Identification of lethal Aspergillus at early growth stages based on matrix-assisted laser desorption/ionization time-of-flight mass spectrometry

Diagnostic Microbiology and Infectious Disease

Volumn 70, Issue 3, 2011, Pages 344-354

  Pan, Yong Li ^a   Chow, Nan Haw ^b   Chang, Tsung Chain ^a   Chang, Hsien Chang ^a  

^a NATIONAL CHENG KUNG UNIVERSITY   (Taiwan)

^b NATIONAL CHENG KUNG UNIVERSITY HOSPITAL   (Taiwan)

Author keywords

Asexual sporulation; Aspergillus; Invasive aspergillosis; MALDI TOF mass spectrometry; Mass to charge (m z) ratio; Trifluoroacetic acid extraction

Indexed keywords

FERULIC ACID; FUNGAL PROTEIN; TRIFLUOROACETIC ACID;

ARTICLE; ASPERGILLUS; ASPERGILLUS FUMIGATUS; FUNGAL STRAIN; FUNGUS GROWTH; FUNGUS HYPHAE; FUNGUS IDENTIFICATION; MATRIX ASSISTED LASER DESORPTION IONIZATION TIME OF FLIGHT MASS SPECTROMETRY; NONHUMAN; PRIORITY JOURNAL; PROTEIN EXPRESSION; REPRODUCIBILITY; SPECIES DIFFERENCE; SPOROGENESIS; STRAIN DIFFERENCE;

ASPERGILLOSIS; ASPERGILLUS; EARLY DIAGNOSIS; FUNGAL PROTEINS; HUMANS; MICROBIOLOGICAL TECHNIQUES; SPECTROMETRY, MASS, MATRIX-ASSISTED LASER DESORPTION-IONIZATION;

EID: 79959213089     PISSN: 07328893     EISSN: 18790070     Source Type: Journal    
DOI: 10.1016/j.diagmicrobio.2011.03.007     Document Type: Article

References (53)

1. Adams T.H., Wieser J.K., Yu J.H. Asexual sporulation in Aspergillus nidulans. Microbiol. Mol. Biol. Rev. 1998, 62:35-54.
2. Aebersold R., Mann M. Mass spectrometry-based proteomics. Nature 2003, 422:198-207.
3. Aimanianda V., Bayry J., Bozza S., Kniemeyer O., Perruccio K., Elluru S.R., Clavaud C., Paris S., Brakhage A.A., Kaveri S.V., Romani L., Latgé J.P. Surface hydrophobin prevents immune recognition of airborne fungal spores. Nature 2009, 460:1117-1121.
4. Alanio A., Beretti J.L., Dauphin B., Mellado E., Quesne G., Lacroix C., Amara A., Berche P., Nassif X., Bougnoux M.E. MALDI-TOF Mass spectrometry for fast and accurate identification of clinically relevant Aspergillus species. Clin. Microbiol. Infect. 2011, [Epub ahead of print].
5. Amiri-Eliasi B., Fenselau C. Characterization of protein biomarkers desorbed by MALDI from whole fungal cells. Anal. Chem. 2001, 73:5228-5231.
6. Barnes P.D., Marr K.A. Aspergillosis: spectrum of disease, diagnosis, and treatment. Infect. Dis. Clin. North. Am. 2006, 20:545-561.
7. Beavis R.C., Chait B.T. Cinnamic acid derivatives as matrices for ultraviolet laser desorption mass spectrometry of proteins. Rapid. Commun. Mass. Spectrom. 1989, 3:432-435.
8. Bizzini A., Greub G. Matrix-assisted laser desorption ionization time-of-flight mass spectrometry, a revolution in clinical microbial identification. Clin. Microbiol. Infect. 2010, 16:1614-1619.
9. Buskirk A.D., Hettick J.M., Chipinda I., Law B.F., Siegel P.D., Slaven J.E., Green B.J., Beezhold D.H. Fungal pigments inhibit the MALDI-TOF mass spectrometry analysis of darkly pigmented fungi. Anal. Biochem. 2011, 411:122-128.
10. Carbonnelle E., Beretti J.L., Cottyn S., Quesne G., Berche P., Nassif X., Ferroni A. Rapid identification of staphylococci isolated in clinical microbiology laboratories by matrix-assisted laser desorption ionization-time of flight mass spectrometry. J. Clin. Microbiol. 2007, 45:2156-2161.
11. Chen W.J., Tsai P.J., Chen Y.C. Functional nanoparticle-based proteomic strategies for characterization of pathogenic bacteria. Anal. Chem. 2008, 80:9612-9621.
12. Christner M., Rohde H., Wolters M., Sobottka I., Wegscheider K., Aepfelbacher M. Rapid identification of bacteria from positive blood culture bottles by use of matrix-assisted laser desorption-ionization time of flight mass spectrometry fingerprinting. J. Clin. Microbiol. 2010, 48:1584-1591.
13. Cummings J.R., Jamison G.R., Boudreaux J.W., Howles M.J., Walsh T.J., Hayden R.T. Cross-reactivity of non-Aspergillus fungal species in the Aspergillus galactomannan enzyme immunoassay. Diagn. Microbiol. Infect. Dis. 2007, 59:113-115.
14. Demirev P.A., Ho Y.P., Ryzhov V., Fenselau C. Microorganism identification by mass spectrometry and protein database searches. Anal. Chem. 1999, 71:2732-2738.
15. De Respinis S., Vogel G., Benagli C., Tonolla M., Petrini O., Samuels G.J. MALDI-TOF MS of trichoderma: a model system for the identification of microfungi. Mycol. Prog. 2009, 9:79-100.
16. Eckert D.J., Sampath R., Li H., Massire C., Matthews H.E., Toleno D., Hall T.A., Blyn L.B., Eshoo M.W., Ranken R., Hofstadler S.A., Tang Y.W. New technology for rapid molecular diagnosis of bloodstream infections. Expert. Rev. Mol. Diagn. 2010, 10:399-415.
17. Emonet S., Shah H.N., Cherkaoui A., Schrenzel J. Application and use of various mass spectrometry methods in clinical microbiology. Clin. Microbiol. Infect. 2010, 16:1604-1613.
18. Fox K., Fox A., Rose J., Walla M. Speciation of coagulase negative staphylococci, isolated from indoor air, using SDS page gel bands of expressed proteins followed by MALDI TOF MS and MALDI TOF-TOF MS-MS analysis of tryptic peptides. J. Microbiol. Methods. 2011, 84:243-250.
19. Genzen J.R., Kenney B. Central nervous system Aspergillus infection after epidural analgesia: diagnosis, therapeutic challenges, and literature review. Diagn. Microbiol. Infect. Dis. 2009, 65:312-318.
20. Giebel R., Worden C., Rust S.M., Kleinheinz G.T., Robbins M., Sandrin T.R. Microbial fingerprinting using matrix-assisted laser desorption ionization time-of-flight mass spectrometry (MALDI-TOF MS): applications and challenges. Adv. Appl. Microbiol. 2010, 71:149-184.
21. Herbrecht R., Denning D.W., Patterson T.F., Bennett J.E., Greene R.E., Oestmann J.W., Kern W.V., Marr K.A., Ribaud P., Lortholary O., Sylvester R., Rubin R.H., Wingard J.R., Stark P., Durand C., Caillot D., Thiel E., Chandrasekar P.H., Hodges M.R., Schlamm H.T., Troke P.F., de Pauw B. Voriconazole versus amphotericin B for primary therapy of invasive aspergillosis. N. Engl. J. Med. 2002, 347:408-415.
22. Hettick J.M., Green B.J., Buskirk A.D., Kashon M.L., Slaven J.E., Janotka E., Blachere F.M., Schmechel D., Beezhold D.H. Discrimination of Aspergillus isolates at the species and strain level by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry fingerprinting. Anal. Biochem. 2008, 380:276-281.
23. Ho Y.P., Reddy P.M. Mass spectrometry-based approaches for the detection of proteins of Staphylococcus species. Infect. Disord. Drug. Targets. 2008, 8:166-182.
24. Hope W.W., Walsh T.J., Denning D.W. Laboratory diagnosis of invasive aspergillosis. Lancet. Infect. Dis. 2005, 5:609-622.
25. Horká M., Ružicka F., Kubesová A., Holá V., Šlais K. Capillary electrophoresis of conidia from cultivated microscopic filamentous fungi. Anal. Chem. 2009, 81:3997-4004.
26. Horneffer V., Haverkamp J., Janssen H.G., Notz R. MALDI-TOF-MS analysis of bacterial spores: wet heat-treatment as a new releasing technique for biomarkers and the influence of different experimental parameters and microbiological handling. J. Am. Soc. Mass. Spectrom. 2004, 15:1444-1454.
27. Hsieh S.Y., Tseng C.L., Lee Y.S., Kuo A.J., Sun C.F., Lin Y.H., Chen J.K. Highly efficient classification and identification of human pathogenic bacteria by MALDI-TOF MS. Mol. Cell. Proteomics. 2008, 7:448-456.
28. Katz J.J. Anhydrous trifluoroacetic acid as a solvent for proteins. Nature 1954, 174:509.
29. Larone D.H. Medically important fungi: a guide to identification 1995, 190-192. ASM Press, Washington, D.C.
30. Lasch P., Beyer W., Nattermann H., Stämmler M., Siegbrecht E., Grunow R., Naumann D. Identification of Bacillus anthracis by using matrix-assisted laser desorption ionization-time of flight mass spectrometry and artificial neural networks. Appl. Environ. Microbiol. 2009, 75:7229-7242.
31. Lasch P., Nattermann H., Erhard M., Stämmler M., Grunow R., Bannert N., Appel B., Naumann D. MALDI-TOF mass spectrometry compatible inactivation method for highly pathogenic microbial cells and spores. Anal. Chem. 2008, 80:2026-2034.
32. Lay J.O. MALDI-TOF mass spectrometry of bacteria. Mass. Spectrom. Rev. 2001, 20:172-194.
33. Li T.Y., Liu B.H., Chen Y.C. Characterization of Aspergillus spores by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. Rapid. Commun. Mass. Spectrom. 2000, 14:2393-2400.
34. Müller F.M.C., Trusen A., Weig M. Clinical manifestations and diagnosis of invasive aspergillosis in immunocompromised children. Eur. J. Pediatr. 2002, 161:563-574.
35. Madonna A.J., Basile F., Ferrer I., Meetani M.A., Rees J.C., Voorhees K.J. On-probe sample pretreatment for the detection of proteins above 15 kDa from whole cell bacteria by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. Rapid. Commun. Mass. Spectrom. 2000, 14:2220-2229.
36. Marklein G., Josten M., Klanke U., Müller E., Horré R., Maier T., Wenzel T., Kostrzewa M., Bierbaum G., Hoerauf A., Sahl H.G. Matrix-assisted laser desorption ionization-time of flight mass spectrometry for fast and reliable identification of clinical yeast isolates. J. Clin. Microbiol. 2009, 47:2912-2917.
37. Meetani M.A., Voorhees K.J. MALDI mass spectrometry analysis of high molecular weight proteins from whole bacterial cells: pretreatment of samples with surfactants. J. Am. Soc. Mass. Spectrom. 2005, 16:1422-1426.
38. Mellmann A., Cloud J., Maier T., Keckevoet U., Ramminger I., Iwen P., Dunn J., Hall G., Wilson D., LaSala P., Kostrzewa M., Harmsen D. Evaluation of matrix-assisted laser desorption ionization-time-of-flight mass spectrometry in comparison to 16S rRNA gene sequencing for species identification of nonfermenting bacteria. J. Clin. Microbiol. 2008, 46:1946-1954.
39. Morgan J., Wannemuehler K.A., Marr K.A., Hadley S., Kontoyiannis D.P., Walsh T.J., Fridkin S.K., Pappas P.G., Warnock D.W. Incidence of invasive aspergillosis following hematopoietic stem cell and solid organ transplantation: interim results of a prospective multicenter surveillance program. Med. Mycol. 2005, 43:49-58.
40. Murray P.R. Rapid identification of clinical yeast isolates by mass spectrometry. Curr. Fungal. Infect. Rep. 2010, 4:145-150.
41. Neuhof T., Dieckmann R., Druzhinina I.S., Kubicek C.P., Nakari-Setälä T., Penttilä M., von Döhren H. Direct identification of hydrophobins and their processing in Trichoderma using intact-cell MALDI-TOF MS. FEBS. J. 2007, 274:841-852.
42. Polson C., Sarkar P., Incledon B., Raguvaran V., Grant R. Optimization of protein precipitation based upon effectiveness of protein removal and ionization effect in liquid chromatography-tandem mass spectrometry. J. Chromatogr. B. 2003, 785:263-275.
43. Qian J., Cutler J.E., Cole R.B., Cai Y. MALDI-TOF mass signatures for differentiation of yeast species, strain grouping and monitoring of morphogenesis markers. Anal. Bioanal. Chem. 2008, 392:439-449.
44. Santos C., Paterson R.R.M., Venâncio A., Lima N. Filamentous fungal characterizations by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. J. Appl. Microbiol. 2010, 108:375-385.
45. Sauer S., Kliem M. Mass spectrometry tools for the classification and identification of bacteria. Nat. Rev. Microbiol. 2010, 8:74-82.
46. Segal B.H. Aspergillosis. N. Engl. J. Med. 2009, 360:1870-1884.
47. Steinbach W.J., Benjamin D.K., Kontoyiannis D.P., Perfect J.R., Lutsar I., Marr K.A., Lionakis M.S., Torres H.A., Jafri H., Walsh T.J. Infections due to Aspergillus terreus: a multicenter retrospective analysis of 83 cases. Clin. Infect. Dis. 2004, 39:192-198.
48. Sulc M., Peslova K., Zabka M., Hajduch M., Havlicek V. Biomarkers of Aspergillus spores: strain typing and protein identification. Int. J. Mass Spectrom. 2009, 280:162-168.
49. Theodore S., Liava'a M., Antippa P., Wynne R., Grigg A., Slavin M., Tatoulis J. Surgical management of invasive pulmonary fungal infection in hematology patients. Ann. Thorac. Surg. 2009, 87:1532-1538.
50. Thompson I.I.I.G.R., Cadena J., Patterson T.F. Overview of antifungal agents. Clin. Chest. Med. 2009, 30:203-215.
51. Tokunaga M., Tokunaga J.I., Harada K. Scanning and transmission electron microscopy of sterigma and conidiospore formation in Aspergillus group. J. Electron. Microsc. (Tokyo). 1973, 22:27-38.
52. Upton A., Kirby K.A., Carpenter P., Boeckh M., Marr K.A. Invasive aspergillosis following hematopoietic cell transplantation: outcomes and prognostic factors associated with mortality. Clin. Infect. Dis. 2007, 44:531-540.
53. Vaidyanathan S., Winder C.L., Wade S.C., Kell D.B., Goodacre R. Sample preparation in matrix-assisted laser desorption ionization mass spectrometry of whole bacterial cells and the detection of high mass (>20 kDa) proteins. Rapid Commun. Mass. Spectrom 2002, 16:1276-1286.