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Volumn 10, Issue 6, 2011, Pages 2734-2743

A comprehensive map of the human urinary proteome

Author keywords

biomarkers; body fluids; glycoproteins

Indexed keywords

BIOLOGICAL MARKER; LECTIN; PLASMA PROTEIN; PROTEOME;

EID: 79958236852     PISSN: 15353893     EISSN: 15353907     Source Type: Journal    
DOI: 10.1021/pr2003038     Document Type: Article
Times cited : (161)

References (57)
  • 3
    • 16344384394 scopus 로고    scopus 로고
    • Renal and urinary proteomics: Current applications and challenges
    • DOI 10.1002/pmic.200401012
    • Thongboonkerd, V.; Malasit, P. Renal and urinary proteomics: current applications and challenges Proteomics 2005, 5 (4) 1033-42 (Pubitemid 40469033)
    • (2005) Proteomics , vol.5 , Issue.4 , pp. 1033-1042
    • Thongboonkerd, V.1    Malasit, P.2
  • 5
    • 33750131662 scopus 로고    scopus 로고
    • Simple urinary sample preparation for proteomic analysis
    • DOI 10.1021/pr060305y
    • Khan, A.; Packer, N. H. Simple urinary sample preparation for proteomic analysis J. Proteome Res. 2006, 5 (10) 2824-38 (Pubitemid 44595183)
    • (2006) Journal of Proteome Research , vol.5 , Issue.10 , pp. 2824-2838
    • Khan, A.1    Packer, N.H.2
  • 6
    • 0018606770 scopus 로고
    • Proteins in human urine. I. Concentration and analysis by two-dimensional electrophoresis
    • Anderson, N. G.; Anderson, N. L.; Tollaksen, S. L. Proteins of human urine. I. Concentration and analysis by two-dimensional electrophoresis Clin. Chem. 1979, 25 (7) 1199-210 (Pubitemid 9253225)
    • (1979) Clinical Chemistry , vol.25 , Issue.7 , pp. 1199-1210
    • Anderson, N.G.1    Anderson, N.L.2    Tollaksen, S.L.3
  • 7
    • 11144356366 scopus 로고    scopus 로고
    • Characterization of the human urinary proteome: A method for high-resolution display of urinary proteins on two-dimensional electrophoresis gels with a yield of nearly 1400 distinct protein spots
    • DOI 10.1002/pmic.200300661
    • Pieper, R.; Gatlin, C. L.; McGrath, A. M.; Makusky, A. J.; Mondal, M.; Seonarain, M.; Field, E.; Schatz, C. R.; Estock, M. A.; Ahmed, N.; Anderson, N. G.; Steiner, S. Characterization of the human urinary proteome: a method for high-resolution display of urinary proteins on two-dimensional electrophoresis gels with a yield of nearly 1400 distinct protein spots Proteomics 2004, 4 (4) 1159-74 (Pubitemid 38445973)
    • (2004) Proteomics , vol.4 , Issue.4 , pp. 1159-1174
    • Pieper, R.1    Gatlin, C.L.2    McGrath, A.M.3    Makusky, A.J.4    Mondal, M.5    Seonarain, M.6    Field, E.7    Schatz, C.R.8    Estock, M.A.9    Ahmed, N.10    Anderson, N.G.11    Steiner, S.12
  • 8
    • 70349897855 scopus 로고    scopus 로고
    • High speed two-dimensional protein separation without gel by isoelectric focusing-asymmetrical flow field flow fractionation: Application to urinary proteome
    • Kim, K. H.; Moon, M. H. High speed two-dimensional protein separation without gel by isoelectric focusing-asymmetrical flow field flow fractionation: application to urinary proteome J. Proteome Res. 2009, 8 (9) 4272-8
    • (2009) J. Proteome Res. , vol.8 , Issue.9 , pp. 4272-8
    • Kim, K.H.1    Moon, M.H.2
  • 9
    • 20644444360 scopus 로고    scopus 로고
    • Development of a high-throughput method for preparing human urine for two-dimensional electrophoresis
    • DOI 10.1002/pmic.200401267
    • Smith, G.; Barratt, D.; Rowlinson, R.; Nickson, J.; Tonge, R. Development of a high-throughput method for preparing human urine for two-dimensional electrophoresis Proteomics 2005, 5 (9) 2315-8 (Pubitemid 40835399)
    • (2005) Proteomics , vol.5 , Issue.9 , pp. 2315-2318
    • Smith, G.1    Barratt, D.2    Rowlinson, R.3    Nickson, J.4    Tonge, R.5
  • 11
    • 29544433936 scopus 로고    scopus 로고
    • Human urine proteome analysis by three separation approaches
    • DOI 10.1002/pmic.200401334
    • Sun, W.; Li, F.; Wu, S.; Wang, X.; Zheng, D.; Wang, J.; Gao, Y. Human urine proteome analysis by three separation approaches Proteomics 2005, 5 (18) 4994-5001 (Pubitemid 43016918)
    • (2005) Proteomics , vol.5 , Issue.18 , pp. 4994-5001
    • Sun, W.1    Li, F.2    Wu, S.3    Wang, X.4    Zheng, D.5    Wang, J.6    Gao, Y.H.7
  • 15
    • 33750364830 scopus 로고    scopus 로고
    • The human urinary proteome contains more than 1500 proteins, including a large proportion of membrane proteins
    • Adachi, J.; Kumar, C.; Zhang, Y.; Olsen, J. V.; Mann, M. The human urinary proteome contains more than 1500 proteins, including a large proportion of membrane proteins Genome Biol. 2006, 7 (9) R80
    • (2006) Genome Biol. , vol.7 , Issue.9 , pp. 80
    • Adachi, J.1    Kumar, C.2    Zhang, Y.3    Olsen, J.V.4    Mann, M.5
  • 16
    • 77649262905 scopus 로고    scopus 로고
    • A comprehensive and non-prefractionation on the protein level approach for the human urinary proteome: Touching phosphorylation in urine
    • Li, Q. R.; Fan, K. X.; Li, R. X.; Dai, J.; Wu, C. C.; Zhao, S. L.; Wu, J. R.; Shieh, C. H.; Zeng, R. A comprehensive and non-prefractionation on the protein level approach for the human urinary proteome: touching phosphorylation in urine Rapid Commun. Mass Spectrom. 2010, 24 (6) 823-32
    • (2010) Rapid Commun. Mass Spectrom. , vol.24 , Issue.6 , pp. 823-32
    • Li, Q.R.1    Fan, K.X.2    Li, R.X.3    Dai, J.4    Wu, C.C.5    Zhao, S.L.6    Wu, J.R.7    Shieh, C.H.8    Zeng, R.9
  • 17
    • 47549119495 scopus 로고    scopus 로고
    • Urinary proteomics: Towards biomarker discovery, diagnostics and prognostics
    • DOI 10.1039/b802534g
    • Thongboonkerd, V. Urinary proteomics: towards biomarker discovery, diagnostics and prognostics Mol. Biosyst. 2008, 4 (8) 810-5 (Pubitemid 352009217)
    • (2008) Molecular BioSystems , vol.4 , Issue.8 , pp. 810-815
    • Thongboonkerd, V.1
  • 19
    • 22044440445 scopus 로고    scopus 로고
    • Two-dimensional fluorescence difference gel electrophoresis analysis of the urine proteome in human diabetic nephropathy
    • DOI 10.1002/pmic.200401288
    • Sharma, K.; Lee, S.; Han, S.; Lee, S.; Francos, B.; McCue, P.; Wassell, R.; Shaw, M. A.; RamachandraRao, S. P. Two-dimensional fluorescence difference gel electrophoresis analysis of the urine proteome in human diabetic nephropathy Proteomics 2005, 5 (10) 2648-55 (Pubitemid 40966492)
    • (2005) Proteomics , vol.5 , Issue.10 , pp. 2648-2655
    • Sharma, K.1    Lee, S.2    Han, S.3    Lee, S.4    Francos, B.5    McCue, P.6    Wassell, R.7    Shaw, M.A.8    RamachandraRao, S.P.9
  • 20
    • 61449318282 scopus 로고    scopus 로고
    • Protein profiling of post-prostatic massage urine specimens by surface-enhanced laser desorption/ionization time-of-flight mass spectrometry to discriminate between prostate cancer and benign lesions
    • Okamoto, A.; Yamamoto, H.; Imai, A.; Hatakeyama, S.; Iwabuchi, I.; Yoneyama, T.; Hashimoto, Y.; Koie, T.; Kamimura, N.; Mori, K.; Yamaya, K.; Ohyama, C. Protein profiling of post-prostatic massage urine specimens by surface-enhanced laser desorption/ionization time-of-flight mass spectrometry to discriminate between prostate cancer and benign lesions Oncol. Rep. 2009, 21 (1) 73-9
    • (2009) Oncol. Rep. , vol.21 , Issue.1 , pp. 73-9
    • Okamoto, A.1    Yamamoto, H.2    Imai, A.3    Hatakeyama, S.4    Iwabuchi, I.5    Yoneyama, T.6    Hashimoto, Y.7    Koie, T.8    Kamimura, N.9    Mori, K.10    Yamaya, K.11    Ohyama, C.12
  • 21
    • 54849422411 scopus 로고    scopus 로고
    • Evaluation of urine tumor-associated trypsin inhibitor, CYFRA 21-1, and urinary bladder cancer antigen for detection of high-grade bladder carcinoma
    • Gkialas, I.; Papadopoulos, G.; Iordanidou, L.; Stathouros, G.; Tzavara, C.; Gregorakis, A.; Lykourinas, M. Evaluation of urine tumor-associated trypsin inhibitor, CYFRA 21-1, and urinary bladder cancer antigen for detection of high-grade bladder carcinoma Urology 2008, 72 (5) 1159-63
    • (2008) Urology , vol.72 , Issue.5 , pp. 1159-63
    • Gkialas, I.1    Papadopoulos, G.2    Iordanidou, L.3    Stathouros, G.4    Tzavara, C.5    Gregorakis, A.6    Lykourinas, M.7
  • 23
    • 79955436583 scopus 로고    scopus 로고
    • Quantitative analysis of the intra- and inter-individual variability of the normal urinary proteome
    • Nagaraj, N.; Mann, M. Quantitative analysis of the intra- and inter-individual variability of the normal urinary proteome J. Proteome Res. 2011, 10 (2) 637-45
    • (2011) J. Proteome Res. , vol.10 , Issue.2 , pp. 637-45
    • Nagaraj, N.1    Mann, M.2
  • 24
    • 40649095957 scopus 로고    scopus 로고
    • Quantitative proteomics using stable isotope labeling with amino acids in cell culture
    • DOI 10.1038/nprot.2008.2, PII NPROT.2008.2
    • Harsha, H. C.; Molina, H.; Pandey, A. Quantitative proteomics using stable isotope labeling with amino acids in cell culture Nat. Protoc. 2008, 3 (3) 505-16 (Pubitemid 351372235)
    • (2008) Nature Protocols , vol.3 , Issue.3 , pp. 505-516
    • Harsha, H.C.1    Molina, H.2    Pandey, A.3
  • 32
    • 65349133591 scopus 로고    scopus 로고
    • An attempt to understand kidney's protein handling function by comparing plasma and urine proteomes
    • Jia, L.; Zhang, L.; Shao, C.; Song, E.; Sun, W.; Li, M.; Gao, Y. An attempt to understand kidney's protein handling function by comparing plasma and urine proteomes PLoS One 2009, 4 (4) e5146
    • (2009) PLoS One , vol.4 , Issue.4 , pp. 5146
    • Jia, L.1    Zhang, L.2    Shao, C.3    Song, E.4    Sun, W.5    Li, M.6    Gao, Y.7
  • 33
    • 33747646924 scopus 로고    scopus 로고
    • An overview of the potassium channel family
    • Miller, C. An overview of the potassium channel family Genome Biol. 2000, 1 (4) REVIEWS0004
    • (2000) Genome Biol. , vol.1 , Issue.4 , pp. 0004
    • Miller, C.1
  • 36
    • 33745997036 scopus 로고    scopus 로고
    • Differential actin-dependent localization modulates the evolutionarily conserved activity of Shroom family proteins
    • DOI 10.1074/jbc.M512463200
    • Dietz, M. L.; Bernaciak, T. M.; Vendetti, F.; Kielec, J. M.; Hildebrand, J. D. Differential actin-dependent localization modulates the evolutionarily conserved activity of Shroom family proteins J. Biol. Chem. 2006, 281 (29) 20542-54 (Pubitemid 44065826)
    • (2006) Journal of Biological Chemistry , vol.281 , Issue.29 , pp. 20542-20554
    • Dietz, M.L.1    Bernaciak, T.M.2    Vendetti, F.3    Kielec, J.M.4    Hildebrand, J.D.5
  • 37
    • 0028907718 scopus 로고
    • Cloning of a human homologue of the Xenopus laevis APX gene from the ocular albinism type 1 critical region
    • Schiaffino, M. V.; Bassi, M. T.; Rugarli, E. I.; Renieri, A.; Galli, L.; Ballabio, A. Cloning of a human homologue of the Xenopus laevis APX gene from the ocular albinism type 1 critical region Hum. Mol. Genet. 1995, 4 (3) 373-82
    • (1995) Hum. Mol. Genet. , vol.4 , Issue.3 , pp. 373-82
    • Schiaffino, M.V.1    Bassi, M.T.2    Rugarli, E.I.3    Renieri, A.4    Galli, L.5    Ballabio, A.6
  • 39
    • 66349121402 scopus 로고    scopus 로고
    • Structural and functional analysis of fatty acid-binding proteins
    • Storch, J.; McDermott, L. Structural and functional analysis of fatty acid-binding proteins J. Lipid Res. 2009, 50 (Suppl) S126-31
    • (2009) J. Lipid Res. , vol.50 , Issue.SUPPL. , pp. 126-31
    • Storch, J.1    McDermott, L.2
  • 42
    • 67650945240 scopus 로고    scopus 로고
    • A pilot study of proteomic profiles of human hepatocellular carcinoma in the United States
    • Matos, J. M.; Witzmann, F. A.; Cummings, O. W.; Schmidt, C. M. A pilot study of proteomic profiles of human hepatocellular carcinoma in the United States J. Surg. Res. 2009, 155 (2) 237-43
    • (2009) J. Surg. Res. , vol.155 , Issue.2 , pp. 237-43
    • Matos, J.M.1    Witzmann, F.A.2    Cummings, O.W.3    Schmidt, C.M.4
  • 44
    • 73649114942 scopus 로고    scopus 로고
    • Profiling protein markers associated with lymph node metastasis in prostate cancer by DIGE-based proteomics analysis
    • Pang, J.; Liu, W. P.; Liu, X. P.; Li, L. Y.; Fang, Y. Q.; Sun, Q. P.; Liu, S. J.; Li, M. T.; Su, Z. L.; Gao, X. Profiling protein markers associated with lymph node metastasis in prostate cancer by DIGE-based proteomics analysis J. Proteome Res. 2010, 9 (1) 216-26
    • (2010) J. Proteome Res. , vol.9 , Issue.1 , pp. 216-26
    • Pang, J.1    Liu, W.P.2    Liu, X.P.3    Li, L.Y.4    Fang, Y.Q.5    Sun, Q.P.6    Liu, S.J.7    Li, M.T.8    Su, Z.L.9    Gao, X.10
  • 45
    • 0035959880 scopus 로고    scopus 로고
    • Overexpression of candidate tumor suppressor gene FUS1 isolated from the 3p21.3 homozygous deletion region leads to G1 arrest and growth inhibition of lung cancer cells
    • DOI 10.1038/sj.onc.1204832
    • Kondo, M.; Ji, L.; Kamibayashi, C.; Tomizawa, Y.; Randle, D.; Sekido, Y.; Yokota, J.; Kashuba, V.; Zabarovsky, E.; Kuzmin, I.; Lerman, M.; Roth, J.; Minna, J. D. Overexpression of candidate tumor suppressor gene FUS1 isolated from the 3p21.3 homozygous deletion region leads to G1 arrest and growth inhibition of lung cancer cells Oncogene 2001, 20 (43) 6258-62 (Pubitemid 32964440)
    • (2001) Oncogene , vol.20 , Issue.43 , pp. 6258-6262
    • Kondo, M.1    Ji, L.2    Kamibayashi, C.3    Tomizawa, Y.4    Randle, D.5    Sekido, Y.6    Yokota, J.7    Kashuba, V.8    Zabarovsky, E.9    Kuzmin, I.10    Lerman, M.11    Roth, J.12    Minna, J.D.13
  • 46
    • 77957244402 scopus 로고    scopus 로고
    • Ephrins and Eph receptors in stem cells and cancer
    • Genander, M.; Frisen, J., Ephrins and Eph receptors in stem cells and cancer. Curr. Opin. Cell Biol. 2010, 22 (5), 611-6.
    • (2010) Curr. Opin. Cell Biol. , vol.22 , Issue.5 , pp. 611-6
    • Genander, M.1    Frisen, J.2
  • 49
    • 0242361321 scopus 로고    scopus 로고
    • PDGFRB is overexpressed in metastatic medulloblastoma
    • DOI 10.1038/ng1103-197
    • Gilbertson, R. J.; Clifford, S. C. PDGFRB is overexpressed in metastatic medulloblastoma Nat. Genet. 2003, 35 (3) 197-8 (Pubitemid 37363165)
    • (2003) Nature Genetics , vol.35 , Issue.3 , pp. 197-198
    • Gilbertson, R.J.1    Clifford, S.C.2
  • 51
    • 59149084542 scopus 로고    scopus 로고
    • Targeted proteomic strategy for clinical biomarker discovery
    • Schiess, R.; Wollscheid, B.; Aebersold, R. Targeted proteomic strategy for clinical biomarker discovery Mol. Oncol. 2009, 3 (1) 33-44
    • (2009) Mol. Oncol. , vol.3 , Issue.1 , pp. 33-44
    • Schiess, R.1    Wollscheid, B.2    Aebersold, R.3
  • 52
    • 70349932824 scopus 로고    scopus 로고
    • Quantitative analysis of an aberrant glycoform of TIMP1 from colon cancer serum by L-PHA-enrichment and SISCAPA with MRM mass spectrometry
    • Ahn, Y. H.; Lee, J. Y.; Lee, J. Y.; Kim, Y. S.; Ko, J. H.; Yoo, J. S. Quantitative analysis of an aberrant glycoform of TIMP1 from colon cancer serum by L-PHA-enrichment and SISCAPA with MRM mass spectrometry J. Proteome Res. 2009, 8 (9) 4216-24
    • (2009) J. Proteome Res. , vol.8 , Issue.9 , pp. 4216-24
    • Ahn, Y.H.1    Lee, J.Y.2    Lee, J.Y.3    Kim, Y.S.4    Ko, J.H.5    Yoo, J.S.6
  • 55
    • 76849093311 scopus 로고    scopus 로고
    • Preservation of cortical sortilin protein levels in MCI and Alzheimer's disease
    • Mufson, E. J.; Wuu, J.; Counts, S. E.; Nykjaer, A. Preservation of cortical sortilin protein levels in MCI and Alzheimer's disease Neurosci. Lett. 2011, 471 (3) 129-33
    • (2011) Neurosci. Lett. , vol.471 , Issue.3 , pp. 129-33
    • Mufson, E.J.1    Wuu, J.2    Counts, S.E.3    Nykjaer, A.4


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