-
1
-
-
0015917096
-
Electrophoretic variation in Escherichia coli from natural sources
-
10.1126/science.182.4116.1024 4584002
-
Electrophoretic variation in Escherichia coli from natural sources. R Milkman, Science 1973 182 116 1024 1026 10.1126/science.182.4116.1024 4584002
-
(1973)
Science
, vol.182
, Issue.116
, pp. 1024-1026
-
-
Milkman, R.1
-
2
-
-
0021367325
-
Standard reference strains of Escherichia coli from natural populations
-
Standard reference strains of Escherichia coli from natural populations. H Ochman, RK Selander, J Bacteriol 1984 157 2 690 693 6363394 (Pubitemid 14190968)
-
(1984)
Journal of Bacteriology
, vol.157
, Issue.2
, pp. 690-693
-
-
Ochman, H.1
Selander, R.K.2
-
4
-
-
0020960815
-
Enzyme polymorphism and genetic population structure in Escherichia coli and Shigella
-
Enzyme polymorphism and genetic population structure in Escherichia coli and Shigella. H Ochman, TS Whittam, DA Caugant, RK Selander, J Gen Microbiol 1983 129 9 2715 2726 6355392 (Pubitemid 13024810)
-
(1983)
Journal of General Microbiology
, vol.129
, Issue.9
, pp. 2715-2726
-
-
Ochman, H.1
Whittam, T.S.2
Caugant, D.A.3
Selander, R.K.4
-
5
-
-
0025096192
-
Phylogenetic distribution of branched RNA-linked multicopy single-stranded DNA among natural isolates of Escherichia coli
-
Phylogenetic distribution of branched RNA-linked multicopy single-stranded DNA among natural isolates of Escherichia coli. PJ Herzer, S Inouye, M Inouye, TS Whittam, J Bacteriol 1990 172 11 6175 6181 1699928 (Pubitemid 20372753)
-
(1990)
Journal of Bacteriology
, vol.172
, Issue.11
, pp. 6175-6181
-
-
Herzer, P.J.1
Inouye, S.2
Inouye, M.3
Whittam, T.S.4
-
6
-
-
0025788069
-
Recombination in Escherichia coli and the definition of biological species
-
1938920
-
Recombination in Escherichia coli and the definition of biological species. DE Dykhuizen, L Green, J Bacteriol 1991 173 22 7257 7268 1938920
-
(1991)
J Bacteriol
, vol.173
, Issue.22
, pp. 7257-7268
-
-
Dykhuizen, D.E.1
Green, L.2
-
7
-
-
0347093471
-
Decreasing the effects of horizontal gene transfer on bacterial phylogeny: The Escherichia coli case study
-
DOI 10.1016/S1055-7903(03)00181-7
-
Decreasing the effects of horizontal gene transfer on bacterial phylogeny: the Escherichia coli case study. P Escobar-Paramo, A Sabbagh, P Darlu, O Pradillon, C Vaury, E Denamur, G Lecointre, Mol Phylogenet Evol 2004 30 1 243 250 10.1016/S1055-7903(03)00181-7 15022774 (Pubitemid 38092532)
-
(2004)
Molecular Phylogenetics and Evolution
, vol.30
, Issue.1
, pp. 243-250
-
-
Escobar-Paramo, P.1
Sabbagh, A.2
Darlu, P.3
Pradillon, O.4
Vaury, C.5
Denamur, E.6
Lecointre, G.7
-
8
-
-
0028053174
-
Molecular genetic basis of allelic polymorphism in malate dehydrogenase (mdh) in natural populations of Escherichia coli and Salmonella enterica
-
Molecular genetic basis of allelic polymorphism in malate dehydrogenase (mdh) in natural populations of Escherichia coli and Salmonella enterica. EF Boyd, K Nelson, FS Wang, TS Whittam, RK Selander, Proc Natl Acad Sci USA 1994 91 4 1280 1284 10.1073/pnas.91.4.1280 8108402 (Pubitemid 24058994)
-
(1994)
Proceedings of the National Academy of Sciences of the United States of America
, vol.91
, Issue.4
, pp. 1280-1284
-
-
Boyd, E.F.1
Nelson, K.2
Wang, F.-S.3
Whittam, T.S.4
Selander, R.K.5
-
9
-
-
0030722947
-
Evolutionary genetics of the isocitrate dehydrogenase gene (icd) in Escherichia coli and Salmonella enterica
-
Evolutionary genetics of the isocitrate dehydrogenase gene (icd) in Escherichia coli and Salmonella enterica. FS Wang, TS Whittam, RK Selander, J Bacteriol 1997 179 21 6551 6559 9352899 (Pubitemid 27465284)
-
(1997)
Journal of Bacteriology
, vol.179
, Issue.21
, pp. 6551-6559
-
-
Wang, F.-S.1
Whittam, T.S.2
Selander, R.K.3
-
10
-
-
0026728291
-
Evolutionary genetics of the proline permease gene (putP) and the control region of the proline utilization operon in populations of Salmonella and Escherichia coli
-
1400239
-
Evolutionary genetics of the proline permease gene (putP) and the control region of the proline utilization operon in populations of Salmonella and Escherichia coli. K Nelson, RK Selander, J Bacteriol 1992 174 21 6886 6895 1400239
-
(1992)
J Bacteriol
, vol.174
, Issue.21
, pp. 6886-6895
-
-
Nelson, K.1
Selander, R.K.2
-
11
-
-
0025992890
-
Nucleotide polymorphism and evolution in the glyceraldehyde-3-phosphate dehydrogenase gene (gapA) in natural populations of Salmonella and Escherichia coli
-
Nucleotide polymorphism and evolution in the glyceraldehyde-3-phosphate dehydrogenase gene (gapA) in natural populations of Salmonella and Escherichia coli. K Nelson, TS Whittam, RK Selander, Proc Natl Acad Sci USA 1991 88 15 6667 6671 10.1073/pnas.88.15.6667 1862091 (Pubitemid 21915010)
-
(1991)
Proceedings of the National Academy of Sciences of the United States of America
, vol.88
, Issue.15
, pp. 6667-6671
-
-
Nelson, K.1
Whittam, T.S.2
Selander, R.K.3
-
12
-
-
0030834799
-
Size and sequence polymorphism in the isocitrate dehydrogenase kinase/phosphatase gene (aceK) and flanking regions in Salmonella enterica and Escherichia coli
-
Size and sequence polymorphism in the isocitrate dehydrogenase kinase/phosphatase gene (aceK) and flanking regions in Salmonella enterica and Escherichia coli. K Nelson, FS Wang, EF Boyd, RK Selander, Genetics 1997 147 4 1509 1520 9409817 (Pubitemid 27525449)
-
(1997)
Genetics
, vol.147
, Issue.4
, pp. 1509-1520
-
-
Nelson, K.1
Wang, F.-S.2
Boyd, E.F.3
Seiander, R.K.4
-
13
-
-
60549112381
-
Phylogenetic and genomic diversity of human bacteremic Escherichia coli strains
-
10.1186/1471-2164-9-560 19036134
-
Phylogenetic and genomic diversity of human bacteremic Escherichia coli strains. F Jaureguy, L Landraud, V Passet, L Diancourt, E Frapy, G Guigon, E Carbonnelle, O Lortholary, O Clermont, E Denamur, et al. BMC Genomics 2008 9 560 10.1186/1471-2164-9-560 19036134
-
(2008)
BMC Genomics
, vol.9
, pp. 560
-
-
Jaureguy, F.1
Landraud, L.2
Passet, V.3
Diancourt, L.4
Frapy, E.5
Guigon, G.6
Carbonnelle, E.7
Lortholary, O.8
Clermont, O.9
Denamur, E.10
-
14
-
-
34547702305
-
Genetic diversity and population structure of Escherichia coli isolated from freshwater beaches
-
DOI 10.1111/j.1462-2920.2007.01341.x
-
Genetic diversity and population structure of Escherichia coli isolated from freshwater beaches. ST Walk, EW Alm, LM Calhoun, JM Mladonicky, TS Whittam, Environ Microbiol 2007 9 9 2274 2288 10.1111/j.1462-2920.2007.01341.x 17686024 (Pubitemid 47222119)
-
(2007)
Environmental Microbiology
, vol.9
, Issue.9
, pp. 2274-2288
-
-
Walk, S.T.1
Alm, E.W.2
Calhoun, L.M.3
Mladonicky, J.M.4
Whittam, T.S.5
-
15
-
-
33745282930
-
Sex and virulence in Escherichia coli: An evolutionary perspective
-
10.1111/j.1365-2958.2006.05172.x 16689791
-
Sex and virulence in Escherichia coli: an evolutionary perspective. T Wirth, D Falush, R Lan, F Colles, P Mensa, LH Wieler, H Karch, PR Reeves, MC Maiden, H Ochman, et al. Mol Microbiol 2006 60 5 1136 1151 10.1111/j.1365-2958. 2006.05172.x 16689791
-
(2006)
Mol Microbiol
, vol.60
, Issue.5
, pp. 1136-1151
-
-
Wirth, T.1
Falush, D.2
Lan, R.3
Colles, F.4
Mensa, P.5
Wieler, L.H.6
Karch, H.7
Reeves, P.R.8
Maiden, M.C.9
Ochman, H.10
-
16
-
-
33746438839
-
Phylogenetic relationships among clonal groups of extraintestinal pathogenic Escherichia coli as assessed by multi-locus sequence analysis
-
DOI 10.1016/j.micinf.2006.02.007, PII S1286457906001134
-
Phylogenetic relationships among clonal groups of extraintestinal pathogenic Escherichia coli as assessed by multi-locus sequence analysis. JR Johnson, KL Owens, CR Clabots, SJ Weissman, SB Cannon, Microbes Infect 2006 8 7 1702 1713 10.1016/j.micinf.2006.02.007 16820314 (Pubitemid 44128872)
-
(2006)
Microbes and Infection
, vol.8
, Issue.7
, pp. 1702-1713
-
-
Johnson, J.R.1
Owens, K.L.2
Clabots, C.R.3
Weissman, S.J.4
Cannon, S.B.5
-
17
-
-
59249089471
-
Organised genome dynamics in the Escherichia coli species results in highly diverse adaptive paths
-
10.1371/journal.pgen.1000344 19165319
-
Organised genome dynamics in the Escherichia coli species results in highly diverse adaptive paths. M Touchon, C Hoede, O Tenaillon, V Barbe, S Baeriswyl, P Bidet, E Bingen, S Bonacorsi, C Bouchier, O Bouvet, et al. PLoS Genet 2009 5 1 1000344 10.1371/journal.pgen.1000344 19165319
-
(2009)
PLoS Genet
, vol.5
, Issue.1
, pp. 51000344
-
-
Touchon, M.1
Hoede, C.2
Tenaillon, O.3
Barbe, V.4
Baeriswyl, S.5
Bidet, P.6
Bingen, E.7
Bonacorsi, S.8
Bouchier, C.9
Bouvet, O.10
-
18
-
-
51649120558
-
Assigning Escherichia coli strains to phylogenetic groups: Multi-locus sequence typing versus the PCR triplex method
-
10.1111/j.1462-2920.2008.01669.x 18518895
-
Assigning Escherichia coli strains to phylogenetic groups: multi-locus sequence typing versus the PCR triplex method. DM Gordon, O Clermont, H Tolley, E Denamur, Environ Microbiol 2008 10 10 2484 2496 10.1111/j.1462-2920.2008. 01669.x 18518895
-
(2008)
Environ Microbiol
, vol.10
, Issue.10
, pp. 2484-2496
-
-
Gordon, D.M.1
Clermont, O.2
Tolley, H.3
Denamur, E.4
-
19
-
-
0035961748
-
Complete genome sequence of enterohemorrhagic Eschelichia coli O157:H7 and genomic comparison with a laboratory strain K-12
-
Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12. T Hayashi, K Makino, M Ohnishi, K Kurokawa, K Ishii, K Yokoyama, CG Han, E Ohtsubo, K Nakayama, T Murata, et al. DNA Res 2001 8 1 11 22 10.1093/dnares/8.1.11 11258796 (Pubitemid 33617542)
-
(2001)
DNA Research
, vol.8
, Issue.1
, pp. 11-22
-
-
Hayashi, T.1
Makino, K.2
Ohnishi, M.3
Kurokawa, K.4
Ishii, K.5
Yokoyama, K.6
Han, C.-G.7
Ohtsubo, E.8
Nakayama, K.9
Murata, T.10
Tanaka, M.11
Tobe, T.12
Iida, T.13
Takami, H.14
Honda, T.15
Sasakawa, C.16
Ogasawara, N.17
Yasunaga, T.18
Kuhara, S.19
Shiba, T.20
Hattori, M.21
Shinagawa, H.22
more..
-
20
-
-
0035945586
-
Genome sequence of enterohaemorrhagic Escherichia coli O157:H7
-
DOI 10.1038/35054089
-
Genome sequence of enterohaemorrhagic Escherichia coli O157:H7. NT Perna, G Plunkett, V Burland, B Mau, JD Glasner, DJ Rose, GF Mayhew, PS Evans, J Gregor, HA Kirkpatrick, et al. Nature 2001 409 6819 529 533 10.1038/35054089 11206551 (Pubitemid 32144360)
-
(2001)
Nature
, vol.409
, Issue.6819
, pp. 529-533
-
-
Perna, N.T.1
Plunkett, G.2
Burland, V.3
Mau, B.4
Glasner, J.D.5
Rose, D.J.6
Mayhew, G.F.7
Evans, P.S.8
Gregor, J.9
Kirkpatrick, H.A.10
Posfai, G.11
Hackett, J.12
Klink, S.13
Boutin, A.14
Shao, Y.15
Miller, L.16
Grotbeck, E.J.17
Davis, N.W.18
Lim, A.19
Dimalanta, E.T.20
Potamousis, K.D.21
Apodaca, J.22
Anantharaman, T.S.23
Lin, J.24
Yen, G.25
Schwartz, D.C.26
Welch, R.A.27
Blattner, F.R.28
more..
-
21
-
-
0033758756
-
Pathogenicity islands and the evolution of microbes
-
10.1146/annurev.micro.54.1.641 11018140
-
Pathogenicity islands and the evolution of microbes. J Hacker, JB Kaper, Annu Rev Microbiol 2000 54 641 679 10.1146/annurev.micro.54.1.641 11018140
-
(2000)
Annu Rev Microbiol
, vol.54
, pp. 641-679
-
-
Hacker, J.1
Kaper, J.B.2
-
22
-
-
0031741481
-
Escherichia coli molecular phylogeny using the incongruence length difference test
-
Escherichia coli molecular phylogeny using the incongruence length difference test. G Lecointre, L Rachdi, P Darlu, E Denamur, Mol Biol Evol 1998 15 12 1685 1695 9866203 (Pubitemid 28550992)
-
(1998)
Molecular Biology and Evolution
, vol.15
, Issue.12
, pp. 1685-1695
-
-
LeCointre, G.1
Rachdi, L.2
Darlu, P.3
Denamur, E.4
-
23
-
-
35848958139
-
Extraintestinal virulence is a coincidental by-product of commensalism in b2 phylogenetic group Escherichia coli strains
-
DOI 10.1093/molbev/msm172
-
Extraintestinal virulence is a coincidental by-product of commensalism in B2 phylogenetic group Escherichia coli strains. T Le Gall, O Clermont, S Gouriou, B Picard, X Nassif, E Denamur, O Tenaillon, Mol Biol Evol 2007 24 11 2373 2384 10.1093/molbev/msm172 17709333 (Pubitemid 350060443)
-
(2007)
Molecular Biology and Evolution
, vol.24
, Issue.11
, pp. 2373-2384
-
-
Le Gall, T.1
Clermont, O.2
Gouriou, S.3
Picard, B.4
Nassif, X.5
Denamur, E.6
Tenaillon, O.7
-
24
-
-
2442667673
-
A specific genetic background is required for acquisition and expression of virulence factors in Escherichia coli
-
DOI 10.1093/molbev/msh118
-
A specific genetic background is required for acquisition and expression of virulence factors in Escherichia coli. P Escobar-Paramo, O Clermont, AB Blanc-Potard, H Bui, C Le Bouguenec, E Denamur, Mol Biol Evol 2004 21 6 1085 1094 10.1093/molbev/msh118 15014151 (Pubitemid 38658217)
-
(2004)
Molecular Biology and Evolution
, vol.21
, Issue.6
, pp. 1085-1094
-
-
Escobar-Paramo, P.1
Clermont, O.2
Blanc-Potard, A.-B.3
Bui, H.4
Le Bouguenec, C.5
Denamur, E.6
-
25
-
-
4644231373
-
Large-scale population structure of human commensal Escherichia coli isolates
-
DOI 10.1128/AEM.70.9.5698-5700.2004
-
Large-scale population structure of human commensal Escherichia coli isolates. P Escobar-Paramo, K Grenet, A Le Menac'h, L Rode, E Salgado, C Amorin, S Gouriou, B Picard, MC Rahimy, A Andremont, et al. Appl Environ Microbiol 2004 70 9 5698 5700 10.1128/AEM.70.9.5698-5700.2004 15345464 (Pubitemid 39279653)
-
(2004)
Applied and Environmental Microbiology
, vol.70
, Issue.9
, pp. 5698-5700
-
-
Escobar-Paramo, P.1
Grenet, K.2
Le Menac'h, A.3
Rode, L.4
Salgado, E.5
Amorin, C.6
Gouriou, S.7
Picard, B.8
Rahimy, M.C.9
Andremont, A.10
Denamur, E.11
Ruimy, R.12
-
26
-
-
0003651227
-
-
Distributed by the author, Department of Mathematics, Washington University in St. Louis http://www.math.wustl.edu/∼sawyer
-
GENECONV: A computer package for the statistical detection of gene conversion. SA Sawyer, Distributed by the author, Department of Mathematics, Washington University in St. Louis 1999 http://www.math.wustl.edu/∼sawyer
-
(1999)
GENECONV: A Computer Package for the Statistical Detection of Gene Conversion
-
-
Sawyer, S.A.1
-
27
-
-
33745112085
-
Genome-wide detection and analysis of homologous recombination among sequenced strains of Escherichia coli
-
DOI 10.1186/gb-2006-7-5-r44
-
Genome-wide detection and analysis of homologous recombination among sequenced strains of Escherichia coli. B Mau, JD Glasner, AE Darling, NT Perna, Genome Biol 2006 7 5 44 10.1186/gb-2006-7-5-r44 16737554 (Pubitemid 43885060)
-
(2006)
Genome Biology
, vol.7
, Issue.5
-
-
Mau, B.1
Glasner, J.D.2
Darling, A.E.3
Perna, N.T.4
-
29
-
-
34548246020
-
Temporal fragmentation of speciation in bacteria
-
DOI 10.1126/science.1144876
-
Temporal fragmentation of speciation in bacteria. AC Retchless, JG Lawrence, Science 2007 317 5841 1093 1096 10.1126/science.1144876 17717188 (Pubitemid 47330195)
-
(2007)
Science
, vol.317
, Issue.5841
, pp. 1093-1096
-
-
Retchless, A.C.1
Lawrence, J.G.2
-
31
-
-
67149119196
-
Hyper-recombination, diversity, and antibiotic resistance in pneumococcus
-
10.1126/science.1171908 19520963
-
Hyper-recombination, diversity, and antibiotic resistance in pneumococcus. WP Hanage, C Fraser, J Tang, TR Connor, J Corander, Science 2009 324 5933 1454 1457 10.1126/science.1171908 19520963
-
(2009)
Science
, vol.324
, Issue.5933
, pp. 1454-1457
-
-
Hanage, W.P.1
Fraser, C.2
Tang, J.3
Connor, T.R.4
Corander, J.5
-
33
-
-
23944437942
-
Re-evaluating prokaryotic species
-
DOI 10.1038/nrmicro1236
-
Opinion: Re-evaluating prokaryotic species. D Gevers, FM Cohan, JG Lawrence, BG Spratt, T Coenye, EJ Feil, E Stackebrandt, Y Van de Peer, P Vandamme, FL Thompson, et al. Nat Rev Microbiol 2005 3 9 733 739 10.1038/nrmicro1236 16138101 (Pubitemid 41195089)
-
(2005)
Nature Reviews Microbiology
, vol.3
, Issue.9
, pp. 733-739
-
-
Gevers, D.1
Cohan, F.M.2
Lawrence, J.G.3
Spratt, B.G.4
Coenye, T.5
Feil, E.J.6
Stackebrandt, E.7
Van De Peer, Y.8
Vandamme, P.9
Thompson, F.L.10
Swings, J.11
-
34
-
-
0036407157
-
What are bacterial species?
-
DOI 10.1146/annurev.micro.56.012302.160634
-
What are bacterial species? FM Cohan, Annu Rev Microbiol 2002 56 457 487 10.1146/annurev.micro.56.012302.160634 12142474 (Pubitemid 35217463)
-
(2002)
Annual Review of Microbiology
, vol.56
, pp. 457-487
-
-
Cohan, F.M.1
-
35
-
-
0030924545
-
Molecular keys to speciation: DNA polymorphism and the control of genetic exchange in enterobacteria
-
DOI 10.1073/pnas.94.18.9763
-
Molecular keys to speciation: DNA polymorphism and the control of genetic exchange in enterobacteria. M Vulic, F Dionisio, F Taddei, M Radman, Proc Natl Acad Sci USA 1997 94 18 9763 9767 10.1073/pnas.94.18.9763 9275198 (Pubitemid 27408137)
-
(1997)
Proceedings of the National Academy of Sciences of the United States of America
, vol.94
, Issue.18
, pp. 9763-9767
-
-
Vulic, M.1
Dionisio, F.2
Taddei, F.3
Radman, M.4
-
36
-
-
77954912139
-
Phylogenetic incongruence arising from fragmented speciation in enteric bacteria
-
10.1073/pnas.1001291107 20534528
-
Phylogenetic incongruence arising from fragmented speciation in enteric bacteria. AC Retchless, JG Lawrence, Proc Natl Acad Sci USA 2010 107 25 11453 11458 10.1073/pnas.1001291107 20534528
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, Issue.25
, pp. 11453-11458
-
-
Retchless, A.C.1
Lawrence, J.G.2
-
37
-
-
70349944351
-
Cryptic lineages of the genus Escherichia
-
10.1128/AEM.01262-09 19700542
-
Cryptic lineages of the genus Escherichia. ST Walk, EW Alm, DM Gordon, JL Ram, GA Toranzos, JM Tiedje, TS Whittam, Appl Environ Microbiol 2009 75 20 6534 6544 10.1128/AEM.01262-09 19700542
-
(2009)
Appl Environ Microbiol
, vol.75
, Issue.20
, pp. 6534-6544
-
-
Walk, S.T.1
Alm, E.W.2
Gordon, D.M.3
Ram, J.L.4
Toranzos, G.A.5
Tiedje, J.M.6
Whittam, T.S.7
-
38
-
-
0028605344
-
Clonal divergence in Escherichia coli as a result of recombination, not mutation
-
10.1126/science.7973728 7973728
-
Clonal divergence in Escherichia coli as a result of recombination, not mutation. DS Guttman, DE Dykhuizen, Science 1994 266 5189 1380 1383 10.1126/science.7973728 7973728
-
(1994)
Science
, vol.266
, Issue.5189
, pp. 1380-1383
-
-
Guttman, D.S.1
Dykhuizen, D.E.2
-
39
-
-
66649094404
-
A precise reconstruction of the emergence and constrained radiations of Escherichia coli O157 portrayed by backbone concatenomic analysis
-
19439656
-
A precise reconstruction of the emergence and constrained radiations of Escherichia coli O157 portrayed by backbone concatenomic analysis. SR Leopold, V Magrini, NJ Holt, N Shaikh, ER Mardis, J Cagno, Y Ogura, A Iguchi, T Hayashi, A Mellmann, et al. Proc Natl Acad Sci USA 2009 106 21 8713 8718 19439656
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, Issue.21
, pp. 8713-8718
-
-
Leopold, S.R.1
Magrini, V.2
Holt, N.J.3
Shaikh, N.4
Mardis, E.R.5
Cagno, J.6
Ogura, Y.7
Iguchi, A.8
Hayashi, T.9
Mellmann, A.10
-
40
-
-
33645827531
-
Identification of genes subject to positive selection in uropathogenic strains of Escherichia coli: A comparative genomics approach
-
10.1073/pnas.0600938103 16585510
-
Identification of genes subject to positive selection in uropathogenic strains of Escherichia coli: a comparative genomics approach. SL Chen, CS Hung, J Xu, CS Reigstad, V Magrini, A Sabo, D Blasiar, T Bieri, RR Meyer, P Ozersky, et al. Proc Natl Acad Sci USA 2006 103 15 5977 5982 10.1073/pnas.0600938103 16585510
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, Issue.15
, pp. 5977-5982
-
-
Chen, S.L.1
Hung, C.S.2
Xu, J.3
Reigstad, C.S.4
Magrini, V.5
Sabo, A.6
Blasiar, D.7
Bieri, T.8
Meyer, R.R.9
Ozersky, P.10
-
41
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
DOI 10.1093/nar/25.17.3389
-
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. SF Altschul, TL Madden, AA Schaffer, J Zhang, Z Zhang, W Miller, DJ Lipman, Nucleic Acids Res 1997 25 17 3389 3402 10.1093/nar/25.17.3389 9254694 (Pubitemid 27359211)
-
(1997)
Nucleic Acids Research
, vol.25
, Issue.17
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
42
-
-
0027968068
-
CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. JD Thompson, DG Higgins, TJ Gibson, Nucleic Acids Res 1994 22 22 4673 4680 10.1093/nar/22.22.4673 7984417 (Pubitemid 24354800)
-
(1994)
Nucleic Acids Research
, vol.22
, Issue.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
43
-
-
34547781750
-
MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0
-
DOI 10.1093/molbev/msm092
-
MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. K Tamura, J Dudley, M Nei, S Kumar, Mol Biol Evol 2007 24 8 1596 1599 10.1093/molbev/msm092 17488738 (Pubitemid 47236692)
-
(2007)
Molecular Biology and Evolution
, vol.24
, Issue.8
, pp. 1596-1599
-
-
Tamura, K.1
Dudley, J.2
Nei, M.3
Kumar, S.4
-
44
-
-
74549125386
-
SeaView version 4: A multiplatform graphical user interface for sequence alignment and phylogenetic tree building
-
SeaView version 4: A multiplatform graphical user interface for sequence alignment and phylogenetic tree building. M Gouy, S Guindon, O Gascuel, Mol Biol Evol 27 2 221 224
-
Mol Biol Evol
, vol.27
, Issue.2
, pp. 221-224
-
-
Gouy, M.1
Guindon, S.2
Gascuel, O.3
-
45
-
-
30744470609
-
Application of phylogenetic networks in evolutionary studies
-
DOI 10.1093/molbev/msj030
-
Application of phylogenetic networks in evolutionary studies. DH Huson, D Bryant, Mol Biol Evol 2006 23 2 254 267 16221896 (Pubitemid 43100040)
-
(2006)
Molecular Biology and Evolution
, vol.23
, Issue.2
, pp. 254-267
-
-
Huson, D.H.1
Bryant, D.2
|