-
1
-
-
0035865397
-
Our genome unveiled
-
Baltimore, D. 2001. Our genome unveiled. Nature 409:814-816.
-
(2001)
Nature
, vol.409
, pp. 814-816
-
-
Baltimore, D.1
-
3
-
-
34547931715
-
Cell- and gene-specific regulation of primary target genes by the androgen receptor
-
Bolton, E. C., et al. 2007. Cell- and gene-specific regulation of primary target genes by the androgen receptor. Genes Dev. 21:2005-2017.
-
(2007)
Genes Dev
, vol.21
, pp. 2005-2017
-
-
Bolton, E.C.1
-
4
-
-
0037178788
-
Evidence for a mediator of RNA polymerase II transcriptional regulation conserved from yeast to man
-
Boube, M., L. Joulian, D. L. Cribbs, and H. M. Bourbon. 2002. Evidence for a mediator of RNA polymerase II transcriptional regulation conserved from yeast to man. Cell 110:143-151.
-
(2002)
Cell
, vol.110
, pp. 143-151
-
-
Boube, M.1
Joulian, L.2
Cribbs, D.L.3
Bourbon, H.M.4
-
5
-
-
0347624645
-
Growth inhibition by the mammalian SWI-SNF subunit Brm is regulated by acetylation
-
Bourachot, B., M. Yaniv, and C. Muchardt. 2003. Growth inhibition by the mammalian SWI-SNF subunit Brm is regulated by acetylation. EMBO J. 22:6505-6515.
-
(2003)
EMBO J
, vol.22
, pp. 6505-6515
-
-
Bourachot, B.1
Yaniv, M.2
Muchardt, C.3
-
6
-
-
0014690698
-
Gene regulation for higher cells: a theory
-
Britten, R. J., and E. H. Davidson. 1969. Gene regulation for higher cells: a theory. Science 165:349-357.
-
(1969)
Science
, vol.165
, pp. 349-357
-
-
Britten, R.J.1
Davidson, E.H.2
-
7
-
-
70249121045
-
The logic of chromatin architecture and remodeling at promoters
-
Cairns, B. R. 2009. The logic of chromatin architecture and remodeling at promoters. Nature 461:193-198.
-
(2009)
Nature
, vol.461
, pp. 193-198
-
-
Cairns, B.R.1
-
8
-
-
67650725820
-
The biology of chromatin remodeling complexes
-
Clapier, C. R., and B. R. Cairns. 2009. The biology of chromatin remodeling complexes. Annu. Rev. Biochem. 78:273-304.
-
(2009)
Annu. Rev. Biochem.
, vol.78
, pp. 273-304
-
-
Clapier, C.R.1
Cairns, B.R.2
-
9
-
-
77951226495
-
SWI/SNF chromatin remodeling enzyme ATPases promote cell proliferation in normal mammary epithelial cells
-
Cohet, N., et al. 2010. SWI/SNF chromatin remodeling enzyme ATPases promote cell proliferation in normal mammary epithelial cells. J. Cell. Physiol. 223:667-678.
-
(2010)
J. Cell. Physiol.
, vol.223
, pp. 667-678
-
-
Cohet, N.1
-
10
-
-
0035134330
-
Mammalian SWI/SNF complexes promote MyoD-mediated muscle differentiation
-
de la Serna, I. L., K. A. Carlson, and A. N. Imbalzano. 2001. Mammalian SWI/SNF complexes promote MyoD-mediated muscle differentiation. Nat. Genet. 27:187-190.
-
(2001)
Nat. Genet.
, vol.27
, pp. 187-190
-
-
de la Serna, I.L.1
Carlson, K.A.2
Imbalzano, A.N.3
-
11
-
-
74049085411
-
Hypoxic repression of endothelial nitric-oxide synthase transcription is coupled with eviction of promoter histones
-
Fish, J. E., et al. 2010. Hypoxic repression of endothelial nitric-oxide synthase transcription is coupled with eviction of promoter histones. J. Biol. Chem. 285:81-826.
-
(2010)
J. Biol. Chem.
, vol.285
, pp. 81-826
-
-
Fish, J.E.1
-
12
-
-
65649085971
-
Antagonistic roles for BRM and BRG1 SWI/SNF complexes in differentiation
-
Flowers, S., N. G. Nagl, Jr., G. R. Beck, Jr., and E. Moran. 2009. Antagonistic roles for BRM and BRG1 SWI/SNF complexes in differentiation. J. Biol. Chem. 284:10067-10075.
-
(2009)
J. Biol. Chem.
, vol.284
, pp. 10067-10075
-
-
Flowers, S.1
Nagl Jr., N.G.2
Beck Jr., G.R.3
Moran, E.4
-
13
-
-
0032492846
-
Chromatin remodeling by the glucocorticoid receptor requires the BRG1 complex
-
Fryer, C. J., and T. K. Archer. 1998. Chromatin remodeling by the glucocorticoid receptor requires the BRG1 complex. Nature 393:88-91.
-
(1998)
Nature
, vol.393
, pp. 88-91
-
-
Fryer, C.J.1
Archer, T.K.2
-
14
-
-
65249150266
-
Glucocortoid receptor activation of the Ciz1-Lcn2 locus by long range interactions
-
Hakim, O., et al. 2009. Glucocortoid receptor activation of the Ciz1-Lcn2 locus by long range interactions. J. Biol. Chem. 284:6048-6052.
-
(2009)
J. Biol. Chem.
, vol.284
, pp. 6048-6052
-
-
Hakim, O.1
-
15
-
-
0032567081
-
Dissecting the regulatory circuitry of a eukaryotic genome
-
Holstege, F. C., et al. 1998. Dissecting the regulatory circuitry of a eukaryotic genome. Cell 95:717-728.
-
(1998)
Cell
, vol.95
, pp. 717-728
-
-
Holstege, F.C.1
-
16
-
-
0038558164
-
A role for cofactor-cofactor and cofactor-histone interactions in targeting p300
-
Huang, Z. Q., J. Li, L. M. Sachs, P. A. Cole, and J. Wong. 2003. A role for cofactor-cofactor and cofactor-histone interactions in targeting p300, SWI/SNF and Mediator for transcription. EMBO J. 22:2146-2155.
-
(2003)
SWI/SNF and Mediator for transcription. EMBO J.
, vol.22
, pp. 2146-2155
-
-
Huang, Z.Q.1
Li, J.2
Sachs, L.M.3
Cole, P.A.4
Wong, J.5
-
17
-
-
0033998733
-
SWI-SNFmediated nucleosome remodeling: role of histone octamer mobility in the persistence of the remodeled state
-
Jaskelioff, M., I. M. Gavin, C. L. Peterson, and C. Logie. 2000. SWI-SNFmediated nucleosome remodeling: role of histone octamer mobility in the persistence of the remodeled state. Mol. Cell. Biol. 20:3058-3068.
-
(2000)
Mol. Cell. Biol.
, vol.20
, pp. 3058-3068
-
-
Jaskelioff, M.1
Gavin, I.M.2
Peterson, C.L.3
Logie, C.4
-
18
-
-
40649106738
-
Interaction of the glucocorticoid receptor with the chromatin landscape
-
John, S., et al. 2008. Interaction of the glucocorticoid receptor with the chromatin landscape. Mol. Cell 29:611-624.
-
(2008)
Mol. Cell.
, vol.29
, pp. 611-624
-
-
John, S.1
-
19
-
-
79952184341
-
Chromatin accessibility pre-determines glucocorticoid receptor binding patterns
-
John, S., et al. 2011. Chromatin accessibility pre-determines glucocorticoid receptor binding patterns. Nat. Genet. 43:264-268.
-
(2011)
Nat. Genet.
, vol.43
, pp. 264-268
-
-
John, S.1
-
20
-
-
54249089082
-
Chromatin remodeling complexes interact dynamically with a glucocorticoid receptor-regulated promoter
-
Johnson, T. A., C. Elbi, B. S. Parekh, G. L. Hager, and S. John. 2008. Chromatin remodeling complexes interact dynamically with a glucocorticoid receptor-regulated promoter. Mol. Biol. Cell 19:3308-3322.
-
(2008)
Mol. Biol. Cell.
, vol.19
, pp. 3308-3322
-
-
Johnson, T.A.1
Elbi, C.2
Parekh, B.S.3
Hager G.L. S., John.4
-
21
-
-
0037291915
-
Transcriptional specificity of human SWI/SNF BRG1 and BRM chromatin remodeling complexes
-
Kadam, S., and B. M. Emerson. 2003. Transcriptional specificity of human SWI/SNF BRG1 and BRM chromatin remodeling complexes. Mol. Cell 11:377-389.
-
(2003)
Mol. Cell.
, vol.11
, pp. 377-389
-
-
Kadam, S.1
Emerson, B.M.2
-
22
-
-
0033568312
-
ATP-dependent remodeling and acetylation as regulators of chromatin fluidity
-
Kingston, R. E., and G. J. Narlikar. 1999. ATP-dependent remodeling and acetylation as regulators of chromatin fluidity. Genes Dev. 13:2339-2352.
-
(1999)
Genes Dev
, vol.13
, pp. 2339-2352
-
-
Kingston, R.E.1
Narlikar, G.J.2
-
23
-
-
0037819447
-
Transcription regulation and animal diversity
-
Levine, M., and R. Tjian. 2003. Transcription regulation and animal diversity. Nature 424:147-151.
-
(2003)
Nature
, vol.424
, pp. 147-151
-
-
Levine, M.1
Tjian, R.2
-
24
-
-
18244381020
-
The glucocorticoid receptor blocks P-TEFb recruitment by NFkB to effect promoter-specific transcriptional repression
-
Luecke, H. F., and K. R. Yamamoto. 2005. The glucocorticoid receptor blocks P-TEFb recruitment by NFkB to effect promoter-specific transcriptional repression. Genes Dev. 19:1116-1127.
-
(2005)
Genes Dev
, vol.19
, pp. 1116-1127
-
-
Luecke, H.F.1
Yamamoto, K.R.2
-
25
-
-
26944477381
-
Molecular basis for the recognition of phosphorylated and phosphoacetylated histone h3 by 14-3-3
-
MacDonald, N., et al. 2005. Molecular basis for the recognition of phosphorylated and phosphoacetylated histone h3 by 14-3-3. Mol. Cell 20:199-211.
-
(2005)
Mol. Cell 20
, pp. 199-211
-
-
MacDonald, N.1
-
26
-
-
0037154974
-
Combinatorial control of gene expression by nuclear receptors and coregulators
-
McKenna, N. J., and B. W. O'Malley. 2002. Combinatorial control of gene expression by nuclear receptors and coregulators. Cell 108:465-474.
-
(2002)
Cell
, vol.108
, pp. 465-474
-
-
McKenna, N.J.1
O'Malley, B.W.2
-
27
-
-
65249167505
-
DNA binding site sequence directs glucocorticoid receptor structure and activity
-
Meijsing, S. H., et al. 2009. DNA binding site sequence directs glucocorticoid receptor structure and activity. Science 324:407-410.
-
(2009)
Science
, vol.324
, pp. 407-410
-
-
Meijsing, S.H.1
-
28
-
-
71949083075
-
Functional specificities of Brm and Brg-1 Swi/Snf ATPases in the feedback regulation of hepatic bile acid biosynthesis
-
Miao, J., et al. 2009. Functional specificities of Brm and Brg-1 Swi/Snf ATPases in the feedback regulation of hepatic bile acid biosynthesis. Mol. Cell. Biol. 29:6170-6181.
-
(2009)
Mol. Cell. Biol.
, vol.29
, pp. 6170-6181
-
-
Miao, J.1
-
29
-
-
0029996147
-
In vivo gene delivery and stable transduction of nondividing cells by a lentiviral vector
-
Naldini, L., et al. 1996. In vivo gene delivery and stable transduction of nondividing cells by a lentiviral vector. Science 272:263-267.
-
(1996)
Science
, vol.272
, pp. 263-267
-
-
Naldini, L.1
-
30
-
-
0037154963
-
Cooperation between complexes that regulate chromatin structure and transcription
-
Narlikar, G. J., H. Y. Fan, and R. E. Kingston. 2002. Cooperation between complexes that regulate chromatin structure and transcription. Cell 108:475-487.
-
(2002)
Cell
, vol.108
, pp. 475-487
-
-
Narlikar, G.J.1
Fan, H.Y.2
Kingston, R.E.3
-
31
-
-
77249119220
-
Glucocorticoid receptor activates poised FKBP51 locus through long-distance interactions
-
Paakinaho, V., H. Makkonen, T. Jaaskelainen, and J. J. Palvimo. 2010. Glucocorticoid receptor activates poised FKBP51 locus through long-distance interactions. Mol. Endocrinol. 24:511-525.
-
(2010)
Mol. Endocrinol.
, vol.24
, pp. 511-525
-
-
Paakinaho, V.1
Makkonen, H.2
Jaaskelainen, T.3
Palvimo, J.J.4
-
32
-
-
57349194332
-
Glucocorticoid signaling defines a novel commitment state during adipogenesis in vitro
-
Pantoja, C., J. T. Huff, and K. R. Yamamoto. 2008. Glucocorticoid signaling defines a novel commitment state during adipogenesis in vitro. Mol. Biol. Cell 19:4032-4041.
-
(2008)
Mol. Biol. Cell.
, vol.19
, pp. 4032-4041
-
-
Pantoja, C.1
Huff, J.T.2
Yamamoto, K.R.3
-
33
-
-
46149108345
-
Rapid, transcription-independent loss of nucleosomes over a large chromatin domain at Hsp70 loci
-
Petesch, S. J., and J. T. Lis. 2008. Rapid, transcription-independent loss of nucleosomes over a large chromatin domain at Hsp70 loci. Cell 134:74-84.
-
(2008)
Cell
, vol.134
, pp. 74-84
-
-
Petesch, S.J.1
Lis, J.T.2
-
34
-
-
0033082238
-
Reconstitution of a core chromatin remodeling complex from SWI/SNF subunits
-
Phelan, M. L., S. Sif, G. J. Narlikar, and R. E. Kingston. 1999. Reconstitution of a core chromatin remodeling complex from SWI/SNF subunits. Mol. Cell 3:247-253.
-
(1999)
Mol. Cell.
, vol.3
, pp. 247-253
-
-
Phelan, M.L.1
Sif, S.2
Narlikar, G.J.3
Kingston, R.E.4
-
35
-
-
0032403109
-
Altered control of cellular proliferation in the absence of mammalian brahma (SNF2α)
-
Reyes, J. C., et al. 1998. Altered control of cellular proliferation in the absence of mammalian brahma (SNF2α). EMBO J. 17:6878-6991.
-
(1998)
EMBO J
, vol.17
, pp. 6878-6991
-
-
Reyes, J.C.1
-
36
-
-
0345564849
-
Target-specific utilization of transcriptional regulatory surfaces by the glucocorticoid receptor
-
Rogatsky, I., et al. 2003. Target-specific utilization of transcriptional regulatory surfaces by the glucocorticoid receptor. Proc. Natl. Acad. Sci. U. S. A. 100:13845-13850.
-
(2003)
Proc. Natl. Acad. Sci. U. S. A.
, vol.100
, pp. 13845-13850
-
-
Rogatsky, I.1
-
37
-
-
70350153633
-
Variations in the composition of mammalian SWI/SNF chromatin remodeling complexes
-
Ryme, J., P. Asp, S. Bohm, E. Cavellan, and A. K. Farrants. 2009. Variations in the composition of mammalian SWI/SNF chromatin remodeling complexes. J. Cell. Biochem. 108:565-576.
-
(2009)
J. Cell. Biochem.
, vol.108
, pp. 565-576
-
-
Ryme, J.1
Asp, P.2
Bohm, S.3
Cavellan, E.4
Farrants, A.K.5
-
38
-
-
35148882905
-
The Swi/Snf complex is important for histone eviction during transcriptional activation and RNA polymerase II elongation in vivo
-
Schwabish, M. A., and K. Struhl. 2007. The Swi/Snf complex is important for histone eviction during transcriptional activation and RNA polymerase II elongation in vivo. Mol. Cell. Biol. 27:6987-6995.
-
(2007)
Mol. Cell. Biol.
, vol.27
, pp. 6987-6995
-
-
Schwabish, M.A.1
Struhl, K.2
-
39
-
-
20444403749
-
Intrinsic histone-DNA interactions and low nucleosome density are important for preferential accessibility of promoter regions in yeast
-
Sekinger, E. A., Z. Moqtader, and K. Struhl. 2005. Intrinsic histone-DNA interactions and low nucleosome density are important for preferential accessibility of promoter regions in yeast. Mol. Cell 18:735-748.
-
(2005)
Mol. Cell
, vol.18
, pp. 735-748
-
-
Sekinger, E.A.1
Moqtader, Z.2
Struhl, K.3
-
40
-
-
0032530154
-
Mitotic inactivation of a human SWI/SNF chromatin remodeling complex
-
Sif, S. P. T. Stukenberg, M. W. Kirschner, and R. E. Kingston. 1998. Mitotic inactivation of a human SWI/SNF chromatin remodeling complex. Genes Dev. 12:2842-2851.
-
(1998)
Genes Dev
, vol.12
, pp. 2842-2851
-
-
Sif, X.1
Stukenberg, S.P.T.2
Kirschner, M.W.3
Kingston, R.E.4
-
41
-
-
34347324118
-
Determinants of cell- and gene-specific transcriptional regulation by the glucocorticoid receptor
-
So, A. Y., C. Chaivorapol, E. C. Bolton, H. Li, and K. R. Yamamoto. 2007. Determinants of cell- and gene-specific transcriptional regulation by the glucocorticoid receptor. PLoS Genet. 3:e94.
-
(2007)
PLoS Genet
, vol.3
, pp. 94
-
-
So, A.Y.1
Chaivorapol, C.2
Bolton, E.C.3
Li, H.4
Yamamoto, K.R.5
-
42
-
-
70350447953
-
Glucocorticoid regulation of the circadian clock modulates glucose homeostasis
-
So, A. Y., T. U. Bernal, M. L. Pillsbury, K. R. Yamamoto, and B. J. Feldman. 2009. Glucocorticoid regulation of the circadian clock modulates glucose homeostasis. Proc. Natl. Acad. Sci. U. S. A. 106:17582-17587.
-
(2009)
Proc. Natl. Acad. Sci. U. S. A.
, vol.106
, pp. 17582-17587
-
-
So, A.Y.1
Bernal, T.U.2
Pillsbury, M.L.3
Yamamoto, K.R.4
Feldman, B.J.5
-
43
-
-
0037085292
-
Compensation of BRG-1 function by Brm: insight into the role of the core SWI-SNF subunits in retinoblastoma tumor suppressor signaling
-
Strobeck, M. W., et al. 2002. Compensation of BRG-1 function by Brm: insight into the role of the core SWI-SNF subunits in retinoblastoma tumor suppressor signaling. J. Biol. Chem. 277:4782-4789.
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 4782-4789
-
-
Strobeck, M.W.1
-
44
-
-
1842609849
-
Reconstitution of glucocorticoid receptor-dependent transcription in vivo
-
Trotter, K. W., and T. K. Archer. 2004. Reconstitution of glucocorticoid receptor-dependent transcription in vivo. Mol. Cell. Biol. 24:3347-3358.
-
(2004)
Mol. Cell. Biol.
, vol.24
, pp. 3347-3358
-
-
Trotter, K.W.1
Archer, T.K.2
-
45
-
-
40149098862
-
The evolution of combinatorial gene regulation in fungi
-
Tuch, B. B., D. J. Galgoczy, A. D. Hernday, H. Li, and A. D. Johnson. 2008. The evolution of combinatorial gene regulation in fungi. PLoS Biol. 6:e38.
-
(2008)
PLoS Biol
, vol.6
, pp. 38
-
-
Tuch, B.B.1
Galgoczy, D.J.2
Hernday, A.D.3
Li, H.4
Johnson, A.D.5
-
46
-
-
0034704078
-
A novel nuclear receptor corepressor complex, N-CoR, contains components of the mammalian SWI/SNF complex and the corepressor KAP-1
-
Underhill, C., M. S. Qutob, S. P. Yee, and J. Torchia. 2000. A novel nuclear receptor corepressor complex, N-CoR, contains components of the mammalian SWI/SNF complex and the corepressor KAP-1. J. Biol. Chem. 275: 40463-40470.
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 40463-40470
-
-
Underhill, C.1
Qutob, M.S.2
Yee, S.P.3
Torchia, J.4
-
47
-
-
8144228848
-
Chromatin immunoprecipitation (ChIP) scanning identifies primary glucocorticoid receptor target genes
-
Wang, J. C., et al. 2004. Chromatin immunoprecipitation (ChIP) scanning identifies primary glucocorticoid receptor target genes. Proc. Natl. Acad. Sci. U. S. A. 101:15603-15608.
-
(2004)
Proc. Natl. Acad. Sci. U. S. A.
, vol.101
, pp. 15603-15608
-
-
Wang, J.C.1
-
48
-
-
33644996796
-
Novel arylpyrazole compounds selectively modulate glucocorticoid receptor regulatory activity
-
Wang, J. C., et al. 2006. Novel arylpyrazole compounds selectively modulate glucocorticoid receptor regulatory activity. Genes Dev. 20:689-699.
-
(2006)
Genes Dev
, vol.20
, pp. 689-699
-
-
Wang, J.C.1
-
49
-
-
0029787059
-
Diversity and specialization of mammalian SWI/SNF complexes
-
Wang, W., et al. 1996. Diversity and specialization of mammalian SWI/SNF complexes. Genes Dev. 10:2117-2130.
-
(1996)
Genes Dev
, vol.10
, pp. 2117-2130
-
-
Wang, W.1
-
50
-
-
0032190610
-
Combinatorial transcription factors
-
Wolberger, C. 1998. Combinatorial transcription factors. Curr. Opin. Genet. Dev. 8:552-559.
-
(1998)
Curr. Opin. Genet. Dev.
, vol.8
, pp. 552-559
-
-
Wolberger, C.1
-
51
-
-
10144221321
-
A conceptual view of transcriptional regulation
-
Yamamoto, K. R. 1989. A conceptual view of transcriptional regulation. Amer. Zool. 29:537-547.
-
(1989)
Amer. Zool.
, vol.29
, pp. 537-547
-
-
Yamamoto, K.R.1
-
52
-
-
0000017176
-
Combinatorial regulation at a mammalian composite response element
-
S. L. McKnight and K. R. Yamamoto (ed.) Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
-
Yamamoto, K. R., D. Pearce, J. Thomas, and J. N. Miner. 1992. Combinatorial regulation at a mammalian composite response element, p. 1169-1192. In S. L. McKnight and K. R. Yamamoto (ed.), Transcriptional regulation. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
-
(1992)
Transcriptional regulation
, pp. 1169-1192
-
-
Yamamoto, K.R.1
Pearce, D.2
Thomas, J.3
Miner, J.N.4
-
53
-
-
0027048595
-
Roles of SWI1, SWI2, and SWI3 proteins for transcriptional enhancement by steroid receptors
-
Yoshinaga, S. K., C. L. Peterson, I. Herskowitz, and K. R. Yamamoto. 1992. Roles of SWI1, SWI2, and SWI3 proteins for transcriptional enhancement by steroid receptors. Science 258:1598-1604.
-
(1992)
Science
, vol.258
, pp. 1598-1604
-
-
Yoshinaga, S.K.1
Peterson, C.L.2
Herskowitz, I.3
Yamamoto, K.R.4
|