-
1
-
-
24144475284
-
Reversing histone methylation
-
Bannister AJ, Kouzarides T. 2005. Reversing histone methylation. Nature 436: 1103-1106.
-
(2005)
Nature
, vol.436
, pp. 1103-1106
-
-
Bannister, A.J.1
Kouzarides, T.2
-
2
-
-
34249026300
-
High-resolution profiling of histone methylations in the human
-
Barski A, Cuddapah S, Cui K, et al. 2007. High-resolution profiling of histone methylations in the human. Cell 129: 823-837.
-
(2007)
Cell
, vol.129
, pp. 823-837
-
-
Barski, A.1
Cuddapah, S.2
Cui, K.3
-
3
-
-
0037172993
-
Methylation of histone H3 Lys4 in coding regions of active genes
-
Bernstein BE, Humphrey EL, Erlich RL, et al. 2002. Methylation of histone H3 Lys4 in coding regions of active genes. Proc Natl Acad Sci USA 99: 8695-8700.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 8695-8700
-
-
Bernstein, B.E.1
Humphrey, E.L.2
Erlich, R.L.3
-
4
-
-
0035893240
-
Histone H3 lysine 4 methylation is mediated by Set1 and required for cell growth and rDNA silencing in Saccharomyces cerevisiae
-
Briggs SD, Bryk M, Strahl BD, et al. 2001. Histone H3 lysine 4 methylation is mediated by Set1 and required for cell growth and rDNA silencing in Saccharomyces cerevisiae. Genes Dev 15: 3286-3295.
-
(2001)
Genes Dev
, vol.15
, pp. 3286-3295
-
-
Briggs, S.D.1
Bryk, M.2
Strahl, B.D.3
-
5
-
-
78650747491
-
Discovery and characterization of chromatin states for systematic annotation of the human genome
-
Ernst J, Kellis M. 2010. Discovery and characterization of chromatin states for systematic annotation of the human genome. Nat Biotechnol 28: 817-825.
-
(2010)
Nat Biotechnol
, vol.28
, pp. 817-825
-
-
Ernst, J.1
Kellis, M.2
-
6
-
-
37349005942
-
Combinatorial effects of four histone modifications in transcription and differentiation
-
Fischer JJ, Toedling J, Krueger T, et al. 2008. Combinatorial effects of four histone modifications in transcription and differentiation. Genomics 91: 41-51.
-
(2008)
Genomics
, vol.91
, pp. 41-51
-
-
Fischer, J.J.1
Toedling, J.2
Krueger, T.3
-
7
-
-
79151470871
-
Influence of combinatorial histone modifications on antibody and effector protein recognition
-
Fuchs SM, Krajewski K, Baker RW, et al. 2011. Influence of combinatorial histone modifications on antibody and effector protein recognition. Curr Biol 21: 53-58.
-
(2011)
Curr Biol
, vol.21
, pp. 53-58
-
-
Fuchs, S.M.1
Krajewski, K.2
Baker, R.W.3
-
9
-
-
0030797349
-
Yeast Gcn5 functions in two multisubunit complexes to acetylate nucleosomal histones: characterization of an Ada complex and the SAGA (Spt/Ada) complex
-
Grant PA, Duggan L, Côté J, et al. 1997. Yeast Gcn5 functions in two multisubunit complexes to acetylate nucleosomal histones: characterization of an Ada complex and the SAGA (Spt/Ada) complex. Genes Dev 11: 1640-1650.
-
(1997)
Genes Dev
, vol.11
, pp. 1640-1650
-
-
Grant, P.A.1
Duggan, L.2
Côté, J.3
-
10
-
-
34447098370
-
A chromatin landmark and transcription initiation at most promoters in human cells
-
Guenther MG, Levine SS, Boyer LA, et al. 2007. A chromatin landmark and transcription initiation at most promoters in human cells. Cell 130: 77-88.
-
(2007)
Cell
, vol.130
, pp. 77-88
-
-
Guenther, M.G.1
Levine, S.S.2
Boyer, L.A.3
-
11
-
-
34249761849
-
Learning Bayesian networks: the combination of knowledge and statistical data
-
Heckerman D, Geiger D. 1995. Learning Bayesian networks: the combination of knowledge and statistical data. Mach Learn 20: 197-243.
-
(1995)
Mach Learn
, vol.20
, pp. 197-243
-
-
Heckerman, D.1
Geiger, D.2
-
12
-
-
65549104157
-
Histone modifications at human enhancers reflect global cell-type-specific gene expression
-
Heintzman ND, Hon GC, Hawkins RD, et al. 2009. Histone modifications at human enhancers reflect global cell-type-specific gene expression. Nature 459: 108-112.
-
(2009)
Nature
, vol.459
, pp. 108-112
-
-
Heintzman, N.D.1
Hon, G.C.2
Hawkins, R.D.3
-
13
-
-
0035432099
-
The bromodomain: a regulator of ATP-dependent chromatin remodelling?
-
Horn PJ, Peterson CL. 2001. The bromodomain: a regulator of ATP-dependent chromatin remodelling? Front Biosci 6: D1019-1023.
-
(2001)
Front Biosci
, vol.6
-
-
Horn, P.J.1
Peterson, C.L.2
-
14
-
-
67650330565
-
-
Spatial clustering of multivariate genomic and epigenomic information. In Proceedings of the 13th Annual International Conference on Research in Computational Molecular Biology. Springer-Verlag: Godalming.
-
Jaschek R, Tanay A. 2009. Spatial clustering of multivariate genomic and epigenomic information. In Proceedings of the 13th Annual International Conference on Research in Computational Molecular Biology. Springer-Verlag: Godalming; 170-183.
-
(2009)
, pp. 170-183
-
-
Jaschek, R.1
Tanay, A.2
-
15
-
-
0034657420
-
The something about silencing protein, Sas3, is the catalytic subunit of NuA3, a TAF(II)30-containing HAT complex that interacts with the Spt16 subunit of the yeast CP (Cdc68/Pob3)-FACT complex
-
John S, Howe L, Tafrov ST, et al. 2000. The something about silencing protein, Sas3, is the catalytic subunit of NuA3, a TAF(II)30-containing HAT complex that interacts with the Spt16 subunit of the yeast CP (Cdc68/Pob3)-FACT complex. Genes Dev 14: 1196-1208.
-
(2000)
Genes Dev
, vol.14
, pp. 1196-1208
-
-
John, S.1
Howe, L.2
Tafrov, S.T.3
-
16
-
-
80052286672
-
-
Investigating histone methylation in yeast: regulation of H3K4me3, and the role of the methyl-histone binding domains of Isw1b. Masters Degree Thesis, University of Calgary, Canada.
-
Johnson I. 2010. Investigating histone methylation in yeast: regulation of H3K4me3, and the role of the methyl-histone binding domains of Isw1b. Masters Degree Thesis, University of Calgary, Canada; 26-30.
-
(2010)
, pp. 26-30
-
-
Johnson, I.1
-
17
-
-
13544271154
-
Mass spectrometry analysis of Arabidopsis histone H3 reveals distinct combinations of post-translational modifications
-
Johnson L, Mollah S, Garcia BA, et al. 2004. Mass spectrometry analysis of Arabidopsis histone H3 reveals distinct combinations of post-translational modifications. Nucleic Acids Res 32: 6511-6518.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 6511-6518
-
-
Johnson, L.1
Mollah, S.2
Garcia, B.A.3
-
19
-
-
0033529565
-
Twenty-five years of the nucleosome, fundamental particle of the eukaryote chromosome
-
Kornberg RD, Lorch Y. 1999. Twenty-five years of the nucleosome, fundamental particle of the eukaryote chromosome. Cell 98: 285-294.
-
(1999)
Cell
, vol.98
, pp. 285-294
-
-
Kornberg, R.D.1
Lorch, Y.2
-
20
-
-
33847076849
-
Chromatin modifications and their function
-
Kouzarides T. 2007. Chromatin modifications and their function. Cell 128: 693-705.
-
(2007)
Cell
, vol.128
, pp. 693-705
-
-
Kouzarides, T.1
-
21
-
-
0037979272
-
Methylation of histone H3 by Set2 in Saccharomyces cerevisiae is linked to transcriptional elongation by RNA polymerase II
-
Krogan NJ, Kim M, Tong A, et al. 2003. Methylation of histone H3 by Set2 in Saccharomyces cerevisiae is linked to transcriptional elongation by RNA polymerase II. Mol Cell Biol 23: 4207-4218.
-
(2003)
Mol Cell Biol
, vol.23
, pp. 4207-4218
-
-
Krogan, N.J.1
Kim, M.2
Tong, A.3
-
22
-
-
0032142918
-
Roles of histone acetyltransferases and deacetylases in gene regulation
-
Kuo MH, Allis CD. 1998. Roles of histone acetyltransferases and deacetylases in gene regulation. Bioessays 20: 615-626.
-
(1998)
Bioessays
, vol.20
, pp. 615-626
-
-
Kuo, M.H.1
Allis, C.D.2
-
24
-
-
2942518343
-
Mapping global Histone acetylation patterns to gene expression
-
Kurdistani SK, Tavazoie S, Grunstein M. 2004. Mapping global Histone acetylation patterns to gene expression. Cell 117: 721-733.
-
(2004)
Cell
, vol.117
, pp. 721-733
-
-
Kurdistani, S.K.1
Tavazoie, S.2
Grunstein, M.3
-
25
-
-
33947532026
-
Histone acetyltransferase complexes: one size doesn't fit all
-
Lee KK, Workman JL. 2007. Histone acetyltransferase complexes: one size doesn't fit all. Nat Rev Mol Cell Biol 8: 284-295.
-
(2007)
Nat Rev Mol Cell Biol
, vol.8
, pp. 284-295
-
-
Lee, K.K.1
Workman, J.L.2
-
26
-
-
26444508841
-
Single-nucleosome mapping of histone modifications in S. cerevisiae
-
Liu CL, Kaplan T, Kim M, et al. 2005. Single-nucleosome mapping of histone modifications in S. cerevisiae. PLoS Biol 3: e328.
-
(2005)
PLoS Biol
, vol.3
-
-
Liu, C.L.1
Kaplan, T.2
Kim, M.3
-
27
-
-
27644589675
-
The diverse functions of histone lysine methylation
-
Martin C, Zhang Y. 2005. The diverse functions of histone lysine methylation. Nat Rev Mol Cell Biol 6: 838-849.
-
(2005)
Nat Rev Mol Cell Biol
, vol.6
, pp. 838-849
-
-
Martin, C.1
Zhang, Y.2
-
28
-
-
0035818465
-
COMPASS: a complex of proteins associated with a trithorax-related SET domain protein
-
Miller T, Krogan NJ, Dover J, et al. 2001. COMPASS: a complex of proteins associated with a trithorax-related SET domain protein. Proc Natl Acad Sci USA 98: 12902-12907.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 12902-12907
-
-
Miller, T.1
Krogan, N.J.2
Dover, J.3
-
29
-
-
0344022572
-
Targeted recruitment of Set1 histone methylase by elongating Pol II provides a localized mark and memory of recent transcriptional activity
-
Ng HH, Robert F, Young RA, Struhl K. 2003. Targeted recruitment of Set1 histone methylase by elongating Pol II provides a localized mark and memory of recent transcriptional activity. Mol Cell 11: 709-719.
-
(2003)
Mol Cell
, vol.11
, pp. 709-719
-
-
Ng, H.H.1
Robert, F.2
Young, R.A.3
Struhl, K.4
-
30
-
-
23944462969
-
Genome-wide map of nucleosome acetylation and methylation in yeast
-
Pokholok DK, Harbison CT, Levine S, et al. 2005. Genome-wide map of nucleosome acetylation and methylation in yeast. Cell 122: 517-527.
-
(2005)
Cell
, vol.122
, pp. 517-527
-
-
Pokholok, D.K.1
Harbison, C.T.2
Levine, S.3
-
31
-
-
13444267442
-
Chd1 chromodomain links histone H3 methylation with SAGA- and SLIK-dependent acetylation
-
Pray-Grant MG, Daniel JA, Schieltz D, et al. 2005. Chd1 chromodomain links histone H3 methylation with SAGA- and SLIK-dependent acetylation. Nature 433: 434-438.
-
(2005)
Nature
, vol.433
, pp. 434-438
-
-
Pray-Grant, M.G.1
Daniel, J.A.2
Schieltz, D.3
-
32
-
-
39549110425
-
The Sas3p and Gcn5p histone acetyltransferases are recruited to similar genes
-
Rosaleny LE, Ruiz-García AB, García-Martínez J, et al. 2007. The Sas3p and Gcn5p histone acetyltransferases are recruited to similar genes. Genome Biol 8: R119.
-
(2007)
Genome Biol
, vol.8
-
-
Rosaleny, L.E.1
Ruiz-García, A.B.2
García-Martínez, J.3
-
33
-
-
70350314172
-
Bayesian networks of customer satisfaction survey data
-
Saliniand S, Kenett RS. 2009. Bayesian networks of customer satisfaction survey data. J Appl Stat 36: 1177-1189.
-
(2009)
J Appl Stat
, vol.36
, pp. 1177-1189
-
-
Saliniand, S.1
Kenett, R.S.2
-
34
-
-
0037074010
-
Signaling network model of chromatin
-
Schreiber SL, Bernstein BE. 2002. Signaling network model of chromatin. Cell 111: 771-778.
-
(2002)
Cell
, vol.111
, pp. 771-778
-
-
Schreiber, S.L.1
Bernstein, B.E.2
-
35
-
-
0034610814
-
The language of covalent histone modifications
-
Strahl BD, Allis CD. 2000. The language of covalent histone modifications. Nature 403: 41-45.
-
(2000)
Nature
, vol.403
, pp. 41-45
-
-
Strahl, B.D.1
Allis, C.D.2
-
36
-
-
33751527233
-
Yng1 PHD finger binding to H3 trimethylated at K4 promotes NuA3 HAT activity at K14 of H3 and transcription at a subset of targeted ORFs
-
Taverna SD, Ilin S, Rogers RS, et al. 2006. Yng1 PHD finger binding to H3 trimethylated at K4 promotes NuA3 HAT activity at K14 of H3 and transcription at a subset of targeted ORFs. Mol Cell 24: 785-796.
-
(2006)
Mol Cell
, vol.24
, pp. 785-796
-
-
Taverna, S.D.1
Ilin, S.2
Rogers, R.S.3
-
37
-
-
0033848849
-
Histone acetylation and an epigenetic code
-
Turner BM. 2000. Histone acetylation and an epigenetic code. Bioessays 22: 836-845.
-
(2000)
Bioessays
, vol.22
, pp. 836-845
-
-
Turner, B.M.1
-
38
-
-
79961186157
-
Combinatorial chromatin modification patterns in the human genome revealed by subspace clustering
-
Ucar D, Hu Q, Tan K. 2011. Combinatorial chromatin modification patterns in the human genome revealed by subspace clustering. Nucleic Acids Res 39: 1-13.
-
(2011)
Nucleic Acids Res
, vol.39
, pp. 1-13
-
-
Ucar, D.1
Hu, Q.2
Tan, K.3
-
39
-
-
46249112085
-
Combinatorial patterns of histone acetylations and methylations in the human genome
-
Wang ZB, Zang CZ, Rosenfeld JA, et al. 2008. Combinatorial patterns of histone acetylations and methylations in the human genome. Nat Genet 40: 897-903.
-
(2008)
Nat Genet
, vol.40
, pp. 897-903
-
-
Wang, Z.B.1
Zang, C.Z.2
Rosenfeld, J.A.3
-
40
-
-
48949099045
-
Inferring causal relationships among different histone modifications and gene expression
-
Yu H, Zhu S, Zhou B, et al. 2008. Inferring causal relationships among different histone modifications and gene expression. Genome Res 18: 1314-1324.
-
(2008)
Genome Res
, vol.18
, pp. 1314-1324
-
-
Yu, H.1
Zhu, S.2
Zhou, B.3
-
41
-
-
22744432660
-
Genome-scale identification of nucleosome positions in S. cerevisiae
-
Yuan GC, Liu YJ, Dion MF, et al. 2005. Genome-scale identification of nucleosome positions in S. cerevisiae. Science 309: 626-630.
-
(2005)
Science
, vol.309
, pp. 626-630
-
-
Yuan, G.C.1
Liu, Y.J.2
Dion, M.F.3
-
42
-
-
0035883954
-
Transcription regulation by histone methylation: interplay between different covalent modifications of the core histone tails
-
Zhang Y, Reinberg D. 2001. Transcription regulation by histone methylation: interplay between different covalent modifications of the core histone tails. Genes Dev 15: 2343-2360.
-
(2001)
Genes Dev
, vol.15
, pp. 2343-2360
-
-
Zhang, Y.1
Reinberg, D.2
|