메뉴 건너뛰기




Volumn 74, Issue 6, 2011, Pages 939-948

Design and validation of a novel multiplex real-time PCR assay for vibrio pathogen detection

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; FOOD CONTAMINATION; HUMAN; ISOLATION AND PURIFICATION; METHODOLOGY; MICROBIOLOGY; POLYMERASE CHAIN REACTION; PRODUCT SAFETY; REPRODUCIBILITY; SEA FOOD; SENSITIVITY AND SPECIFICITY; SPECIES DIFFERENCE; STANDARD; VALIDATION STUDY; VIBRIO; VIBRIO CHOLERAE; VIBRIO PARAHAEMOLYTICUS; VIBRIO VULNIFICUS;

EID: 79958156402     PISSN: 0362028X     EISSN: None     Source Type: Journal    
DOI: 10.4315/0362-028X.JFP-10-511     Document Type: Article
Times cited : (12)

References (34)
  • 1
    • 20444387553 scopus 로고    scopus 로고
    • Molecular phylogeny of the genus Pseudomonas based on rpoB sequences and application for the identification of isolates
    • DOI 10.1016/j.resmic.2005.02.009, PII S0923250805000574
    • Ait Tayeb, L., E. Ageron, F. Grimont, and P. A. D. Grimont. 2005. Molecular phylogeny of the genus Pseudomonas based on rpoB sequences and application for the identification of isolates. Res. Microbiol. 156:763-773. (Pubitemid 40798518)
    • (2005) Research in Microbiology , vol.156 , Issue.5-6 , pp. 763-773
    • Ait Tayeb, L.1    Ageron, E.2    Grimont, F.3    Grimont, P.A.D.4
  • 2
    • 27144530664 scopus 로고    scopus 로고
    • Generation of subspecies level-specific microbial diagnostic microarrays using genes amplified from subtractive suppression hybridization as microarray probes
    • Bae, J.-W., S.-K. Rhee, Y.-D. Nam, and Y.-H. Park. 2005. Generation of subspecies level-specific microbial diagnostic microarrays using genes amplified from subtractive suppression hybridization as microarray probes. Nucleic Acids Res. 33:e113.
    • (2005) Nucleic Acids Res. , vol.33
    • Bae, J.-W.1    Rhee, S.-K.2    Nam, Y.-D.3    Park, Y.-H.4
  • 3
    • 2942527326 scopus 로고    scopus 로고
    • Oligonucleotide microarrays in microbial diagnostics
    • DOI 10.1016/j.mib.2004.04.005, PII S1369527404000438
    • Bodrossy, L., and A. Sessitsch. 2004. Oligonucleotide microarrays in microbial diagnostics. Curr. Opin. Microbiol. 7:245-254. (Pubitemid 38758065)
    • (2004) Current Opinion in Microbiology , vol.7 , Issue.3 , pp. 245-254
    • Bodrossy, L.1    Sessitsch, A.2
  • 5
    • 78649470832 scopus 로고    scopus 로고
    • Update: Cholera outbreak-Haiti, 2010
    • Centers for Disease Control and Prevention
    • Centers for Disease Control and Prevention. 2010. Update: cholera outbreak-Haiti, 2010. Morb. Mortal. Wkly. Rep. 59:1473-1479.
    • (2010) Morb. Mortal. Wkly. Rep. , Issue.59 , pp. 1473-1479
  • 6
    • 16544378581 scopus 로고    scopus 로고
    • + Strains of Vibrio cholerae Isolated from Seafood in Malaysia
    • DOI 10.1128/AEM.70.4.1964-1972.2004
    • Chen, C.-H., T. Shimada, N. Elhadi, S. Radu, and M. Nishibuchi. 2004. Phenotypic and genotypic characteristics and epidemiological significance of ctxz strains of Vibrio cholerae isolated from seafood in Malaysia. Appl. Environ. Microbiol. 70:1964-1972. (Pubitemid 38500493)
    • (2004) Applied and Environmental Microbiology , vol.70 , Issue.4 , pp. 1964-1972
    • Chen, C.-H.1    Shimada, T.2    Elhadi, N.3    Radu, S.4    Nishibuchi, M.5
  • 7
    • 0038819962 scopus 로고    scopus 로고
    • Environmental application of array technology: Promise, problems and practicalities
    • DOI 10.1016/S0958-1669(03)00057-0
    • Cook, K. L., and G. S. Saylery. 2003. Environmental application of array technology: promise, problems and practicalities Curr. Opin. Biotechnol. 14:311-318. (Pubitemid 36782661)
    • (2003) Current Opinion in Biotechnology , vol.14 , Issue.3 , pp. 311-318
    • Cook, K.L.1    Sayler, G.S.2
  • 8
    • 84985280214 scopus 로고
    • Vibrio cholerae in marine foods and environmental waters: A literature review
    • DePaola, A. 1981. Vibrio cholerae in marine foods and environmental waters: A literature review. J. Food Sci. 46:66-70.
    • (1981) J. Food Sci. , vol.46 , pp. 66-70
    • Depaola, A.1
  • 9
    • 43749097705 scopus 로고    scopus 로고
    • Emerging pathogens: Challenges and successes of molecular diagnostics
    • DOI 10.2353/jmoldx.2008.070063
    • Dong, J., J. P. Olano, J. W. McBride, and D. H. Walker. 2008. Emerging pathogens: challenges and successes of molecular diagnostics. J. Mol. Diagn. 10:185-197. (Pubitemid 351692160)
    • (2008) Journal of Molecular Diagnostics , vol.10 , Issue.3 , pp. 185-197
    • Dong, J.1    Olano, J.P.2    McBride, J.W.3    Walker, D.H.4
  • 10
    • 0037081031 scopus 로고    scopus 로고
    • Discriminative quantification of cytochrome P4502D6 and 2D7/8 pseudogene expression by TaqMan real-time reverse transcriptase polymerase chain reaction
    • DOI 10.1006/abio.2001.5453
    • Endrizzi, K., J. Fischer, K. Klein, M. Schwab, A. Nussler Neuhaus, M. Eichelbaum, and U. M. Zanger. 2002. Discriminative quantification of cytochrome P4502D6 and 2D7/8 pseudogene expression by TaqMan real-time reverse transcriptase polymerase chain reaction. Anal. Biochem. 300:121-131. (Pubitemid 34093686)
    • (2002) Analytical Biochemistry , vol.300 , Issue.2 , pp. 121-131
    • Endrizzi, K.1    Fischer, J.2    Klein, K.3    Schwab, M.4    Nussler, A.5    Neuhaus, P.6    Eichelbaum, M.7    Zanger, U.M.8
  • 12
    • 9044222878 scopus 로고    scopus 로고
    • HSP60 gene sequences as universal targets for microbial species identification: Studies with coagulase-negative staphylococci
    • Goh, S. H., S. Potter, J. O. Wood, S. M. Hemmingsen, R. P. Reynolds, and A. W. Chow. 1996. HSP60 gene sequences as universal targets for microbial species identification: studies with coagulase-negative staphylococci. J. Clin. Microbiol. 34:818-823. (Pubitemid 26091489)
    • (1996) Journal of Clinical Microbiology , vol.34 , Issue.4 , pp. 818-823
    • Gob, S.H.1    Potter, S.2    Wood, J.O.3    Hemmingsen, S.M.4    Reynolds, R.P.5    Chow, A.W.6
  • 13
    • 33646009187 scopus 로고    scopus 로고
    • Multiplex real-time PCR detection of Vibrio cholerae
    • Gubala, A. J. Multiplex real-time PCR detection of Vibrio cholerae. J. Microbiol. Methods 65:278-293.
    • J. Microbiol. Methods , vol.65 , pp. 278-293
    • Gubala, A.J.1
  • 14
    • 33748800226 scopus 로고    scopus 로고
    • Molecular-beacon multiplex real-time PCR assay for detection of Vibrio cholerae
    • DOI 10.1128/AEM.02597-05
    • Gubala, A. J., and D. F. Proll. 2006. Molecular-beacon multiplex real-time PCR assay for detection of Vibrio cholerae. Appl. Environ. Microbiol. 72:6424-6428. (Pubitemid 44414684)
    • (2006) Applied and Environmental Microbiology , vol.72 , Issue.9 , pp. 6424-6428
    • Gubala, A.J.1    Proll, D.F.2
  • 15
    • 70350475889 scopus 로고    scopus 로고
    • Multiplexed bead-based mesofluidic system for detection of food-borne pathogenic bacteria
    • Jin, S.-Q., B.-C. Yin, and B.-C. Ye. 2009. Multiplexed bead-based mesofluidic system for detection of food-borne pathogenic bacteria. Appl. Environ. Microbiol. 75:6647-6654.
    • (2009) Appl. Environ. Microbiol. , vol.75 , pp. 6647-6654
    • Jin, S.-Q.1    Yin, B.-C.2    Ye, B.-C.3
  • 16
    • 17044364421 scopus 로고    scopus 로고
    • Comparison between rpoB and 16S rRNA gene sequencing for molecular identification of 168 clinical isolates of Corynebacterium
    • Khamis, A., D. Raoult, and B. La Scola. 2005. Comparison between rpoB and 16S rRNA gene sequencing for molecular identification of 168 clinical isolates of Corynebacterium. J. Clin. Microbiol. 43:1934-1936.
    • (2005) J. Clin. Microbiol. , vol.43 , pp. 1934-1936
    • Khamis, A.1    Raoult, D.2    La Scola, B.3
  • 17
    • 84863754572 scopus 로고    scopus 로고
    • Enzymatic amplification of DNA by PCR: Standard procedures and optimization
    • Accessed 28 March 2011
    • Kramer, M. F., and D. M. Coen. 2000. Enzymatic amplification of DNA by PCR: standard procedures and optimization. Current protocols in toxicology 3:A.3C.1-A.3C.14. http://onlinelibrary.wiley.com/doi/10.1002/0471140856. txa03cs03/full. Accessed 28 March 2011.
    • (2000) Current Protocols in Toxicology 3:A.3C.1-A.3C.14.
    • Kramer, M.F.1    Coen, D.M.2
  • 19
    • 0001793482 scopus 로고
    • P. R. Murray, E. J. Baron, M. A. Pfaller, J. H. Jorgensen, and R. H. Yolken (ed.), Manual of clinical microbiology, 6th ed. ASM Press, Washington, DC
    • McLaughlin, J. C. 1995. Vibrio 465-476. In P. R. Murray, E. J. Baron, M. A. Pfaller, J. H. Jorgensen, and R. H. Yolken (ed.), Manual of clinical microbiology, 6th ed. ASM Press, Washington, DC.
    • (1995) Vibrio , pp. 465-476
    • McLaughlin, J.C.1
  • 22
    • 0030669211 scopus 로고    scopus 로고
    • RpoB sequence analysis as a novel basis for bacterial identification
    • Mollet, C., M. Drancourt, and D. Raoult. 1997. rpoB sequence analysis as a novel basis for bacterial identification. Mol. Microbiol. 26:1005-1011. (Pubitemid 27507884)
    • (1997) Molecular Microbiology , vol.26 , Issue.5 , pp. 1005-1011
    • Mollet, C.1    Drancourt, M.2    Raoult, D.3
  • 23
  • 24
    • 0033783047 scopus 로고    scopus 로고
    • A review of pathogenic Vibrio infections for clinicians
    • Nicholas, A. D., and A. Shafaie. 2000. A review of pathogenic Vibrio infections for clinicians. Infect. Med. 17:665-685.
    • (2000) Infect. Med. , vol.17 , pp. 665-685
    • Nicholas, A.D.1    Shafaie, A.2
  • 25
    • 10444283517 scopus 로고    scopus 로고
    • Detection of pathogenic Vibrio spp. in shellfish by using multiplex PCR and DNA microarrays
    • DOI 10.1128/AEM.70.12.7436-7444.2004
    • Panicker, G., D. R. Call, M. J. Krug, and A. K. Bej. 2004. Detection of pathogenic Vibrio spp. in shellfish by using multiplex PCR and DNA microarrays. Appl. Environ. Microbiol. 70:7436-7444. (Pubitemid 39643810)
    • (2004) Applied and Environmental Microbiology , vol.70 , Issue.12 , pp. 7436-7444
    • Panicker, G.1    Call, D.R.2    Krug, M.J.3    Bej, A.K.4
  • 27
    • 79958174313 scopus 로고    scopus 로고
    • Focus on innovation: Something old, something new: Innovation within existing food testing technologies
    • Philpott, A. C. 2010. Focus on innovation: something old, something new: innovation within existing food testing technologies. Food Saf. Mag. 16(2):12-15.
    • (2010) Food Saf. Mag. , vol.16 , Issue.2 , pp. 12-15
    • Philpott, A.C.1
  • 28
    • 79958114623 scopus 로고    scopus 로고
    • MicroSeq®: A 16S RRNA fene sequencing system for bacterial identification
    • In M. J. Miller (ed.), Encyclopedia of Rapid Microbiological Methods Bethesda, MD
    • Tanner, M. A., E. Scarpati, S. Sharma, and M. R. Furtado. 2006. MicroSeq®: A 16S rRNA gene sequencing system for bacterial identification 205-225. In M. J. Miller (ed.), Encyclopedia of Rapid Microbiological Methods, vol. 3. Parenteral Drug Association, Bethesda, MD.
    • (2006) Parenteral Drug Association , vol.3 , pp. 205-225
    • Tanner, M.A.1    Scarpati, E.2    Sharma, S.3    Furtado, M.R.4
  • 29
    • 33846224254 scopus 로고    scopus 로고
    • Identification of Vibrio isolates by a multiplex PCR assay and rpoB sequence determination
    • DOI 10.1128/JCM.01544-06
    • Tarr, C. L., J. S. Patel, N. D. Puhr, E. G. Sowers, C. A. Bopp, and N. A. Strockbine. 2007. Identification of Vibrio isolates by a multiplex PCR assay and rpoB sequence determination. J. Clin. Microbiol. 46:134-140. (Pubitemid 46106419)
    • (2007) Journal of Clinical Microbiology , vol.45 , Issue.1 , pp. 134-140
    • Tarr, C.L.1    Patel, J.S.2    Puhr, N.D.3    Sowers, E.G.4    Bopp, C.A.5    Strockbine, N.A.6
  • 30
    • 0023475710 scopus 로고
    • Sequence Analysis of the escherichia coli DnaE gene
    • Tomasiewicz, H. G., and C. S. McHenry. 1987. Sequence analysis of the Escherichia coli dnaE gene. J. Bacteriol. 169:5735-5744.
    • (1987) J. Bacteriol. , vol.169 , pp. 5735-5744
    • Tomasiewicz, H.G.1    McHenry, C.S.2
  • 31
    • 33845943048 scopus 로고    scopus 로고
    • Rapid detection of Vibrio species using liquid microsphere arrays and real-time PCR targeting the ftsZ locus
    • DOI 10.1099/jmm.0.46759-0
    • Tracz, D. M. G. Backhouse, A. B. Olson, J. K. McCrea, J. A. Walsh, L.-K. Ng, and M. W. Gilmour. 2007. Rapid detection of Vibrio species using liquid microsphere arrays and real-time PCR targeting the ftsZ locus. J. Med. Microbiol. 56:56-65. (Pubitemid 46036276)
    • (2007) Journal of Medical Microbiology , vol.56 , Issue.1 , pp. 56-65
    • Tracz, D.M.1    Backhouse, P.G.2    Olson, A.B.3    McCrea, J.K.4    Walsh, J.A.5    Ng, L.-K.6    Gilmour, M.W.7
  • 32
    • 0242520505 scopus 로고    scopus 로고
    • Beef products contaminated with escherichia Coli O157:H7
    • U.S. Department of Agriculture Food Safety and Inspection Service
    • U.S. Department of Agriculture, Food Safety and Inspection Service. 1999. Beef products contaminated with Escherichia Coli O157:H7. Fed. Regist. 64(11):2803-2805.
    • (1999) Fed. Regist. , vol.64 , Issue.11 , pp. 2803-2805
  • 33
    • 1342289038 scopus 로고    scopus 로고
    • Control of Listeria monocytogenes in ready-to-eat meat and poultry products; Final rule
    • U.S. Department of Agriculture, Food Safety and Inspection Service
    • U.S. Department of Agriculture, Food Safety and Inspection Service. 2003. Control of Listeria monocytogenes in ready-to-eat meat and poultry products; final rule. Fed. Regist. 68(109):34208-34254.
    • (2003) Fed. Regist. , vol.68 , Issue.109 , pp. 34208-34254
  • 34
    • 67650581323 scopus 로고    scopus 로고
    • Prevention of Salmonella Enteritidis in shell eggs during production, storage, and transportation; Final rule
    • Drug Administration Department of Health and Human Services
    • U.S. Food and Drug Administration, Department of Health and Human Services. 2009. Prevention of Salmonella Enteritidis in shell eggs during production, storage, and transportation; final rule. Fed. Regist. 74(130):33030-33101.
    • (2009) Fed. Regist. , vol.74 , Issue.130 , pp. 33030-33101
    • Food, U.S.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.