • Molecular phylogenetic analyses of biological control strains of Trichoderma harzianum and other biotypes of Trichoderma spp. associated with mushroom green mold
    • Ospina-Giraldo M.D., Royse D.J., Chen X., and Romaine C.P. Molecular phylogenetic analyses of biological control strains of Trichoderma harzianum and other biotypes of Trichoderma spp. associated with mushroom green mold. Phytopathology 89 (1999) 308-313
    • (1999) Phytopathology , vol.89 , pp. 308-313
    • Ospina-Giraldo, M.D.1    Royse, D.J.2    Chen, X.3    Romaine, C.P.4
  • 42
    • 0002096967 scopus 로고
    • Trichoderma and Gliocladium: biology, ecology, and potential for biocontrol
    • Papavizas G.C. Trichoderma and Gliocladium: biology, ecology, and potential for biocontrol. Ann. Rev. Phytopathol. 23 (1985) 23-54
    • (1985) Ann. Rev. Phytopathol. , vol.23 , pp. 23-54
    • Papavizas, G.C.1
  • 43
    • 0002993153 scopus 로고
    • Strategies in fungal ecology
    • Pugh G.J. Strategies in fungal ecology. Trans. Br. Mycol. Soc. 75 (1980) 1-14
    • (1980) Trans. Br. Mycol. Soc. , vol.75 , pp. 1-14
    • Pugh, G.J.1
  • 44
    • 0000041874 scopus 로고
    • Sclerotinia sclerotiorum: History, diseases and symptomatology, host range, geographic distribution, and impact
    • Purdy L.H. Sclerotinia sclerotiorum: History, diseases and symptomatology, host range, geographic distribution, and impact. Phytopathology 69 (1979) 875-880
    • (1979) Phytopathology , vol.69 , pp. 875-880
    • Purdy, L.H.1
  • 45
    • 0032905228 scopus 로고    scopus 로고
    • Development of a high-throughput quantitative assay for detecting herpes simplex virus DNA in clinical samples
    • Ryncarz A.J., Goddaro J., Wald A., Huang M.-L., Roizman B., and Corey L. Development of a high-throughput quantitative assay for detecting herpes simplex virus DNA in clinical samples. Appl. Environ. Microbiol. 37 (1999) 1941-1947
    • (1999) Appl. Environ. Microbiol. , vol.37 , pp. 1941-1947
    • Ryncarz, A.J.1    Goddaro, J.2    Wald, A.3    Huang, M.-L.4    Roizman, B.5    Corey, L.6
  • 46
    • 0036144275 scopus 로고    scopus 로고
    • Simultaneous one-tube quantification of host and pathogen DNA with real-time polymerase chain reaction
    • Winton L.M., Stone J.K., Watrud L.S., and Hansen E.M. Simultaneous one-tube quantification of host and pathogen DNA with real-time polymerase chain reaction. Phytopathology 92 (2002) 112-116
    • (2002) Phytopathology , vol.92 , pp. 112-116
    • Winton, L.M.1    Stone, J.K.2    Watrud, L.S.3    Hansen, E.M.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.