Auxin-Oxylipin Crosstalk: Relationship of Antagonists

Journal of Integrative Plant Biology

Volumn 53, Issue 6, 2011, Pages 429-445

  Hoffmann, Maik ^a,b   Hentrich, Mathias ^b   Pollmann, Stephan ^a  

^a ETSI MontesTechnical University of Madrid   (Spain)

^b RUHR UNIVERSITY BOCHUM   (Germany)

Author keywords

Auxin; Biosynthesis; Crosstalk; Hormone; Jasmonic acid

Indexed keywords

INDOLEACETIC ACID DERIVATIVE; OXYLIPIN;

ANTAGONISM; BIOLOGICAL DEVELOPMENT; BIOLOGY; HORMONE; LIFE CYCLE; ORGANIC ACID; PHYSIOLOGICAL RESPONSE; PLANT;

BIOLOGICAL MODEL; DRUG ANTAGONISM; HOMEOSTASIS; METABOLISM; REVIEW; SIGNAL TRANSDUCTION; TRANSPORT AT THE CELLULAR LEVEL;

BIOLOGICAL TRANSPORT; HOMEOSTASIS; INDOLEACETIC ACIDS; MODELS, BIOLOGICAL; OXYLIPINS; SIGNAL TRANSDUCTION;

EID: 79958703112     PISSN: 16729072     EISSN: 17447909     Source Type: Journal    
DOI: 10.1111/j.1744-7909.2011.01053.x     Document Type: Review

References (144)

1. Achard P, Cheng H, De Grauwe L, Decat J, Schoutteten H, Moritz T, Van Der Straeten D, Peng J, Harberd NP (2006) Integration of plant responses to environmentally activated phytohormonal signals. Science 311, 91-94.
2. Argueso CT, Raines T, Kieber JJ (2010) Cytokinin signaling and transcriptional networks. Curr. Opin. Plant Biol. 13, 533-539.
3. Arteca RN, Arteca JM (2008) Effects of brassinosteroid, auxin, and cytokinin on ethylene production in Arabidopsis thaliana plants. J. Exp. Bot. 59, 3019-3026.
4. Bajguz A (2007) Metabolism of brassinosteroids in plants. Plant Physiol. Biochem. 45, 95-107.
5. Bartel B, Fink GR (1995) ILR1, an amidohydrolase that releases active indole-3-acetic acid from conjugates. Science 268, 1745-1748.
6. Bayer EM, Smith RS, Mandel T, Nakayama N, Sauer M, Prusinkiewicz P, Kuhlemeier C (2009) Integration of transport-based models for phyllotaxis and midvein formation. Genes Dev. 23, 373-384.
7. Bennett M, Bellini C, Van Der Straeten D (2005) Integrative biology: Dissecting cross-talk between plant signalling pathways. Physiol. Plant. 123, 109-109.
8. Bishopp A, Benkova E, Helariutta Y (2011) Sending mixed messages: Auxin-cytokinin crosstalk in roots. Curr. Opin. Plant Biol. 14, 10-16.
9. Blechert S, Bockelmann C, Füßlein M, v. Schrader T, Stelmach B, Niesel U, Weiler EW (1999) Structure-activity analyses reveal the existence of two separate groups of active octadecanoids in elicitation of the tendril-coiling response of Bryonia dioica Jacq. Planta 207, 470-479.
10. Böttcher C, Pollmann S (2009) Plant oxylipins: Plant responses to 12-oxo-phytodienoic acid are governed by its specific structural and functional properties. FEBS J. 276, 4693-4704.
11. Browse J (2005) Jasmonate: An oxylipin signal with many roles in plants. Vitam. Horm. 72, 431-456.
12. Browse J (2009) Jasmonate passes muster: A receptor and targets for the defense hormone. Annu. Rev. Plant Biol. 60, 183-205.
13. Bülow L, Engelmann S, Schindler M, Hehl R (2009) AthaMap, integrating transcriptional and post-transcriptional data. Nucleic Acids Res. 37, D983-986.
14. Calderon-Villalobos LI, Tan X, Zheng N, Estelle M (2010) Auxin perception-structural insights. Cold Spring Harb. Perspect. Biol. 2, a005546.
15. Campanella JJ, Larko D, Smalley J (2003) A molecular phylogenomic analysis of the ILR1-like family of IAA amidohydrolase genes. Comp. Funct. Genomics 4, 584-600.
16. Chandler JW (2009) Auxin as compere in plant hormone crosstalk. Planta 231, 1-12.
17. Cheng H, Song S, Xiao L, Soo HM, Cheng Z, Xie D, Peng J (2009) Gibberellin acts through jasmonate to control the expression of MYB21, MYB24, and MYB57 to promote stamen filament growth in Arabidopsis. PLoS Genet. 5, e1000440.
18. Chico JM, Chini A, Fonseca S, Solano R (2008) JAZ repressors set the rhythm in jasmonate signaling. Curr. Opin. Plant Biol. 11, 486-494.
19. Chini A, Boter M, Solano R (2009) Plant oxylipins: COI1/JAZs/MYC2 as the core jasmonic acid-signalling module. FEBS J. 276, 4682-4692.
20. Chini A, Fonseca S, Fernandez G, Adie B, Chico JM, Lorenzo O, Garcia-Casado G, Lopez-Vidriero I, Lozano FM, Ponce MR, Micol JL, Solano R (2007) The JAZ family of repressors is the missing link in jasmonate signalling. Nature 448, 666-671.
21. Chiwocha SD, Abrams SR, Ambrose SJ, Cutler AJ, Loewen M, Ross AR, Kermode AR (2003) A method for profiling classes of plant hormones and their metabolites using liquid chromatography-electrospray ionization tandem mass spectrometry: An analysis of hormone regulation of thermodormancy of lettuce (Lactuca sativa L.) seeds. Plant J. 35, 405-417.
22. Chung HS, Howe GA (2009) A critical role for the TIFY motif in repression of jasmonate signaling by a stabilized splice variant of the JASMONATE ZIM-domain protein JAZ10 in Arabidopsis. Plant Cell 21, 131-145.
23. Cutler SR, Rodriguez PL, Finkelstein RR, Abrams SR (2010) Abscisic acid: Emergence of a core signaling network. Annu. Rev. Plant Biol. 61, 651-679.
24. Dave A, Hernández ML, He Z, Andriotis VM, Vaistij FE, Larson TR, Graham IA (2011) 12-Oxo-Phytodienoic Acid Accumulation during Seed Development Represses Seed Germination in Arabidopsis. Plant Cell 23, 583-599.
25. Davies PJ (2004) Plant Hormones. Biosynthesis, Signal Transduction, Action! 3rd edn. Kluwer Academic Publishers, Dordrecht, Boston, London
26. Davuluri RV, Sun H, Palaniswamy SK, Matthews N, Molina C, Kurtz M, Grotewold E (2003) AGRIS: Arabidopsis gene regulatory information server, an information resource of Arabidopsis cis-regulatory elements and transcription factors. BMC Bioinfo. 4, 25.
27. De Rybel B, Vassileva V, Parizot B, Demeulenaere M, Grunewald W, Audenaert D, Van Campenhout J, Overvoorde P, Jansen L, Vanneste S, Moller B, Wilson M, Holman T, Van Isterdael G, Brunoud G, Vuylsteke M, Vernoux T, De Veylder L, Inze D, Weijers D, Bennett MJ, Beeckman T (2010) A Novel Aux/IAA28 Signaling Cascade Activates GATA23-Dependent Specification of Lateral Root Founder Cell Identity. Curr. Biol. 20, 1697-1706.
28. De Smet I, Tetsumura T, De Rybel B, Frey NF, Laplaze L, Casimiro I, Swarup R, Naudts M, Vanneste S, Audenaert D, Inzé D, Bennett MJ, Beeckman T. (2007) Auxin-dependent regulation of lateral root positioning in the basal meristem of Arabidopsis. Development 134, 681-690.
29. del Pozo JC, Estelle M (1999) The Arabidopsis cullin AtCUL1 is modified by the ubiquitin-related protein RUB1. Proc. Natl. Acad. Sci. USA 96, 15342-15347.
30. Dharmasiri N, Dharmasiri S, Estelle M (2005) The F-box protein TIR1 is an auxin receptor. Nature 435, 441-445.
31. Dharmasiri N, Dharmasiri S, Weijers D, Karunarathna N, Jürgens G, Estelle M (2007) AXL and AXR1 have redundant functions in RUB conjugation and growth and development in Arabidopsis. Plant J. 52, 114-123.
32. Ditengou FA, Teale WD, Kochersperger P, Flittner KA, Kneuper I, Van Der Graaff E, Nziengui H, Pinosa F, Li X, Nitschke R, Laux T, Palme K (2008) Mechanical induction of lateral root initiation in Arabidopsis thaliana. Proc. Natl. Acad. Sci. USA 105, 18818-18823.
33. Dombrecht B, Xue GP, Sprague SJ, Kirkegaard JA, Ross JJ, Reid JB, Fitt GP, Sewelam N, Schenk PM, Manners JM, Kazan K (2007) MYC2 differentially modulates diverse jasmonate-dependent functions in Arabidopsis. Plant Cell 19, 2225-2245.
34. Dreher K, Callis J (2007) Ubiquitin, hormones and biotic stress in plants. Ann. Bot. 99, 787-822.
35. Durgbanshi A, Arbona V, Pozo O, Miersch O, Sancho JV, Gomez-Cadenas A (2005) Simultaneous determination of multiple phytohormones in plant extracts by liquid chromatography-electrospray tandem mass spectrometry. J. Agric. Food Chem. 53, 8437-8442.
36. Falkenstein E, Groth B, Mithöfer A, Weiler EW (1991) Methyljasmonate and á-linolenic acid are potent inducers of tendril coiling. Planta 185, 316-322.
37. Feng S, Ma L, Wang X, Xie D, Dinesh-Kumar SP, Wei N, Deng XW (2003) The COP9 signalosome interacts physically with SCF COI1 and modulates jasmonate responses. Plant Cell 15, 1083-1094.
38. Feng S, Martinez C, Gusmaroli G, Wang Y, Zhou J, Wang F, Chen L, Yu L, Iglesias-Pedraz JM, Kircher S, Schäfer E, Fu X, Fan LM, Deng XW (2008) Coordinated regulation of Arabidopsis thaliana development by light and gibberellins. Nature 451, 475-479.
39. Fernández-Calvo P, Chini A, Fernandez-Barbero G, Chico JM, Gimenez-Ibanez S, Geerinck J, Eeckhout D, Schweizer F, Godoy M, Franco-Zorrilla JM, Pauwels L, Witters E, Puga MI, Paz-Ares J, Goossens A, Reymond P, De Jaeger G, Solano R (2011) The Arabidopsis bHLH Transcription Factors MYC3 and MYC4 Are Targets of JAZ Repressors and Act Additively with MYC2 in the Activation of Jasmonate Responses. Plant Cell 23, 701-715.
40. Fonseca S, Chini A, Hamberg M, Adie B, Porzel A, Kramell R, Miersch O, Wasternack C, Solano R (2009) (+)-7-iso-Jasmonoyl-L-isoleucine is the endogenous bioactive jasmonate. Nat. Chem. Biol. 5, 344-350.
41. Gagne JM, Downes BP, Shiu SH, Durski AM, Vierstra RD (2002) The F-box subunit of the SCF E3 complex is encoded by a diverse superfamily of genes in Arabidopsis. Proc. Natl. Acad. Sci. USA 99, 11519-11524.
42. Garcia ME, Lynch T, Peeters J, Snowden C, Finkelstein R (2008) A small plant-specific protein family of ABI five binding proteins (AFPs) regulates stress response in germinating Arabidopsis seeds and seedlings. Plant Mol. Biol. 67, 643-658.
43. Godoy M, Franco-Zorrilla JM, Pérez-Pérez J, Oliveros JC, Lorenzo Ó, Solano R (2011) Improved protein-binding microarrays for the identification of DNA-binding specificities of transcription factors. Plant J. ahead of print.
44. Gomez-Roldan V, Fermas S, Brewer PB, Puech-Pagès V, Dun EA, Pillot JP, Letisse F, Matusova R, Danoun S, Portais JC, Bouwmeester H, Bécard G, Beveridge CA, Rameau C, Rochange SF (2008) Strigolactone inhibition of shoot branching. Nature 455, 189-194.
45. Grsic S, Kirchheim B, Pieper K, Fritsch M, Hilgenberg W, Ludwig-Müller J (1999) Induction of auxin biosynthetic enzymes by jasmonic acid and in clubroot diseased Chinese cabbage plants. Physiol. Plant. 105, 521-531.
46. Grunewald W, Vanholme B, Pauwels L, Plovie E, Inze D, Gheysen G, Goossens A (2009) Expression of the Arabidopsis jasmonate signalling repressor JAZ1/TIFY10A is stimulated by auxin. EMBO Rep. 10, 923-928.
47. Guilfoyle TJ, Hagen G (2007) Auxin response factors. Curr. Opin. Plant Biol. 10, 453-460.
48. Gutjahr C, Riemann M, Müller A, Düchting P, Weiler EW, Nick P (2005) Cholodny-Went revisited: A role for jasmonate in gravitropism of rice coleoptiles. Planta 222, 575-585.
49. Hammer GL, Sinclair TR, Chapman SC, van Oosterom E. (2004) On systems thinking, systems biology, and the in silico plant. Plant Physiol. 134, 909-911.
50. Hardtke CS, Ckurshumova W, Vidaurre DP, Singh SA, Stamatiou G, Tiwari SB, Hagen G, Guilfoyle TJ, Berleth T (2004) Overlapping and non-redundant functions of the Arabidopsis auxin response factors MONOPTEROS and NONPHOTOTROPIC HYPOCOTYL 4. Development 131, 1089-1100.
51. Hotton SK, Callis J (2008) Regulation of cullin RING ligases. Annu. Rev. Plant Biol. 59, 467-489.
52. Hou X, Lee LY, Xia K, Yan Y, Yu H (2010) DELLAs modulate jasmonate signaling via competitive binding to JAZs. Dev. Cell 19, 884-894.
53. Irving HR, Dyson G, McConchie R, Parish RW, Gehring CA (1999) Effects of exogenously applied jasmonates on growth and intracellular pH in maize coleoptile segments. J. Plant Growth Regul. 18, 93-100.
54. Ishiguro S, Kawai-Oda A, Ueda J, Nishida I, Okada K (2001) The DEFECTIVE IN ANTHER DEHISCIENCE1 gene encodes a novel phospholipase A1 catalyzing the initial step of jasmonic acid biosynthesis, which synchronizes pollen maturation, anther dehiscence, and flower opening in Arabidopsis. Plant Cell 13, 2191-2209.
55. Ivanchenko MG, Napsucialy-Mendivil S, Dubrovsky JG (2010) Auxin-induced inhibition of lateral root initiation contributes to root system shaping in Arabidopsis thaliana. Plant J. 64, 740-752.
56. Jaillais Y, Chory J (2010) Unraveling the paradoxes of plant hormone signaling integration. Nat. Struct. Mol. Biol. 17, 642-645.
57. Katsir L, Chung HS, Koo AJ, Howe GA (2008) Jasmonate signaling: A conserved mechanism of hormone sensing. Curr. Opin. Plant Biol. 11, 428-435.
58. Kazan K, Manners JM (2008) Jasmonate signaling: Toward an integrated view. Plant Physiol. 146, 1459-1468.
59. Kepinski S, Leyser O (2005) The Arabidopsis F-box protein TIR1 is an auxin receptor. Nature 435, 446-451.
60. Kieffer M, Neve J, Kepinski S (2010) Defining auxin response contexts in plant development. Curr. Opin. Plant Biol. 13, 12-20.
61. Kleine-Vehn J, Ding Z, Jones AR, Tasaka M, Morita MT, Friml J (2010) Gravity-induced PIN transcytosis for polarization of auxin fluxes in gravity-sensing root cells. Proc. Natl. Acad. Sci. USA 107, 22344-22349.
62. Lackman P, González-Guzmán M, Tilleman S, Carqueijeiro I, Pérez Cuéllar A, Moses T, Seo M, Kanno Y, Häkkinen ST, Van Montagu MCE, Thevelein JM, Maaheimo H, Oksman-Caldentey KM, Rodriguez PL, Rischer H, Goossens A (2011) Jasmonate signaling involves the abscisic acid receptor PYL4 to regulate metabolic reprogramming in Arabidopsis and tobacco. Proc. Natl. Acad. Sci. USA 108, 5891-5896.
63. Lau S, Ehrismann JS, Schlereth A, Takada S, Mayer U, Jürgens G (2010) Cell-cell communication in Arabidopsis early embryogenesis. Eur. J. Cell Biol. 89, 225-230.
64. Lehesranta SJ, Lichtenberger R, Helariutta Y (2010) Cell-to-cell communication in vascular morphogenesis. Curr. Opin. Plant Biol. 13, 59-65.
65. Lehmann T, Hoffmann M, Hentrich M, Pollmann S (2010) Indole-3-acetamide-dependent auxin biosynthesis: A widely distributed way of indole-3-acetic acid production? Eur. J. Cell Biol. 89, 895-905.
66. Liu J, Mehdi S, Topping J, Tarkowski P, Lindsey K (2010) Modelling and experimental analysis of hormonal crosstalk in Arabidopsis. Mol. Syst. Biol. 6, 373.
67. Loake G, Grant M (2007) Salicylic acid in plant defence - the players and protagonists. Curr. Opin. Plant Biol. 10, 466-472.
68. Lokerse AS, Weijers D (2009) Auxin enters the matrix-assembly of response machineries for specific outputs. Curr. Opin. Plant Biol. 12, 520-526.
69. Ludwig-Müller J (2011) Auxin conjugates: Their role for plant development and in the evolution of land plants. J. Exp. Bot. 62, 1757-1773.
70. Ma Y, Szostkiewicz I, Korte A, Moes D, Yang Y, Christmann A, Grill E (2009) Regulators of PP2C phosphatase activity function as abscisic acid sensors. Science 324, 1064-1068.
71. McGinnis KM, Thomas SG, Soule JD, Strader LC, Zale JM, Sun TP, Steber CM (2003) The Arabidopsis SLEEPY1 gene encodes a putative F-box subunit of an SCF E3 ubiquitin ligase. Plant Cell 15, 1120-1130.
72. Melcher K, Xu Y, Ng LM, Zhou XE, Soon FF, Chinnusamy V, Suino-Powell KM, Kovach A, Tham FS, Cutler SR, Li J, Yong EL, Zhu JK, Xu HE (2010) Identification and mechanism of ABA receptor antagonism. Nat. Struct. Mol. Biol. 17, 1102-1108.
73. Miyamoto K, Oka M, Ueda J (1997) Update on the possible mode of action of the jasmonates: Focus on the metabolism of cell wall polysaccharides in relation to growth and development. Physiol. Plant. 100, 631-638.
74. Möller B, Weijers D (2009) Auxin control of embryo patterning. Cold Spring Harb. Perspect. Biol. 1, a001545.
75. Moon J, Zhao Y, Dai X, Zhang W, Gray WM, Huq E, Estelle M (2007) A new CULLIN 1 mutant has altered responses to hormones and light in Arabidopsis. Plant Physiol. 143, 684-696.
76. Morandini P, Salamini F (2003) Plant biotechnology and breeding: Allied for years to come. Trends Plant Sci. 8, 70-75.
77. Mosblech A, Thurow C, Gatz C, Feussner I, Heilmann I (2011) Jasmonic acid perception by COI1 involves inositol polyphosphates in Arabidopsis thaliana. Plant J. 65, 949-957.
78. Müller A, Düchting P, Weiler EW (2002) A multiplex GC-MS/MS technique for the sensitive and quantitative single-run analysis of acidic phytohormones and related compounds, and its application to Arabidopsis thaliana. Planta 216, 44-56.
79. Mundy J, Nielsen HB, Brodersen P (2006) Crosstalk. Trends Plant Sci. 11, 63-64.
80. Nagpal P, Ellis CM, Weber H, Ploense SE, Barkawi LS, Guilfoyle TJ, Hagen G, Alonso JM, Cohen JD, Farmer EE, Ecker JR, Reed JW (2005) Auxin response factors ARF6 and ARF8 promote jasmonic acid production and flower maturation. Development 132, 4107-4118.
81. Nakajima M, Shimada A, Takashi Y, Kim YC, Park SH, Ueguchi-Tanaka M, Suzuki H, Katoh E, Iuchi S, Kobayashi M, Maeda T, Matsuoka M, Yamaguchi I (2006) Identification and characterization of Arabidopsis gibberellin receptors. Plant J. 46, 880-889.
82. Nakamura A, Higuchi K, Goda H, Fujiwara MT, Sawa S, Koshiba T, Shimada Y, Yoshida S (2003) Brassinolide induces IAA5, IAA19, and DR5, a synthetic auxin response element in Arabidopsis, implying a cross talk point of brassinosteroid and auxin signaling. Plant Physiol. 133, 1843-1853.
83. Navarro L, Bari R, Achard P, Lison P, Nemri A, Harberd NP, Jones JD (2008) DELLAs control plant immune responses by modulating the balance of jasmonic acid and salicylic acid signaling. Curr. Biol. 18, 650-655.
84. Overvoorde P, Fukaki H, Beeckman T (2010) Auxin control of root development. Cold Spring Harb. Perspect. Biol. 2, a001537.
85. Pandey S, Nelson DC, Assmann SM (2009) Two novel GPCR-type G proteins are abscisic acid receptors in Arabidopsis. Cell 136, 136-148.
86. Park SY, Fung P, Nishimura N, Jensen DR, Fujii H, Zhao Y, Lumba S, Santiago J, Rodrigues A, Chow TF, Alfred SE, Bonetta D, Finkelstein R, Provart NJ, Desveaux D, Rodriguez PL, McCourt P, Zhu JK, Schroeder JI, Volkman BF, Cutler SR (2009) Abscisic acid inhibits type 2C protein phosphatases via the PYR/PYL family of START proteins. Science 324, 1068-1071.
87. Parry G, Calderon-Villalobos LI, Prigge M, Peret B, Dharmasiri S, Itoh H, Lechner E, Gray WM, Bennett M, Estelle M (2009) Complex regulation of the TIR1/AFB family of auxin receptors. Proc. Natl. Acad. Sci. USA 106, 22540-22545.
88. Pauwels L, Barbero GF, Geerinck J, Tilleman S, Grunewald W, Perez AC, Chico JM, Bossche RV, Sewell J, Gil E, Garcia-Casado G, Witters E, Inze D, Long JA, De Jaeger G, Solano R, Goossens A (2010) NINJA connects the co-repressor TOPLESS to jasmonate signalling. Nature 464, 788-791.
89. Peng J (2009) Gibberellin and jasmonate crosstalk during stamen development. J. Integr. Plant Biol. 51, 1064-1070.
90. Peng ZY, Zhou X, Li L, Yu X, Li H, Jiang Z, Cao G, Bai M, Wang X, Jiang C, Lu H, Hou X, Qu L, Wang Z, Zuo J, Fu X, Su Z, Li S, Guo H (2009) Arabidopsis Hormone Database: A comprehensive genetic and phenotypic information database for plant hormone research in Arabidopsis. Nucleic Acids Res. 37, D975-982.
91. Quint M, Ito H, Zhang W, Gray WM (2005) Characterization of a novel temperature-sensitive allele of the CUL1/AXR6 subunit of SCF ubiquitin-ligases. Plant J. 43, 371-383.
92. Remington DL, Vision TJ, Guilfoyle TJ, Reed JW (2004) Contrasting modes of diversification in the Aux/IAA and ARF gene families. Plant Physiol. 135, 1738-1752.
93. Ren C, Han C, Peng W, Huang Y, Peng Z, Xiong X, Zhu Q, Gao B, Xie D (2009) A leaky mutation in DWARF4 reveals an antagonistic role of brassinosteroid in the inhibition of root growth by jasmonate in Arabidopsis. Plant Physiol. 151, 1412-1420.
94. Ren C, Pan J, Peng W, Genschik P, Hobbie L, Hellmann H, Estelle M, Gao B, Peng J, Sun C, Xie D (2005) Point mutations in Arabidopsis Cullin1 reveal its essential role in jasmonate response. Plant J. 42, 514-524.
95. Riemann M, Bouyer D, Hisada A, Müller A, Yatou O, Weiler EW, Takano M, Furuya M, Nick P (2009) Phytochrome A requires jasmonate for photodestruction. Planta 229, 1035-1045.
96. Riemann M, Müller A, Korte A, Furuya M, Weiler EW, Nick P (2003) Impaired induction of the jasmonate pathway in the rice mutant hebiba. Plant Physiol. 133, 1820-1830.
97. Risseeuw EP, Daskalchuk TE, Banks TW, Liu E, Cotelesage J, Hellmann H, Estelle M, Somers DE, Crosby WL (2003) Protein interaction analysis of SCF ubiquitin E3 ligase subunits from Arabidopsis. Plant J. 34, 753-767.
98. Santiago J, Dupeux F, Round A, Antoni R, Park SY, Jamin M, Cutler SR, Rodriguez PL, Marquez JA (2009a) The abscisic acid receptor PYR1 in complex with abscisic acid. Nature 462, 665-668.
99. Santiago J, Rodrigues A, Saez A, Rubio S, Antoni R, Dupeux F, Park SY, Marquez JA, Cutler SR, Rodriguez PL (2009b) Modulation of drought resistance by the abscisic acid receptor PYL5 through inhibition of clade A PP2Cs. Plant J. 60, 575-588.
100. Santner A, Calderon-Villalobos LI, Estelle M (2009) Plant hormones are versatile chemical regulators of plant growth. Nat. Chem. Biol. 5, 301-307.
101. Sasaki A, Itoh H, Gomi K, Ueguchi-Tanaka M, Ishiyama K, Kobayashi M, Jeong DH, An G, Kitano H, Ashikari M, Matsuoka M (2003) Accumulation of phosphorylated repressor for gibberellin signaling in an F-box mutant. Science 299, 1896-1898.
102. Schmelz EA, Engelberth J, Alborn HT, O'Donnell P, Sammons M, Toshima H, Tumlinson JH, 3rd (2003) Simultaneous analysis of phytohormones, phytotoxins, and volatile organic compounds in plants. Proc. Natl. Acad. Sci. USA 100, 10552-10557.
103. Sheard LB, Tan X, Mao H, Withers J, Ben-Nissan G, Hinds TR, Kobayashi Y, Hsu FF, Sharon M, Browse J, He SY, Rizo J, Howe GA, Zheng N (2010) Jasmonate perception by inositol-phosphate-potentiated COI1-JAZ co-receptor. Nature 468, 400-405.
104. Siemens J, Glawischnig E, Ludwig-Müller J (2008) Indole Glucosinolates and Camalexin do not Influence the Development of the Clubroot Disease in Arabidopsis thaliana. J. Phytopathol. 156, 332-337.
105. Sønderby IE, Geu-Flores F, Halkier BA (2010) Biosynthesis of glucosinolates-gene discovery and beyond. Trends Plant Sci. 15, 283-290.
106. Song S, Qi T, Huang H, Ren Q, Wu D, Chang C, Peng W, Liu Y, Peng J, Xie D (2011) The Jasmonate-ZIM Domain Proteins Interact with the R2R3-MYB Transcription Factors MYB21 and MYB24 to Affect Jasmonate-Regulated Stamen Development in Arabidopsis. Plant Cell 23, 1000-1013.
107. Staswick PE (2009) The tryptophan conjugates of jasmonic and indole-3-acetic acids are endogenous auxin inhibitors. Plant Physiol. 150, 1310-1321.
108. Stelmach BA, Muller A, Hennig P, Laudert D, Andert L, Weiler EW (1998) Quantitation of the octadecanoid 12-oxo-phytodienoic acid, a signalling compound in plant mechanotransduction. Phytochemistry 47, 539-546.
109. Stepanova AN, Alonso JM (2009) Ethylene signaling and response: Where different regulatory modules meet. Curr. Opin. Plant Biol. 12, 548-555.
110. Sun J, Chen Q, Qi L, Jiang H, Li S, Xu Y, Liu F, Zhou W, Pan J, Li X, Palme K, Li C (2011) Jasmonate modulates endocytosis and plasma membrane accumulation of the Arabidopsis PIN2 protein. New Phytol. ahead of print.
111. Sun J, Xu Y, Ye S, Jiang H, Chen Q, Liu F, Zhou W, Chen R, Li X, Tietz O, Wu X, Cohen JD, Palme K, Li C (2009) Arabidopsis ASA1 is important for jasmonate-mediated regulation of auxin biosynthesis and transport during lateral root formation. Plant Cell 21, 1495-1511.
112. Swarup R, Parry G, Graham N, Allen T, Bennett M (2002) Auxin cross-talk: Integration of signalling pathways to control plant development. Plant Mol. Biol. 49, 411-426.
113. Szemenyei H, Hannon M, Long JA (2008) TOPLESS mediates auxin-dependent transcriptional repression during Arabidopsis embryogenesis. Science 319, 1384-1386.
114. Takahashi N, Kuroda H, Kuromori T, Hirayama T, Seki M, Shinozaki K, Shimada H, Matsui M (2004) Expression and interaction analysis of Arabidopsis Skp1-related genes. Plant Cell Physiol. 45, 83-91.
115. Taki N, Sasaki-Sekimoto Y, Obayashi T, Kikuta A, Kobayashi K, Ainai T, Yagi K, Sakurai N, Suzuki H, Masuda T, Takamiya K, Shibata D, Kobayashi Y, Ohta H (2005) 12-oxo-phytodienoic acid triggers expression of a distinct set of genes and plays a role in wound-induced gene expression in Arabidopsis. Plant Physiol. 139, 1268-1283.
116. Tan X, Calderon-Villalobos LI, Sharon M, Zheng C, Robinson CV, Estelle M, Zheng N (2007) Mechanism of auxin perception by the TIR1 ubiquitin ligase. Nature 446, 640-645.
117. Tanaka H, Dhonukshe P, Brewer PB, Friml J (2006) Spatiotemporal asymmetric auxin distribution: A means to coordinate plant development. Cell Mol. Life Sci. 63, 2738-2754.
118. Thimann KV (1938) Hormones and the analysis of growth. Plant Physiol. 13, 437-449.
119. COI1 complex during jasmonate signalling. Nature 448, 661-665.
120. Tiryaki I, Staswick PE (2002) An Arabidopsis mutant defective in jasmonate response is allelic to the auxin-signaling mutant axr1. Plant Physiol. 130, 887-894.
121. Tiwari SB, Hagen G, Guilfoyle T (2003) The roles of auxin response factor domains in auxin-responsive transcription. Plant Cell 15, 533-543.
122. Trewavas AJ (1982) Growth substance sensitivity: The limiting factor in plant development. Physiol. Plant. 55, 60-72.
123. Ueda J, Miyamoto K, Aoki M (1994) Jasmonic acid inhibits the IAA-induced elongation of oat coleoptile segments: A possible mechanism involving the metabolism of cell wall polysaccharides. Plant Cell Physiol. 35, 1065-1070.
124. Ueguchi-Tanaka M, Ashikari M, Nakajima M, Itoh H, Katoh E, Kobayashi M, Chow TY, Hsing YI, Kitano H, Yamaguchi I, Matsuoka M (2005) GIBBERELLIN INSENSITIVE DWARF1 encodes a soluble receptor for gibberellin. Nature 437, 693-698.
125. Ueguchi-Tanaka M, Matsuoka M (2010) The perception of gibberellins: Clues from receptor structure. Curr. Opin. Plant Biol. 13, 503-508.
126. Ulmasov T, Liu ZB, Hagen G, Guilfoyle TJ (1995) Composite structure of auxin response elements. Plant Cell 7, 1611-1623.
127. Ulmasov T, Murfett J, Hagen G, Guilfoyle TJ (1997) Aux/IAA proteins repress expression of reporter genes containing natural and highly active synthetic auxin response elements. Plant Cell 9, 1963-1971.
128. Umehara M, Hanada A, Yoshida S, Akiyama K, Arite T, Takeda-Kamiya N, Magome H, Kamiya Y, Shirasu K, Yoneyama K, Kyozuka J, Yamaguchi S (2008) Inhibition of shoot branching by new terpenoid plant hormones. Nature 455, 195-200.
129. Umezawa T, Nakashima K, Miyakawa T, Kuromori T, Tanokura M, Shinozaki K, Yamaguchi-Shinozaki K (2010) Molecular basis of the core regulatory network in ABA responses: Sensing, signaling and transport. Plant Cell Physiol. 51, 1821-1839.
130. Uppalapati SR, Ayoubi P, Weng H, Palmer DA, Mitchell RE, Jones W, Bender CL (2005) The phytotoxin coronatine and methyl jasmonate impact multiple phytohormone pathways in tomato. Plant J. 42, 201-217.
131. Vert G, Nemhauser JL, Geldner N, Hong F, Chory J (2005) Molecular mechanisms of steroid hormone signaling in plants. Annu. Rev. Cell Dev. Biol. 21, 177-201.
132. Vert G, Walcher CL, Chory J, Nemhauser JL (2008) Integration of auxin and brassinosteroid pathways by Auxin Response Factor 2. Proc. Natl. Acad. Sci. USA 105, 9829-9834.
133. Vierstra RD (2009) The ubiquitin-26S proteasome system at the nexus of plant biology. Nat. Rev. Mol. Cell Biol. 10, 385-397.
134. Wasternack C (2007) Jasmonates: An update on biosynthesis, signal transduction and action in plant stress response, growth and development. Ann. Bot. 100, 681-697.
135. Wei N, Deng XW (2003) The COP9 signalosome. Annu. Rev. Cell Dev. Biol. 19, 261-286.
136. Weiler EW, Albrecht T, Groth B, Xia ZQ, Luxem M, Liß H, Andert L, Spengler P (1993) Evidence for the involvement of jasmonates and their octadecanoid precursors in the tendril coiling response of Bryonia dioica. Phytochemistry 32, 591-600.
137. Wolters H, Jürgens G (2009) Survival of the flexible: Hormonal growth control and adaptation in plant development. Nat. Rev. Genet. 10, 305-317.
138. Woodward AW, Bartel B (2005) Auxin: Regulation, action, and interaction. Ann. Bot. 95, 707-735.
139. Yan J, Zhang C, Gu M, Bai Z, Zhang W, Qi T, Cheng Z, Peng W, Luo H, Nan F, Wang Z, Xie D (2009) The Arabidopsis CORONATINE INSENSITIVE1 protein is a jasmonate receptor. Plant Cell 21, 2220-2236.
140. Yang HR, Tang K, Liu HT, Pan QH, Huang WD (2009) Jasmonic acid is induced in a biphasic manner in response of pea seedlings to wounding. J. Integr. Plant Biol. 51, 562-573.
141. Zhang S, Li G, Fang J, Chen W, Jiang H, Zou J, Liu X, Zhao X, Li X, Chu C, Xie Q, Jiang X, Zhu L (2010) The interactions among DWARF10, auxin and cytokinin underlie lateral bud outgrowth in rice. J. Integr. Plant Biol. 52, 626-638.
142. Zhang W, Ito H, Quint M, Huang H, Noel LD, Gray WM (2008) Genetic analysis of CAND1-CUL1 interactions in Arabidopsis supports a role for CAND1-mediated cycling of the SCFTIR1 complex. Proc. Natl. Acad. Sci. USA 105, 8470-8475.
143. Zhang Y, Turner JG (2008) Wound-induced endogenous jasmonates stunt plant growth by inhibiting mitosis. PLoS ONE 3, e3699.
144. Zhao Y (2010) Auxin biosynthesis and its role in plant development. Annu. Rev. Plant Biol. 61, 49-64.