-
1
-
-
84989412844
-
Conservation and distribution of genetic variation in a polytypic species, the cutthroat trout
-
doi:10.1111/j.1523-1739.1988.tb00168.x
-
Allendorf, F.W., and Leary, R.F. 1988. Conservation and distribution of genetic variation in a polytypic species, the cutthroat trout. Conserv. Biol. 2(2): 170-184. doi:10.1111/j.1523-1739.1988.tb00168.x.
-
(1988)
Conserv. Biol
, vol.2
, Issue.2
, pp. 170-184
-
-
Allendorf, F.W.1
Leary, R.F.2
-
2
-
-
0035501220
-
The problems with hybrids: Setting conservation guidelines
-
doi:10.1016/S0169-5347(01)02290-X
-
Allendorf, F.W., Leary, R.F., Spruell, P., and Wenburg, J.K. 2001. The problems with hybrids: setting conservation guidelines. Trends Ecol. Evol. 16(11): 613-622. doi:10.1016/S0169-5347(01)02290-X.
-
(2001)
Trends Ecol. Evol
, vol.16
, Issue.11
, pp. 613-622
-
-
Allendorf, F.W.1
Leary, R.F.2
Spruell, P.3
Wenburg, J.K.4
-
3
-
-
5344280520
-
Intercrosses and the U.S. endangered species act: Should hybridized populations be included as westslope cutthroat trout?
-
doi:10.1111/j.1523-1739.2004.00305.x
-
Allendorf, F.W., Leary, R.F., Hitt, N.P., Knudsen, K.L., Lundquist,L.L., and Spruell, P. 2004. Intercrosses and the U.S. endangered species act: Should hybridized populations be included as westslope cutthroat trout? Conserv. Biol. 18(5): 1203-1213. doi:10.1111/j.1523-1739.2004.00305.x.
-
(2004)
Conserv. Biol
, vol.18
, Issue.5
, pp. 1203-1213
-
-
Allendorf, F.W.1
Leary, R.F.2
Hitt, N.P.3
Knudsen, K.L.4
Lundquist, L.L.5
Spruell, P.6
-
4
-
-
22144499620
-
An efficient Monte Carlo method for estimating Ne from temporally spaced samples using a coalescent-based likelihood
-
doi:10.1534/genetics.104.038349. PMID:15834143
-
Anderson, E.C. 2005. An efficient Monte Carlo method for estimating Ne from temporally spaced samples using a coalescent-based likelihood. Genetics, 170(2): 955-967. doi:10.1534/genetics.104.038349. PMID:15834143.
-
(2005)
Genetics
, vol.170
, Issue.2
, pp. 955-967
-
-
Anderson, E.C.1
-
5
-
-
1642269679
-
Identifying Adaptive Genetic Divergence Among Populations From Genome Scans
-
doi:10.1111/j.1365-294X.2004
-
Beaumont, M.A., and Balding, D.J. 2004. Identifying adaptive genetic divergence among populations from genome scans. Mol. Ecol. 13(4): 969-980. doi:10.1111/j.1365-294X.2004.02125.x. PMID:15012769.
-
(2004)
Mol. Ecol
, vol.13
, Issue.4
, pp. 969-980
-
-
Beaumont, M.A.1
Balding, D.J.2
-
6
-
-
21744458986
-
Genetic analyses of juvenile steelhead, coastal cutthroat trout, and their hybrids differ substantially from field identification
-
doi:10.1577/T04-114.1
-
Baumsteiger, J. Hankin D. Loudenslager E.J. 2005. Genetic analyses of juvenile steelhead, coastal cutthroat trout, and their hybrids differ substantially from field identification. Trans. Am. Fish. Soc. 134(4): 829-840. doi:10.1577/T04-114.1.
-
(2005)
Trans. Am. Fish. Soc
, vol.134
, Issue.4
, pp. 829-840
-
-
Baumsteiger, J.1
Hankin, D.2
Loudenslager, E.J.3
-
7
-
-
0005726246
-
A systematic study of the family Salmonidae with special reference to the genus
-
Ph.D. thesis, University of California, Berkeley, Calif
-
Behnke, R.J. 1965. A systematic study of the family Salmonidae with special reference to the genus Salmo. Ph.D. thesis, University of California, Berkeley, Calif.
-
(1965)
Salmo
-
-
Behnke, R.J.1
-
9
-
-
0037630867
-
The use of nuclear and mitochondrial single nucleotide polymorphisms to identify cryptic species
-
doi:10.1046/j.1365-294X.2003.01874.x. PMID:12803650
-
Belfiore, N.M., Hoffman, F.G., Baker, R.G., and Dewoody, J.A. 2003. The use of nuclear and mitochondrial single nucleotide polymorphisms to identify cryptic species. Mol. Ecol. 12(7): 2011-2017. doi:10.1046/j.1365-294X.2003.01874.x. PMID:12803650.
-
(2003)
Mol. Ecol
, vol.12
, Issue.7
, pp. 2011-2017
-
-
Belfiore, N.M.1
Hoffman, F.G.2
Baker, R.G.3
Dewoody, J.A.4
-
10
-
-
33845941859
-
GENETIX 4.05, logiciel sous Windows pour la génétique des populations. Laboratoire Génome, Populations
-
Université de Montpellier II, Montpellier, France
-
Belkhir, K., Borsa, P., Chikhi, L., Raufaste, N., and Bonhomme, F. 1996-2004. GENETIX 4.05, logiciel sous Windows pour la génétique des populations. Laboratoire Génome, Populations, Interactions CNRS UMR 5000, Université de Montpellier II, Montpellier, France.
-
(1996)
Interactions CNRS UMR 5000
-
-
Belkhir, K.1
Borsa, P.2
Chikhi, L.3
Raufaste, N.4
Bonhomme, F.5
-
11
-
-
77649138589
-
Propagule pressure and stream characteristics influence introgression: Cutthroat and rainbow trout in British Columbia
-
doi:10.1890/08-0441.1. PMID:20349846
-
Bennett, S.N., Olson, J.R., Kershner, J.L., and Corbett, P. 2010. Propagule pressure and stream characteristics influence introgression: cutthroat and rainbow trout in British Columbia. Ecol. Appl. 20(1): 263-277. doi:10.1890/08-0441.1. PMID:20349846.
-
(2010)
Ecol. Appl
, vol.20
, Issue.1
, pp. 263-277
-
-
Bennett, S.N.1
Olson, J.R.2
Kershner, J.L.3
Corbett, P.4
-
12
-
-
0036846287
-
The use of AFLP to find an informative SNP: Genetic differences across a migratory divide in willow warblers
-
doi:10.1046/j.1365-294X.2002.01629.x. PMID:12406246
-
Bensch, S., Akesson, S., and Irwin, D. 2002. The use of AFLP to find an informative SNP: genetic differences across a migratory divide in willow warblers. Mol. Ecol. 11(11): 2359-2366. doi:10.1046/j.1365-294X.2002.01629.x. PMID:12406246.
-
(2002)
Mol. Ecol
, vol.11
, Issue.11
, pp. 2359-2366
-
-
Bensch, S.1
Akesson, S.2
Irwin, D.3
-
13
-
-
41549169648
-
Rainbow trout (Oncorhynchus mykiss) invasion and the spread of hybridization with native westslope cutthroat trout (Oncorhynchus clarkii lewisi)
-
doi:10.1139/f08-001
-
Boyer, M.C., Muhlfeld, C.C., and Allendorf, F.W. 2008. Rainbow trout (Oncorhynchus mykiss) invasion and the spread of hybridization with native westslope cutthroat trout (Oncorhynchus clarkii lewisi). Can. J. Fish. Aquat. Sci. 65(4): 658-669. doi:10.1139/f08-001.
-
(2008)
Can. J. Fish. Aquat. Sci
, vol.65
, Issue.4
, pp. 658-669
-
-
Boyer, M.C.1
Muhlfeld, C.C.2
Allendorf, F.W.3
-
14
-
-
0000416655
-
Introgressive hybridization in populations of Paiute cutthroat trout (Salmo clarki seleniris)
-
doi:10.1139/f81-127
-
Busack, C.A., and Gall, G.A.E. 1981. Introgressive hybridization in populations of Paiute cutthroat trout (Salmo clarki seleniris). Can. J. Fish. Aquat. Sci. 38(8): 939-951. doi:10.1139/f81-127.
-
(1981)
Can. J. Fish. Aquat. Sci
, vol.38
, Issue.8
, pp. 939-951
-
-
Busack, C.A.1
Gall, G.A.E.2
-
15
-
-
0034918729
-
Estimation of admixture proportions: A likelihood-based approach using Markov chain Monte Carlo
-
PMID:11454781
-
Chikhi, L., Bruford, M.W., and Beaumont, M.A. 2001. Estimation of admixture proportions: a likelihood-based approach using Markov chain Monte Carlo. Genetics, 158(3): 1347-1362. PMID:11454781.
-
(2001)
Genetics
, vol.158
, Issue.3
, pp. 1347-1362
-
-
Chikhi, L.1
Bruford, M.W.2
Beaumont, M.A.3
-
16
-
-
3242787094
-
Conservation of Paiute cutthroat: The genetic legacy of population transplants in an endemic California salmonid. Calif
-
Cordes, J.F., Israel, J.A., and May, B. 2004. Conservation of Paiute cutthroat: the genetic legacy of population transplants in an endemic California salmonid. Calif. Fish Game, 90(3): 101-118.
-
(2004)
Fish Game
, vol.90
, Issue.3
, pp. 101-118
-
-
Cordes, J.F.1
Israel, J.A.2
May, B.3
-
17
-
-
33749164912
-
Identifying introgressive hybridization in native populations of California golden trout based on molecular markers
-
doi:10.1577/T05-120.1
-
Cordes, J.F., Stephens, M.R., Blumberg, M.A., and May, B. 2006. Identifying introgressive hybridization in native populations of California golden trout based on molecular markers. Trans. Am. Fish. Soc. 135(1): 110-128. doi:10.1577/T05-120.1.
-
(2006)
Trans. Am. Fish. Soc
, vol.135
, Issue.1
, pp. 110-128
-
-
Cordes, J.F.1
Stephens, M.R.2
Blumberg, M.A.3
May, B.4
-
18
-
-
10644227383
-
The role of hybridization in the distribution, conservation and management of aquatic species
-
doi:10.1023/A:1016729132297
-
Epifanio, J., and Nielsen, J. 2000. The role of hybridization in the distribution, conservation and management of aquatic species. Rev. Fish Biol. Fish. 10(3): 245-251. doi:10.1023/A:1016729132297.
-
(2000)
Rev. Fish Biol. Fish
, vol.10
, Issue.3
, pp. 245-251
-
-
Epifanio, J.1
Nielsen, J.2
-
19
-
-
21244479740
-
Detecting the number of clusters of individuals using the software structure: A simulation study
-
doi:10.1111/j.1365-294X.2005.02553.x. PMID:15969739
-
Evanno, G., Regnaut, S., and Goudet, J. 2005. Detecting the number of clusters of individuals using the software structure: a simulation study. Mol. Ecol. 14(8): 2611-2620. doi:10.1111/j.1365-294X.2005.02553.x. PMID:15969739.
-
(2005)
Mol. Ecol
, vol.14
, Issue.8
, pp. 2611-2620
-
-
Evanno, G.1
Regnaut, S.2
Goudet, J.3
-
20
-
-
77953032930
-
Arlequin suite ver 3.5: A new series of programs to perform population genetic analyses under Linux and Windows
-
doi:10.1111/j.1755-0998.2010.02847.x. PMID:21565059
-
Excoffier, L., and Lischer, H.E.L. 2010. Arlequin suite ver 3.5: a new series of programs to perform population genetic analyses under Linux and Windows. Mol. Ecol. Resour. 10(3): 564-567. doi:10.1111/j.1755-0998.2010.02847.x. PMID:21565059.
-
(2010)
Mol. Ecol. Resour
, vol.10
, Issue.3
, pp. 564-567
-
-
Excoffier, L.1
Lischer, H.E.L.2
-
21
-
-
65249118273
-
Six diagnostic single nucleotide polymorphism markers for detecting introgression between cutthroat and rainbow trouts
-
doi:10.1111/j.1755-0998.2009. 02532.x. PMID:21564737
-
Finger, A.J., Stephens, M.R., Clipperton, N.W., and May, B. 2009. Six diagnostic single nucleotide polymorphism markers for detecting introgression between cutthroat and rainbow trouts. Mol. Ecol. Resour. 9(3): 759-763. doi:10.1111/j.1755-0998.2009. 02532.x. PMID:21564737.
-
(2009)
Mol. Ecol. Resour
, vol.9
, Issue.3
, pp. 759-763
-
-
Finger, A.J.1
Stephens, M.R.2
Clipperton, N.W.3
May, B.4
-
22
-
-
58149347836
-
A genome-scan method to identify selected loci appropriate for both dominant and codominant markers: A Bayesian perspective
-
doi:10.1534/genetics.108.092221. PMID:18780740
-
Foll, M., and Gaggiotti, O. 2008. A genome-scan method to identify selected loci appropriate for both dominant and codominant markers: a Bayesian perspective. Genetics, 180(2): 977-993. doi:10.1534/genetics.108.092221. PMID:18780740.
-
(2008)
Genetics
, vol.180
, Issue.2
, pp. 977-993
-
-
Foll, M.1
Gaggiotti, O.2
-
23
-
-
0028874989
-
Effective population size/adult population size ratios in wildlife: A review
-
doi:10.1017/S0016672300034455. PMID:18976539
-
Frankham, R. 1995. Effective population size/adult population size ratios in wildlife: a review. Genet. Res. 66(2): 95-107. doi:10.1017/S0016672300034455. PMID:18976539.
-
(1995)
Genet. Res
, vol.66
, Issue.2
, pp. 95-107
-
-
Frankham, R.1
-
24
-
-
38249030419
-
Heritability of age at spawning for rainbow trout
-
doi:10.1016/0044-8486(88)90233-5
-
Gall, G.A.E., Baltodano, J., and Huang, N. 1988. Heritability of age at spawning for rainbow trout. Aquaculture, 68(2): 93-102. doi:10.1016/0044-8486(88)90233-5.
-
(1988)
Aquaculture
, vol.68
, Issue.2
, pp. 93-102
-
-
Gall, G.A.E.1
Baltodano, J.2
Huang, N.3
-
25
-
-
2542425766
-
CONVERT: A user-friendly program to reformat diploid genotypic data for commonly used population genetic software packages
-
doi:10.1111/j.1471-8286.2004.00597.x
-
Glaubitz, J.C. 2004. CONVERT: A user-friendly program to reformat diploid genotypic data for commonly used population genetic software packages. Mol. Ecol. Notes, 4(2): 309-310. doi:10.1111/j.1471-8286.2004.00597.x.
-
(2004)
Mol. Ecol. Notes
, vol.4
, Issue.2
, pp. 309-310
-
-
Glaubitz, J.C.1
-
26
-
-
77954262370
-
Environmental factors associated with reproductive barrier breakdown in sympatric trout populations on Vancouver Island
-
doi:10.1111/j.1752-4571.2009.00100.x
-
Heath, D., Bettles, C.M., and Roff, D. 2010. Environmental factors associated with reproductive barrier breakdown in sympatric trout populations on Vancouver Island. Evol. Appl. 3(1): 77-90. doi:10.1111/j.1752-4571.2009.00100.x.
-
(2010)
Evol. Appl
, vol.3
, Issue.1
, pp. 77-90
-
-
Heath, D.1
Bettles, C.M.2
Roff, D.3
-
27
-
-
1442290963
-
Spread of hybridization between native westslope cutthroat trout, Oncorhynchus clarki lewisi, and nonnative rainbow trout, Oncorhynchus mykiss
-
doi:10.1139/f03-125
-
Hitt, N.P., Frissell, C.A., Muhlfeld, C.C., and Allendorf, F.W. 2003. Spread of hybridization between native westslope cutthroat trout, Oncorhynchus clarki lewisi, and nonnative rainbow trout, Oncorhynchus mykiss. Can. J. Fish. Aquat. Sci. 60(12): 1440-1451. doi:10.1139/f03-125.
-
(2003)
Can. J. Fish. Aquat. Sci
, vol.60
, Issue.12
, pp. 1440-1451
-
-
Hitt, N.P.1
Frissell, C.A.2
Muhlfeld, C.C.3
Allendorf, F.W.4
-
28
-
-
34547861256
-
CLUMPP: A cluster matching and permutation program for dealing with label switching and multimodality in analysis of population structure
-
doi:10.1093/bioinformatics/btm233. PMID:17485429
-
Jakobsson, M., and Rosenberg, N.A. 2007. CLUMPP: a cluster matching and permutation program for dealing with label switching and multimodality in analysis of population structure. Bioinformatics, 23(14): 1801-1806. doi:10.1093/bioinformatics/btm233. PMID:17485429.
-
(2007)
Bioinformatics
, vol.23
, Issue.14
, pp. 1801-1806
-
-
Jakobsson, M.1
Rosenberg, N.A.2
-
29
-
-
0036185341
-
Relationship of effective to census size in fluctuating populations
-
doi:10.1046/j.1523-1739.2002.00134.x
-
Kalinowski, S.T., and Waples, R.S. 2002. Relationship of effective to census size in fluctuating populations. Conserv. Biol. 16(1): 129-136. doi:10.1046/j.1523-1739.2002.00134.x.
-
(2002)
Conserv. Biol
, vol.16
, Issue.1
, pp. 129-136
-
-
Kalinowski, S.T.1
Waples, R.S.2
-
30
-
-
0002556819
-
On the genealogy of large populations
-
doi:10.2307/3213548
-
Kingman, J.F.C. 1982. On the genealogy of large populations. J. Appl. Prob. 19: 27-43. doi:10.2307/3213548.
-
(1982)
J. Appl. Prob
, vol.19
, pp. 27-43
-
-
Kingman, J.F.C.1
-
31
-
-
0003402303
-
GENETIC DATA ANALYSIS: A computer program for the analysis of allelic data
-
Free program distributed by the authors, available from
-
Lewis, P.O., and Zaykin, D. 2001. GENETIC DATA ANALYSIS: a computer program for the analysis of allelic data. Version 1.0 (d16c). Free program distributed by the authors, available from http://hydrodictyon.eeb.uconn.edu/people/plewis/software.php.
-
(2001)
Version 1.0 (d16c)
-
-
Lewis, P.O.1
Zaykin, D.2
-
32
-
-
0015879546
-
Distribution of gene frequency as a test of the theory of the selective neutrality of polymorphisms
-
PMID:4711903
-
Lewontin, R.C., and Krakauer, J. 1973. Distribution of gene frequency as a test of the theory of the selective neutrality of polymorphisms. Genetics, 74(1): 175-195. PMID:4711903.
-
(1973)
Genetics
, vol.74
, Issue.1
, pp. 175-195
-
-
Lewontin, R.C.1
Krakauer, J.2
-
33
-
-
0026030165
-
The genetic structure of admixed populations
-
PMID:2004712
-
Long, J.C. 1991. The genetic structure of admixed populations. Genetics, 127(2): 417-428. PMID:2004712.
-
(1991)
Genetics
, vol.127
, Issue.2
, pp. 417-428
-
-
Long, J.C.1
-
34
-
-
0030473605
-
Phylogeny of Pacific salmon and trout based on growth hormone type-2 and mitochondrial NADH dehydrogenase subunit 3 DNA sequences
-
doi:10.1139/f96-042
-
McKay, S.J., Devlin, R.H., and Smith, M.J. 1996. Phylogeny of Pacific salmon and trout based on growth hormone type-2 and mitochondrial NADH dehydrogenase subunit 3 DNA sequences. Can. J. Fish. Aquat. Sci. 53(5): 1165-1176. doi:10.1139/f96-042.
-
(1996)
Can. J. Fish. Aquat. Sci
, vol.53
, Issue.5
, pp. 1165
-
-
McKay, S.J.1
Devlin, R.H.2
Smith, M.J.3
-
35
-
-
44249116605
-
Hybridization between the escaped Rosa rugosa (Rosacea) and native R. blanda in eastern North America
-
doi:10.3732/ajb.2007385. PMID:21632386
-
Mercure, M., and Bruneau, A. 2008. Hybridization between the escaped Rosa rugosa (Rosacea) and native R. blanda in eastern North America. Am. J. Bot. 95(5): 597-607. doi:10.3732/ajb.2007385. PMID:21632386.
-
(2008)
Am. J. Bot
, vol.95
, Issue.5
, pp. 597-607
-
-
Mercure, M.1
Bruneau, A.2
-
36
-
-
35448953644
-
Across the great divide: Genetic forensics reveals misidentification of endangered cutthroat trout populations
-
doi:10.1111/j.1365-294X.2007.03472.x. PMID:17727621
-
Metcalf, J.L., Pritchard, V.L., Silvestri, S.M., Jenkins, J.B., Wood, J.S., Cowley, D.E., Evans, P.R., Shiozawa, D.K., and Martin, A.P. 2007. Across the great divide: genetic forensics reveals misidentification of endangered cutthroat trout populations. Mol. Ecol. 16(21): 4445-4454. doi:10.1111/j.1365-294X.2007.03472.x. PMID:17727621.
-
(2007)
Mol. Ecol
, vol.16
, Issue.21
, pp. 4445-4454
-
-
Metcalf, J.L.1
Pritchard, V.L.2
Silvestri, S.M.3
Jenkins, J.B.4
Wood, J.S.5
Cowley, D.E.6
Evans, P.R.7
Shiozawa, D.K.8
Martin, A.P.9
-
37
-
-
41149157935
-
Hybridization dynamics between Colorado's native cutthroat trout and introduced rainbow trout
-
doi:10.1093/jhered/esm118. PMID:18238784
-
Metcalf, J.L., Siegle, M.R., and Martin, A.P. 2008. Hybridization dynamics between Colorado's native cutthroat trout and introduced rainbow trout. J. Hered. 99(2): 149-156. doi:10.1093/jhered/esm118. PMID:18238784.
-
(2008)
J. Hered
, vol.99
, Issue.2
, pp. 149-156
-
-
Metcalf, J.L.1
Siegle, M.R.2
Martin, A.P.3
-
38
-
-
58949096374
-
Assessing statistical power of SNPs for population structure and conservation studies
-
doi:10.1111/j.1755-0998. 2008.02392.x. PMID:21564568
-
Morin, P.A., Martien, K.K., and Taylor, B.L. 2009. Assessing statistical power of SNPs for population structure and conservation studies. Mol. Ecol. Resour. 9(1): 66-73. doi:10.1111/j.1755-0998. 2008.02392.x. PMID:21564568.
-
(2009)
Mol. Ecol. Resour
, vol.9
, Issue.1
, pp. 66-73
-
-
Morin, P.A.1
Martien, K.K.2
Taylor, B.L.3
-
39
-
-
67649118289
-
Hybridization rapidly reduces fitness of a native trout in the wild
-
doi:10.1098/rsbl.2009.0033. PMID:19324629
-
Muhlfeld, C.C., Kalinowski, S.T., McMahon, T.E., Taper, M.L., Painter, S., Leary, R.F., and Allendorf, F.W. 2009a. Hybridization rapidly reduces fitness of a native trout in the wild. Biol. Lett. 5(3): 328-331. doi:10.1098/rsbl.2009.0033. PMID:19324629.
-
(2009)
Biol. Lett
, vol.5
, Issue.3
, pp. 328-331
-
-
Muhlfeld, C.C.1
Kalinowski, S.T.2
McMahon, T.E.3
Taper, M.L.4
Painter, S.5
Leary, R.F.6
Allendorf, F.W.7
-
40
-
-
70349487386
-
Spatial and temporal spawning dynamics of native westslope cutthroat trout (Oncorhynchus clarkii lewisi), introduced rainbow trout (Oncorhynchus mykiss), and their hybrids
-
doi:10.1139/F09-073
-
Muhlfeld, C.C., McMahon, T.E., and Belcer, D. 2009b. Spatial and temporal spawning dynamics of native westslope cutthroat trout (Oncorhynchus clarkii lewisi), introduced rainbow trout (Oncorhynchus mykiss), and their hybrids. Can. J. Fish. Aquat. Sci. 66: 1153-1168. doi:10.1139/F09-073.
-
(2009)
Can. J. Fish. Aquat. Sci
, vol.66
, pp. 1153-1168
-
-
Muhlfeld, C.C.1
McMahon, T.E.2
Belcer, D.3
-
41
-
-
70349488267
-
Local-habitat, watershed, and biotic factors in the spread of hybridization between native westslope cutthroat trout and introduced rainbow trout
-
doi:10.1577/T08-235.1
-
Muhlfeld, C.C., McMahon, T.E., Boyer, M.C., and Gresswell, R.E. 2009c. Local-habitat, watershed, and biotic factors in the spread of hybridization between native westslope cutthroat trout and introduced rainbow trout. Trans. Am. Fish. Soc. 138(5): 1036-1051. doi:10.1577/T08-235.1.
-
(2009)
Trans. Am. Fish. Soc
, vol.138
, Issue.5
, pp. 1036-1051
-
-
Muhlfeld, C.C.1
McMahon, T.E.2
Boyer, M.C.3
Gresswell, R.E.4
-
42
-
-
47649115949
-
Genetic estimates of contemporary effective population size: What can they tell us about the importance of genetic stochasticity for wild population persistence?
-
doi:10.1111/j.1365-294X.2008.03842.x. PMID:19160474
-
Palstra, F.P., and Ruzzante, D.E. 2008. Genetic estimates of contemporary effective population size: What can they tell us about the importance of genetic stochasticity for wild population persistence? Mol. Ecol. 17(15): 3428-3447. doi:10.1111/j.1365-294X.2008.03842.x. PMID:19160474.
-
(2008)
Mol. Ecol
, vol.17
, Issue.15
, pp. 3428-3447
-
-
Palstra, F.P.1
Ruzzante, D.E.2
-
43
-
-
0036897750
-
Characterization of 38 polymorphic microsatellite markers for rainbow trout (Oncorhynchus mykiss)
-
doi:10.1046/j.1471-8286.2002.00274.x
-
Palti, Y., Fincham, M.R., and Rexroad, C.E. 2002. Characterization of 38 polymorphic microsatellite markers for rainbow trout (Oncorhynchus mykiss). Mol. Ecol. Notes, 2(4): 449-452. doi:10.1046/j.1471-8286.2002.00274.x.
-
(2002)
Mol. Ecol. Notes
, vol.2
, Issue.4
, pp. 449-452
-
-
Palti, Y.1
Fincham, M.R.2
Rexroad, C.E.3
-
44
-
-
0034118493
-
Inference of population structure using multilocus genotype data
-
PMID:10835412
-
Pritchard, J.K., Stephens, M., and Donnelly, P. 2000. Inference of population structure using multilocus genotype data. Genetics, 155(2): 945-959. PMID:10835412.
-
(2000)
Genetics
, vol.155
, Issue.2
, pp. 945-959
-
-
Pritchard, J.K.1
Stephens, M.2
Donnelly, P.3
-
45
-
-
75449112066
-
Ecological consequences of hybridization between native westslope cutthroat (Oncorhynchus clarkii lewisi) and introduced rainbow (Oncorhynchus mykiss) trout: Effects on life history and habitat use
-
doi:10.1139/F09-191
-
Rasmussen, J.B., Robinson, M.D., and Heath, D.D. 2010. Ecological consequences of hybridization between native westslope cutthroat (Oncorhynchus clarkii lewisi) and introduced rainbow (Oncorhynchus mykiss) trout: effects on life history and habitat use. Can. J. Fish. Aquat. Sci. 67(2): 357-370. doi:10.1139/F09-191.
-
(2010)
Can. J. Fish. Aquat. Sci
, vol.67
, Issue.2
, pp. 357-370
-
-
Rasmussen, J.B.1
Robinson, M.D.2
Heath, D.D.3
-
46
-
-
0000262278
-
GENEPOP (version 1.2): Population genetics software for exact tests and ecumenicism
-
Raymond, M., and Rousset, F. 1995. GENEPOP (version 1.2): population genetics software for exact tests and ecumenicism. J. Hered. 86(3): 248-249.
-
(1995)
J. Hered
, vol.86
, Issue.3
, pp. 248-249
-
-
Raymond, M.1
Rousset, F.2
-
47
-
-
0036207888
-
Development of rainbow trout microsatellite markers from repeat enriched libraries
-
doi:10.1007/s10126-001-0058-6. PMID:14961284
-
Rexroad, C.E., III, Coleman, R.L., Gustafson, A.L., Hershberger, W. K., and Killefer, J. 2002a. Development of rainbow trout microsatellite markers from repeat enriched libraries. Mar. Biotechnol. 4(1): 12-16. doi:10.1007/s10126-001-0058-6. PMID:14961284.
-
(2002)
Mar. Biotechnol
, vol.4
, Issue.1
, pp. 12-16
-
-
Rexroad III., C.E.1
Coleman, R.L.2
Gustafson, A.L.3
Hershberger, W.K.4
Killefer, J.5
-
48
-
-
0036480289
-
Rapid communication: Thirty-eight polymorphic micro-satellite markers for mapping in rainbow trout
-
PMID:11881939
-
Rexroad, C.E., III, Coleman, R.L., Hershberger, W.K., and Killefer, J. 2002b. Rapid communication: thirty-eight polymorphic micro-satellite markers for mapping in rainbow trout. J. Anim. Sci. 80(2): 541-542. PMID:11881939.
-
(2002)
J. Anim. Sci
, vol.80
, Issue.2
, pp. 541-542
-
-
Rexroad III., C.E.1
Coleman, R.L.2
Hershberger, W.K.3
Killefer, J.4
-
49
-
-
0030304977
-
Extinction by hybridization and introgression
-
doi:10.1146/annurev.ecolsys.27.1.83
-
Rhymer, J.M., and Simberloff, D. 1996. Extinction by hybridization and introgression. Annu. Rev. Ecol. Syst. 27(1): 83-109. doi:10.1146/annurev.ecolsys.27.1.83.
-
(1996)
Annu. Rev. Ecol. Syst
, vol.27
, Issue.1
, pp. 83
-
-
Rhymer, J.M.1
Simberloff, D.2
-
50
-
-
0000625869
-
Analyzing tables of statistical tests
-
doi:10.2307/2409177
-
Rice, W.R. 1989. Analyzing tables of statistical tests. Evolution, 43(1): 223-225. doi:10.2307/2409177.
-
(1989)
Evolution
, vol.43
, Issue.1
, pp. 223-225
-
-
Rice, W.R.1
-
51
-
-
1342331102
-
Distruct: A program for the graphical display of population structure
-
(Also available from, [modified 19 September 2010].), doi:10.1046/j.1471-8286.2003.00566.x
-
Rosenberg, N.A. 2004. Distruct: a program for the graphical display of population structure. Mol. Ecol. Notes, 4(1): 137-138. (Also available from http://rosenberglab.bioinformatics.med.umich.edu/distruct.html [modified 19 September 2010].) doi:10.1046/j.1471-8286.2003.00566.x.
-
(2004)
Mol. Ecol. Notes
, vol.4
, Issue.1
, pp. 137
-
-
Rosenberg, N.A.1
-
52
-
-
23844495529
-
An analysis of spatial and environmental factors influencing hybridization between native westslope cutthroat trout (Oncorhynchus clarki lewisi) and introduced rainbow trout (O. mykiss) in the upper Kootenay River drainage, British Columbia
-
doi:10.1007/s10592-005-4972-4
-
Rubidge, E.M., and Taylor, E.B. 2005. An analysis of spatial and environmental factors influencing hybridization between native westslope cutthroat trout (Oncorhynchus clarki lewisi) and introduced rainbow trout (O. mykiss) in the upper Kootenay River drainage, British Columbia. Conserv. Genet. 6(3): 369-384. doi:10.1007/s10592-005-4972-4.
-
(2005)
Conserv. Genet
, vol.6
, Issue.3
, pp. 369-384
-
-
Rubidge, E.M.1
Taylor, E.B.2
-
53
-
-
20144383488
-
Development and characterization of novel tetra-, tri-, and dinucleotide microsatellite markers in rainbow trout (Oncorhynchus mykiss)
-
doi:10.1111/j.1471-8286.2005.00900.x
-
Spies, I.B., Brasier, D.J., O'Reilly, P.T.L., Seamons, T.R., and Bentzen, P. 2005. Development and characterization of novel tetra-, tri-, and dinucleotide microsatellite markers in rainbow trout (Oncorhynchus mykiss). Mol. Ecol. Notes, 5(2): 278-281. doi:10.1111/j.1471-8286.2005.00900.x.
-
(2005)
Mol. Ecol. Notes
, vol.5
, Issue.2
, pp. 278-281
-
-
Spies, I.B.1
Brasier, D.J.2
O'Reilly, P.T.L.3
Seamons, T.R.4
Bentzen, P.5
-
54
-
-
34247593983
-
Fishing for SNPs: A targeted locus approach for single nucleotide polymorphisms in rainbow trout
-
doi:10.1577/T05-291.1
-
Sprowles, A.E., Stephens, M.R., Clipperton, N.W., and May, B.P. 2006. Fishing for SNPs: a targeted locus approach for single nucleotide polymorphisms in rainbow trout. Trans. Am. Fish. Soc. 135(6): 1698-1721. doi:10.1577/T05-291.1.
-
(2006)
Trans. Am. Fish. Soc
, vol.135
, Issue.6
, pp. 1698-1721
-
-
Sprowles, A.E.1
Stephens, M.R.2
Clipperton, N.W.3
May, B.P.4
-
55
-
-
80052063675
-
Chapter 2: Comparative analysis of SNP and microsatellite estimates of rainbow trout introgression in native California golden trout
-
Ph.D. dissertation, Graduate Group in Ecology, University of California, Davis, Calif
-
Stephens, M.R. 2007. Chapter 2: Comparative analysis of SNP and microsatellite estimates of rainbow trout introgression in native California golden trout. In Systematics, genetics and conservation of golden trout. Ph.D. dissertation, Graduate Group in Ecology, University of California, Davis, Calif.
-
(2007)
Systematics, Genetics and Conservation of Golden Trout
-
-
Stephens, M.R.1
-
56
-
-
58949083361
-
Subspecies- informative SNP assays for evaluating introgression between native golden trout and introduced rainbow trout
-
doi:10.1111/j.1755-0998.2008.02407.x. PMID:21564644
-
Stephens, M.R., Clipperton, N.W., and May, B.P. 2009. Subspecies- informative SNP assays for evaluating introgression between native golden trout and introduced rainbow trout. Mol. Ecol. Resour. 9(1): 339-343. doi:10.1111/j.1755-0998.2008.02407.x. PMID:21564644.
-
(2009)
Mol. Ecol. Resour
, vol.9
, Issue.1
, pp. 339-343
-
-
Stephens, M.R.1
Clipperton, N.W.2
May, B.P.3
-
57
-
-
0001912387
-
Coadaptation and outbreeding depression
-
Edited by M.E. Soulé. Sinauer Associates, Sunderland, Mass
-
Templeton, A.R. 1986. Coadaptation and outbreeding depression. In Conservation biology: the science of scarcity and diversity. Edited by M.E. Soulé. Sinauer Associates, Sunderland, Mass. pp. 105-116.
-
(1986)
Conservation Biology: The Science of Scarcity and Diversity
, pp. 105-116
-
-
Templeton, A.R.1
-
59
-
-
79954601246
-
Threatened status for three species of trout
-
US Fish and Wildlife Service
-
US Fish and Wildlife Service. 1975. Threatened status for three species of trout. Fed. Regist. 40: 29863-29864.
-
(1975)
Fed. Regist
, vol.40
, pp. 29863
-
-
-
60
-
-
80052074558
-
Revised recovery plan for the Paiute cutthroat trout (Oncorhynchus clarki seleniris)
-
US Fish and Wildlife Service, Portland, Ore
-
US Fish and Wildlife Service. 2004. Revised recovery plan for the Paiute cutthroat trout (Oncorhynchus clarki seleniris). US Fish and Wildlife Service, Portland, Ore.
-
(2004)
US Fish and Wildlife Service
-
-
-
61
-
-
0035704882
-
A pseudo-likelihood method for estimating effective population size from temporally spaced samples
-
doi:10.1017/S0016672301005286. PMID:11865714
-
Wang, J. 2001. A pseudo-likelihood method for estimating effective population size from temporally spaced samples. Genet. Res. 78(3): 243-257. doi:10.1017/S0016672301005286. PMID:11865714.
-
(2001)
Genet. Res
, vol.78
, Issue.3
, pp. 243
-
-
Wang, J.1
-
62
-
-
0038124411
-
Maximum-likelihood estimation of admixture proportions from genetic data
-
PMID:12807794
-
Wang, J. 2003. Maximum-likelihood estimation of admixture proportions from genetic data. Genetics, 164(2): 747-765. PMID:12807794.
-
(2003)
Genetics
, vol.164
, Issue.2
, pp. 747
-
-
Wang, J.1
-
63
-
-
33746435844
-
A coalescent-based estimator of admixture from DNA sequences
-
doi:10.1534/genetics.105.054130. PMID:16624918
-
Wang, J. 2006. A coalescent-based estimator of admixture from DNA sequences. Genetics, 173(3): 1679-1692. doi:10.1534/genetics.105.054130. PMID:16624918.
-
(2006)
Genetics
, vol.173
, Issue.3
, pp. 1679-1692
-
-
Wang, J.1
-
64
-
-
0021566877
-
Estimating F-statistics for the analysis of population structure
-
doi:10.2307/2408641
-
Weir, B.S., and Cockerham, C.C. 1984. Estimating F-statistics for the analysis of population structure. Evolution, 38(6): 1358-1370. doi:10.2307/2408641.
-
(1984)
Evolution
, vol.38
, Issue.6
, pp. 1358-1370
-
-
Weir, B.S.1
Cockerham, C.C.2
-
65
-
-
0036216822
-
Characterization of microsatellite loci in Chinook salmon (Oncorhynchus tsha-wytscha) and cross-species amplification in other salmonids
-
doi:10.1046/j.1471-8286.2002.00129.x
-
Williamson, K.S., Cordes, J.F., and May, B. 2002. Characterization of microsatellite loci in Chinook salmon (Oncorhynchus tsha-wytscha) and cross-species amplification in other salmonids. Mol. Ecol. Notes, 2(1): 17-19. doi:10.1046/j.1471-8286.2002.00129.x.
-
(2002)
Mol. Ecol. Notes
, vol.2
, Issue.1
, pp. 17-19
-
-
Williamson, K.S.1
Cordes, J.F.2
May, B.3
-
66
-
-
80052039238
-
-
in North Fork Cottonwood, Creek, Mono County, California, with notes on behavior in a stream aquarium. M.S. thesis, California State University, Long Beach, Calif
-
Wong, D.M. 1975. Aspects of the life history of the Paiute cutthroat trout, Salmo clarki seleniris Snyder, in North Fork Cottonwood Creek, Mono County, California, with notes on behavior in a stream aquarium. M.S. thesis, California State University, Long Beach, Calif.
-
(1975)
Aspects of the Life History of the Paiute Cutthroat Trout, Salmo Clarki Seleniris Snyder
-
-
Wong, D.M.1
-
67
-
-
22144499620
-
An efficient Monte Carlo method for estimating Ne from temporally spaced samples using a coalescent-based likelihood
-
doi:10.1534/genetics.104.038349. PMID:15834143
-
Anderson, E.C. 2005. An efficient Monte Carlo method for estimating Ne from temporally spaced samples using a coalescent-based likelihood. Genetics, 170(2): 955-967. doi:10.1534/genetics.104.038349. PMID:15834143.
-
(2005)
Genetics
, vol.170
, Issue.2
, pp. 955-967
-
-
Anderson, E.C.1
-
68
-
-
0036191720
-
Likelihood-based estimation of the effective population size using temporal changes in allele frequencies: A genealogical approach
-
PMID:11861575
-
Berthier, P., Beaumont, M.A., Cornuet, J.M., and Luikart, G. 2002. Likelihood-based estimation of the effective population size using temporal changes in allele frequencies: a genealogical approach. Genetics, 160(2): 741-751. PMID:11861575.
-
(2002)
Genetics
, vol.160
, Issue.2
, pp. 741-751
-
-
Berthier, P.1
Beaumont, M.A.2
Cornuet, J.M.3
Luikart, G.4
-
69
-
-
0034918729
-
Estimation of admixture proportions: A likelihood-based approach using Markov chain Monte Carlo
-
PMID:11454781
-
Chikhi, L., Bruford, M.W., and Beaumont, M.A. 2001. Estimation of admixture proportions: a likelihood-based approach using Markov chain Monte Carlo. Genetics, 158(3): 1347-1362. PMID:11454781.
-
(2001)
Genetics
, vol.158
, Issue.3
, pp. 1347-1362
-
-
Chikhi, L.1
Bruford, M.W.2
Beaumont, M.A.3
-
70
-
-
4043129651
-
Graphical models
-
doi:10.1214/088342304000000026
-
Jordan, M.I. 2004. Graphical models. Stat. Sci. 19(1): 140-155. doi:10.1214/088342304000000026.
-
(2004)
Stat. Sci
, vol.19
, Issue.1
, pp. 140-155
-
-
Jordan, M.I.1
|