Proteomic analysis of seed germination under salt stress in soybeans

Journal of Zhejiang University: Science B

Volumn 12, Issue 7, 2011, Pages 507-517

  Xu, Xiao Yan ^a,b   Fan, Rui ^a   Zheng, Rui ^a,c   Li, Chun Mei ^a   Yu, De Yue ^a  

^a NANJING AGRICULTURAL UNIVERSITY   (China)

^b Jiangsu Polytechnic College of Agriculture and Forestry   (China)

^c NINGXIA UNIVERSITY   (China)

Author keywords

Proteomics; Salt stress; Seed germination; Soybean

Indexed keywords

6 N (3,3 DIMETHYLALLYL)ADENOSINE; ABSCISIC ACID; FERRITIN; GIBBERELLIC ACID; GLUTATHIONE TRANSFERASE; GLUTATHIONE TRANSFERASE 10; GLUTATHIONE TRANSFERASE 9; GLYCERALDEHYDE 3 PHOSPHATE DEHYDROGENASE; INDOLEACETIC ACID; PROTEOME; SODIUM CHLORIDE; UNCLASSIFIED DRUG;

ARTICLE; CULTIVAR; GENETIC DATABASE; GERMINATION; MATRIX ASSISTED LASER DESORPTION IONIZATION TIME OF FLIGHT MASS SPECTROMETRY; NONHUMAN; PH MEASUREMENT; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN EXPRESSION; SALT STRESS; SOYBEAN; TWO DIMENSIONAL GEL ELECTROPHORESIS; UPREGULATION;

GLYCINE MAX;

EID: 79960471828     PISSN: 16731581     EISSN: 18621783     Source Type: Journal    
DOI: 10.1631/jzus.B1100061     Document Type: Article

References (54)

1. K. Aghaei A.A. Ehsanpour A.H. Shah S. Komatsu 2008 Proteome analysis of soybean hypocotyl and root under salt stress Amino Acids 36 1 91 98 18264660 10.1007/s00726-008-0036-7
2. G.K. Agrawal M. Hajduch K. Graham J.J. Thelen 2008 In-depth investigation of soybean seed-filling proteome and comparison with a parallel study of rapeseed Plant Physiol. 148 1 504 518 18599654 10.1104/pp.108.119222 1:CAS:528:DC%2BD1cXhtFKnu7%2FL (Pubitemid 352847583)
3. I. Alam S.A. Sharmin K.H. Kim J.K. Yang M.S. Choi B.H. Lee 2010 Proteome analysis of soybean roots subjected to short-term drought stress Plant Soil 333 1-2 491 505 10.1007/s11104-010-0365-7 1:CAS:528:DC%2BC3cXovFCjt78%3D
4. M. Almansouri J.M. Kinet S. Lutts 2001 Effect of salt and osmotic stresses on germination in durum wheat (Triticum durum Desf Plant Soil 231 2 243 254 10.1023/A:1010378409663 1:CAS:528:DC%2BD3MXltVelsrw%3D (Pubitemid 32595964)
5. C. Bianco R. Defez 2009 Medicago truncatula improves salt tolerance when nodulated by an indole-3-acetic acid-overproducing Sinorhizobium meliloti strain J. Exp. Bot. 60 11 3097 3107 19436044 10.1093/jxb/erp140 1:CAS:528: DC%2BD1MXpsValsbw%3D
6. S.A. Blackman S.H. Wettlaufer R.L. Obendorf A.C. Leopold 1991 Maturation proteins associated with desiccation tolerance in soybean Plant Physiol. 96 3 868 874 16668267 10.1104/pp.96.3.868 1:CAS:528:DyaK3MXltlaitrs%3D (Pubitemid 21914096)
7. J.S. Boyer 1982 Plant productivity and environment Science 218 4571 443 448 17808529 10.1126/science.218.4571.443 1:STN:280:DC%2BC3cvjvVahuw%3D%3D
8. M.M. Bradford 1976 A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein dye binding Anal. Biochem. 72 1-2 248 254 942051 10.1016/0003-2697(76)90527-3 1:CAS:528:DyaE28XksVehtrY%3D
9. J.F. Briat S. Lobréaux N. Grignon 1999 Regulation of plant ferritin synthesis: how and why Cell. Mol. Life Sci. 56 1-2 155 166 11213255 10.1007/s000180050014 1:CAS:528:DyaK1MXmslCmsbo%3D (Pubitemid 29471933)
10. J.G. Chen X.M. Du X. Zhou H.Y. Zhao 1997 Levels of cytokinins in the ovules of cotton mutants with altered fiber development J. Plant Growth Regul. 16 3 181 185 10.1007/PL00006994 1:CAS:528:DyaK2sXlvFKrsbo%3D (Pubitemid 27490920)
11. J.G. Chen X. Zhou Y.Z. Zhang 1998 Gibberellin-responding and non-responding dwarf mutants in foxtail millet Plant Growth Regul. 26 1 19 24 10.1023/A:1006091601256 1:CAS:528:DyaK1cXntlemtrk%3D (Pubitemid 28490300)
12. J.G. Chen S.H. Cheng W.X. Cao X. Zhou 1998 Involvement of endogenous plant hormones in the effect of mixed nitrogen source on growth and tillering of wheat J. Plant Nutr. 21 1 87 97 10.1080/01904169809365385 1:CAS:528: DyaK1cXhsVCiu7c%3D (Pubitemid 28158976)
13. L. Cheng X. Gao S. Li M. Shi H. Javeed X. Jing G. Yang G. He 2010 Proteomic analysis of soybean [Glycine max (L.) Meer.] seeds during imbibition at chilling temperature Mol. Breeding 26 1 1 17 10.1007/s11032-009-9371-y 1:CAS:528:DC%2BC3cXmtFWisLY%3D
14. E. Duée L. Olivier-Deyris E. Fanchon C. Corbier G. Branlant O. Dideberg 1996 Comparison of the structures of wild-type and a N313T mutant of Escherichia coli glyceraldehyde 3-phosphate dehydrogenases: implication for NAD binding and cooperativity J. Mol. Biol. 257 4 814 838 8636984 10.1006/jmbi.1996.0204 (Pubitemid 26117071)
15. K. Gallardo C. Job S.P. Groot M. Puype H. Demol J. Vandekerckhove D. Job 2002 Proteomics of Arabidopsis seed germination. A comparative study of wild-type and gibberellin-deficient seeds Plant Physiol. 129 2 823 837 12068122 10.1104/pp.002816 1:CAS:528:DC%2BD38XkvV2jt7c%3D (Pubitemid 34689164)
16. X. Gidrol W.S. Lin N. Dégousée S.F. Yip A. Kush 1994 Accumulation of reactive oxygen species and oxidation of cytokinin in germinating soybean seeds Eur. J. Biochem. 224 1 21 28 7521301 10.1111/j.1432-1033.1994.tb19990.x 1:CAS:528:DyaK2cXlslGhur4%3D (Pubitemid 24267100)
17. S.P. Gygi R. Aebersold 2000 Mass spectrometry and proteomics Curr. Opin. Chem. Biol. 4 5 489 494 11006534 10.1016/S1367-5931(00)00121-6 1:CAS:528:DC%2BD3cXnsFOku7w%3D
18. M. Hajduch A. Ganapathy J.W. Stein 2005 A systematic proteomic study of seed filling in soybean. Establishment of high-resolution two-dimensional reference maps, expression profiles, and an interactive proteome database Plant Physiol. 137 4 1397 1419 15824287 10.1104/pp.104.056614 1:CAS:528: DC%2BD2MXjslaqu7o%3D (Pubitemid 43119338)
19. M. Hamayun S.A. Khan Z.K. Shinwari A.L. Khan N. Ahmad I.J. Lee 2010 Effect of salt stress on growth attributes and endogenous growth hormones of soybean cultivar Hwangkeumkong Pak. J. Bot. 42 5 3103 3112 1:CAS:528: DC%2BC3MXhtVOiurg%3D
20. M. Hamayun S.A. Khan A.L. Khan J.H. Shin B. Ahmad D.H. Shin I.J. Lee 2010 Exogenous gibberellic acid reprograms soybean to higher growth and salt stress tolerance J. Agric. Food Chem. 58 12 7226 7232 20509656 10.1021/jf101221t 1:CAS:528:DC%2BC3cXmslSjt78%3D
21. Y.C. Hsing C.H. Tsou T.F. Hsu Z.Y. Chen K.L. Hsieh J.S. Hsieh T.Y. Chow 1998 Tissue- and stage-specific expression of a soybean (Glycine max L.) seed-maturation biotinylated protein Plant Mol. Biol. 38 3 481 490 9747855 10.1023/A:1006079926339 1:CAS:528:DyaK1cXmtFehtrc%3D (Pubitemid 28443578)
22. N. Imin T. Kerim J.J. Weinman B.G. Rolfe 2006 Low temperature treatment at the young microspore stage induces protein changes in rice anthers Mol. Cell. Proteom. 5 2 274 292 10.1074/mcp.M500242-MCP200 1:CAS:528:DC%2BD28XitVagsLg%3D (Pubitemid 43329306)
23. H. Itoh M. Matsuoka M. Camille 2003 A role for the ubiquitin-26S proteasome pathway in gibberellin signaling Trends Plant Sci. 8 10 492 497 14557046 10.1016/j.tplants.2003.08.002 1:CAS:528:DC%2BD3sXnvFShsrg%3D (Pubitemid 37325559)
24. M.J. Jeong S.C. Park M.O. Byun 2001 Improvement of salt tolerance in transgenic potato plants by glyceraldehyde-3-phosphate dehydrogenase gene transfer Mol. Cell 12 2 185 189 1:CAS:528:DC%2BD3MXot12mt7w%3D
25. G.X. Jia Z.Q. Zhu F.Q. Chang Y.X. Li 2002 Transformation of tomato with the BADH gene from Atriplex improves salt tolerance Plant Cell Rep. 21 2 141 146 10.1007/s00299-002-0489-1 1:CAS:528:DC%2BD38Xmt1Cgu7o%3D (Pubitemid 36053069)
26. S. Kaur A.K. Gupta N. Kaur 1998 Gibberellin A3 reverses the effect of salt stress in chickpea (Cicerarietinum L.) seedlings by enhancing amylase activity and mobilization of starch in cotyledons Plant Growth Regul. 26 2 85 90 10.1023/A:1006008711079 1:CAS:528:DyaK1MXisFGn (Pubitemid 28548223)
27. S.T. Kim S.Y. Kang Y. Wang S.G. Kim D.H. Hwang K.Y. Kang 2008 Analysis of embryonic proteome modulation by GA and ABA from germinating rice seeds Proteomics 8 17 3577 3587 18686304 10.1002/pmic.200800183 1:CAS:528: DC%2BD1cXhtFCgsrnJ
28. Levitt, J.; 1980. Responses of Plants to Environmental Stresses: Water, Radiation, Salt and Other Stresses. Academic Press, New York, Vol. 2, p.365-402.
29. S. Lobréaux T. Hardy J.F. Briat 1993 Abscisic acid is involved in the iron-induced synthesis of maize ferritin EMBO J. 12 2 651 657 8440255 (Pubitemid 23073712)
30. Q.Y. Luo B.J. Yu Y.L. Liu 2005 Differential sensitivity to chloride and sodium ions in seedlings of Glycine max and G. soja under NaCl stress J. Plant Physiol. 162 9 1003 1012 16173461 1:CAS:528:DC%2BD2MXhtFOnsLvN
31. K.A. Marrs 1996 The functions and regulation of glutathione S-transferases in plants Annu. Rev. Plant Physiol. Plant Mol. Biol. 47 1 127 158 15012285 10.1146/annurev.arplant.47.1.127 1:CAS:528:DyaK28XjtlWgsbo%3D
32. T. Masuda F. Goto T. Yoshihara 2001 A novel plant ferritin subunit from soybean that is related to a mechanism in iron release J. Biol. Chem. 276 22 19575 19579 11278898 10.1074/jbc.M011399200 1:CAS:528:DC%2BD3MXkt12rtL0%3D
33. B. McGonigle S.J. Keeler S.M.C. Lau 2000 A genomics approach to the comprehensive analysis of the glutathione S-transferase gene family in soybean and maize Plant Physiol. 124 3 1105 1120 11080288 10.1104/pp.124.3.1105 1:CAS:528:DC%2BD3cXotlWru7Y%3D
34. B.P. Mooney J.J. Thelen 2004 High-throughput peptide mass fingerprinting of soybean seed proteins: automated workflow and utility of UniGene expressed sequence tag databases for protein identification Phytochemistry 65 3 1733 1744 15276434 10.1016/j.phytochem.2004.04.011 1:CAS:528:DC%2BD2cXmtVequrg%3D (Pubitemid 38969919)
35. Morgan, P.W.; 1990. Effects of Abiotic Stresses on Plant Hormone Systems. In: Alscher, R.G.; Cumming, J.R. (Eds.), Stress Responses in Plants: Adaptation and Acclimation Mechanism. Wiley-Liss, New York.
36. R. Munns 2005 Genes and salt tolerance: bringing them together New Phytol. 167 3 645 660 16101905 10.1111/j.1469-8137.2005.01487.x 1:CAS:528:DC%2BD2MXhtVGisbfP (Pubitemid 43923804)
37. V. Neuhoff N. Arold D. Taube W. Ehrhardt 1988 Improved staining of proteins in polyacrylamide gels including isoelectric focusing gels with clear background at nanogram sensitivity using Coomassie Brilliant Blue G-250 and R-250 Electrophoresis 9 6 205 262 10.1002/elps.1150090603
38. M.Z. Nouri S. Komatsu 2010 Comparative analysis of soybean plasma membrane proteins under osmotic stress using gel-based and LC MS/MS-based proteomics approaches Proteomics 10 10 1930 1945 20209511 10.1002/pmic.200900632 1:CAS:528:DC%2BC3cXmtVyltbs%3D
39. Nouri, M.Z.; Toorchi, M.; Komatsu, S.; 2011. Proteomics Approach for Identifying Abiotic Stress Responsive Proteins in Soybean. In: Sudaric, A. (Ed.), Soybean-Molecular Aspects of Breeding. InTech, Croatia, p.187-214.
40. K. Ravet B. Touraine J. Boucherez J.F. Briat F. Gaymard F. Cellier 2009 Ferritins control interaction between iron homeostasis and oxidative stress in Arabidopsis Plant J. 57 3 400 412 18826427 10.1111/j.1365-313X.2008.03698.x 1:CAS:528:DC%2BD1MXit1KitLY%3D
41. V.P. Roxas R.K. Smith E.R. Allen 1997 Overexpression of glutathione S-transferase/glutathione peroxidase enhances the growth of transgenic tobacco seedlings during stress Nat. Biotechnol. 15 10 988 991 9335051 10.1038/nbt1097-988 1:CAS:528:DyaK2sXmsFKisL8%3D (Pubitemid 27425939)
42. H. Sassa S. Oguchi T. Inoue 2000 Primary structural features of the 20S proteasome subunits of rice (Oryza sativa) Gene 250 1-2 61 66 10854779 10.1016/S0378-1119(00)00190-6 1:CAS:528:DC%2BD3cXjvFKnsLo%3D (Pubitemid 30347480)
43. K. Skriver J. Mundy 1990 Gene expression in response to abscisic acid and osmotic stress Plant Cell 2 6 503 512 2152172 10.1105/tpc.2.6.503 1:CAS:528:DyaK3MXlvVyitw%3D%3D (Pubitemid 120029608)
44. J. Smalle R.D. Vierstra 2004 The ubiquitin 26S proteasome proteolytic pathway Annu. Rev. Plant Biol. 55 1 555 590 15377232 10.1146/annurev.arplant.55. 031903.141801 1:CAS:528:DC%2BD2cXlvFeisb4%3D (Pubitemid 38940944)
45. S.M. Smith 2002 Does the glyoxylate cycle have an anaplerotic function in plants? Trends Plant Sci. 7 1 12 13 11804821 10.1016/S1360-1385(01)02189-6 1:CAS:528:DC%2BD38XntlCktg%3D%3D (Pubitemid 34108193)
46. H. Sobhanian R. Razavizadeh Y. Nanjo A.A. Ehsanpour F. RastgarJazii N. Motamed S. Komatsu 2010 Proteome analysis of soybean leaves, hypocotyls and roots under salt stress Proteome Sci. 8 1 19 20350314 10.1186/1477-5956-8-19
47. M. Toorchi K. Yukawa M.Z. Nouri S. Komatsu 2009 Proteomics approach for identifying osmotic-stress-related proteins in soybean roots Peptides 30 12 2108 2117 19747515 10.1016/j.peptides.2009.09.006 1:CAS:528:DC%2BD1MXhsVKntL%2FE
48. T. Umezawa K. Shimizu M. Kato T. Ueda 2001 Effects of non-stomatal components on photosynthesis in soybean under salt stress Jpn. J. Trop. Agric. 45 1 57 63 1:CAS:528:DC%2BD3MXjvVyjsLc%3D
49. B.S. Watson V.S. Asirvatham L.J. Wang L.W. Sumner 2003 Mapping the proteome of Barrel Medic (Medicagotruncatula) Plant Physiol. 131 3 1104 1123 12644662 10.1104/pp.102.019034 (Pubitemid 36405301)
50. A.L. Wei Y.Z. Chen 2000 Effect of IAA on soybean seedling's membrance injury and salt resistance Acta Bot. Boreal. Occident. Sin. 20 3 410 414 1:CAS:528:DC%2BD3cXot1Kjsbg%3D
51. X.Y. Xu R. Zheng C.M. Li J.Y. Gai D.Y. Yu 2006 Differential proteomic analysis of seed germination in soybean Prog. Biochem. Biophys. 33 11 1106 1112 (Pubitemid 46433773)
52. L.U. Ying Y.R. Wu B. Han 2005 Anaerobic induction of isocitrate lyase and malate synthase in submerged rice seedlings indicates the important metabolic role of the glyoxylate cycle Acta Biochem. Biophys. Sin. 37 6 406 414 10.1111/j.1745-7270.2005.00060.x (Pubitemid 41329710)
53. Y. Zhen J.L. Qi S.S. Wang J. Su G.H. Xu M.S. Zhang L. Miao X.X. Peng D. Tian Y.H. Yang 2007 Comparative proteome analysis of differentially expressed proteins induced by Al toxicity in soybean Physiol. Plant. 131 4 542 554 18251846 10.1111/j.1399-3054.2007.00979.x 1:CAS:528:DC%2BD2sXhsVers7fL (Pubitemid 350076001)
54. J.K. Zhu 2002 Salt and drought stress signals transduction in plants Annu. Rev. Plant Biol. 53 1 247 273 12221975 10.1146/annurev.arplant.53.091401. 143329 1:CAS:528:DC%2BD38XlsVWhtbc%3D (Pubitemid 36257495)