-
2
-
-
0035894590
-
Characterization of an eukaryotic peptide deformylase from Plasmodium falciparum
-
Bracchi-Ricard V, Nguyen KT, Zhou Y, Rajagopalan PTR, Chakrabarti D & Pei D (2001) Characterization of an eukaryotic peptide deformylase from Plasmodium falciparum. Arch Biochem Biophys 396: 162-170.
-
(2001)
Arch Biochem Biophys
, vol.396
, pp. 162-170
-
-
Bracchi-Ricard, V.1
Nguyen, K.T.2
Zhou, Y.3
Rajagopalan, P.T.R.4
Chakrabarti, D.5
Pei, D.6
-
3
-
-
33644535147
-
Natural products - the future scaffolds for novel antibiotics
-
Butler MS & Buss AD (2006) Natural products - the future scaffolds for novel antibiotics. Biochem Pharmacol 71: 919-929.
-
(2006)
Biochem Pharmacol
, vol.71
, pp. 919-929
-
-
Butler, M.S.1
Buss, A.D.2
-
4
-
-
0034673093
-
Actinonin, a naturally occurring antibacterial agent, is a potent deformylase inhibitor
-
Chen DZ, Patel DV, Hackbarth CJ et al. (2000) Actinonin, a naturally occurring antibacterial agent, is a potent deformylase inhibitor. Biochemistry 39: 1256-1262.
-
(2000)
Biochemistry
, vol.39
, pp. 1256-1262
-
-
Chen, D.Z.1
Patel, D.V.2
Hackbarth, C.J.3
-
5
-
-
63749099831
-
Structure and activity of human mitochondrial peptide deformylase, a novel cancer target
-
Escobar-Avarez S, Goldgur Y, Yang G, Querfelli O, Li Y & Sceinberg DA (2009) Structure and activity of human mitochondrial peptide deformylase, a novel cancer target. J Mol Biol 17: 1211-1228.
-
(2009)
J Mol Biol
, vol.17
, pp. 1211-1228
-
-
Escobar-Avarez, S.1
Goldgur, Y.2
Yang, G.3
Querfelli, O.4
Li, Y.5
Sceinberg, D.A.6
-
7
-
-
34848865009
-
Drug forecast - the peptide deformylase inhibitors as antibacterial agents
-
Guay DRP (2007) Drug forecast - the peptide deformylase inhibitors as antibacterial agents. Ther Clinic Risk Management 3: 513-525.
-
(2007)
Ther Clinic Risk Management
, vol.3
, pp. 513-525
-
-
Guay, D.R.P.1
-
8
-
-
2942608079
-
Molecular cloning and characterization of a new peptide deformylase from human pathogenic bacterium Helicobacter pylori
-
Han C, Wang Q, Dong L, Sun H, Peng S, Chen J, Yang Y, Yue J, Shen X & Jiang H (2004) Molecular cloning and characterization of a new peptide deformylase from human pathogenic bacterium Helicobacter pylori. Biochem Bioph Res Co 319: 1292-1298.
-
(2004)
Biochem Bioph Res Co
, vol.319
, pp. 1292-1298
-
-
Han, C.1
Wang, Q.2
Dong, L.3
Sun, H.4
Peng, S.5
Chen, J.6
Yang, Y.7
Yue, J.8
Shen, X.9
Jiang, H.10
-
10
-
-
0028790271
-
Mapping of the active site zinc ligands of peptide deformylase
-
Meinnel T, Lazennec C & Blanquet S (1995) Mapping of the active site zinc ligands of peptide deformylase. J Mol Biol 254: 175-183.
-
(1995)
J Mol Biol
, vol.254
, pp. 175-183
-
-
Meinnel, T.1
Lazennec, C.2
Blanquet, S.3
-
11
-
-
0031552348
-
Structure-function relationships within the peptide deformylase family. Evidence for a conserved architecture of the active site involving three conserved motifs and a metal ion
-
Meinnel T, Lazennec C, Villoing S & Blanquet S (1997) Structure-function relationships within the peptide deformylase family. Evidence for a conserved architecture of the active site involving three conserved motifs and a metal ion. J Mol Biol 267: 749-761.
-
(1997)
J Mol Biol
, vol.267
, pp. 749-761
-
-
Meinnel, T.1
Lazennec, C.2
Villoing, S.3
Blanquet, S.4
-
12
-
-
11644261806
-
Automated docking using a Lamarckian genetic algorithm and an empirical binding free energy function
-
Morris GM, Goodsell DS, Halliday RS, Huey R, Hart WE, Belew RK & Olson AJ (1998) Automated docking using a Lamarckian genetic algorithm and an empirical binding free energy function. J Comput Chem 19: 1639-1662.
-
(1998)
J Comput Chem
, vol.19
, pp. 1639-1662
-
-
Morris, G.M.1
Goodsell, D.S.2
Halliday, R.S.3
Huey, R.4
Hart, W.E.5
Belew, R.K.6
Olson, A.J.7
-
13
-
-
62649139034
-
Crystal structure of an EfPDF complex with Met-Ala-Ser based on crystallographic packing
-
Nam KH, Kim KH, Kim EEK & Hwang KY (2009) Crystal structure of an EfPDF complex with Met-Ala-Ser based on crystallographic packing. Biochem Bioph Res Co 381: 630-633.
-
(2009)
Biochem Bioph Res Co
, vol.381
, pp. 630-633
-
-
Nam, K.H.1
Kim, K.H.2
Kim, E.E.K.3
Hwang, K.Y.4
-
14
-
-
27344436659
-
Scalable molecular dynamics with NAMD
-
Phillips JC, Braun R, Wang W, Gumbart J, Tajkhorshid E, Villa E, Chipot C, Skeel RD, Kale L & Schulten K (2005) Scalable molecular dynamics with NAMD. J Comp Chem 26: 1781-1802.
-
(2005)
J Comp Chem
, vol.26
, pp. 1781-1802
-
-
Phillips, J.C.1
Braun, R.2
Wang, W.3
Gumbart, J.4
Tajkhorshid, E.5
Villa, E.6
Chipot, C.7
Skeel, R.D.8
Kale, L.9
Schulten, K.10
-
15
-
-
56249090355
-
Peptide deformylase inhibitors of Mycobacterium tuberculosis
-
Bioorg Med Chem Lett
-
Pichota A, Duraiswamy J, Yin Z et al. (2008) Peptide deformylase inhibitors of Mycobacterium tuberculosis: synthesis, structural investigations, and biological results. Bioorg Med Chem Lett 18: 6568-6572.
-
(2008)
synthesis, structural investigations, and biological results
, vol.18
, pp. 6568-6572
-
-
Pichota, A.1
Duraiswamy, J.2
Yin, Z.3
-
16
-
-
0032575507
-
Oxygen-mediated inactivation of peptide deformylase
-
Rajagopalan PTR & Pei D (1998) Oxygen-mediated inactivation of peptide deformylase. J Biol Chem 273: 22305-22310.
-
(1998)
J Biol Chem
, vol.273
, pp. 22305-22310
-
-
Rajagopalan, P.T.R.1
Pei, D.2
-
17
-
-
0030696625
-
Purification, characterization, and inhibition of peptide deformylase from Escherichia coli
-
Rajagopalan PTR, Datta A & Pei D (1997a) Purification, characterization, and inhibition of peptide deformylase from Escherichia coli. Biochemistry 36: 13910-13918.
-
(1997)
Biochemistry
, vol.36
, pp. 13910-13918
-
-
Rajagopalan, P.T.R.1
Datta, A.2
Pei, D.3
-
19
-
-
0004136246
-
-
Sambrook J, Fritsch FE & Maniatis T, eds) () Cold Spring Harbor Laboratory, Cold Spring Harbor, NY.
-
Sambrook J, Fritsch FE & Maniatis T, (eds) (1989) Molecular Cloning: A Laboratory Manual. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY.
-
(1989)
Molecular Cloning: A Laboratory Manual
-
-
-
20
-
-
28044432517
-
Identification of regions involved in enzymatic stability of peptide deformylase of Mycobacterium tuberculosis
-
Saxena R & Chakraborti PK (2005a) Identification of regions involved in enzymatic stability of peptide deformylase of Mycobacterium tuberculosis. J Bacteriol 187: 8216-8220.
-
(2005)
J Bacteriol
, vol.187
, pp. 8216-8220
-
-
Saxena, R.1
Chakraborti, P.K.2
-
21
-
-
19444368610
-
The carboxy-terminal end of the peptide deformylase from Mycobacterium tuberculosis is indispensable for its enzymatic activity
-
Saxena R & Chakraborti PK (2005b) The carboxy-terminal end of the peptide deformylase from Mycobacterium tuberculosis is indispensable for its enzymatic activity. Biochem Bioph Res Co 332: 418-425.
-
(2005)
Biochem Bioph Res Co
, vol.332
, pp. 418-425
-
-
Saxena, R.1
Chakraborti, P.K.2
-
22
-
-
53049090380
-
Three consecutive arginines are important for the mycobacterial peptide deformylase enzyme activity
-
Saxena R, Kanudia P, Datt M, Dar HH, Karthikeyan S, Singh B & Chakraborti PK (2008) Three consecutive arginines are important for the mycobacterial peptide deformylase enzyme activity. J Biol Chem 238: 23754-23764.
-
(2008)
J Biol Chem
, vol.238
, pp. 23754-23764
-
-
Saxena, R.1
Kanudia, P.2
Datt, M.3
Dar, H.H.4
Karthikeyan, S.5
Singh, B.6
Chakraborti, P.K.7
-
23
-
-
33750578846
-
Peptide deformylase inhibitors as potent antimycobacterial agents
-
Teo JWP, Thayalan P, Beer D et al. (2006) Peptide deformylase inhibitors as potent antimycobacterial agents. Antimicrob Agents Ch 50: 3665-3673.
-
(2006)
Antimicrob Agents Ch
, vol.50
, pp. 3665-3673
-
-
Teo, J.W.P.1
Thayalan, P.2
Beer, D.3
-
24
-
-
0031574072
-
The CLUSTAL-X windows interface
-
Nucleic Acids Res
-
Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F & Higgins DG (1997) The CLUSTAL-X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25: 4876-4882.
-
(1997)
flexible strategies for multiple sequence alignment aided by quality analysis tools
, vol.25
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
-
25
-
-
58149165033
-
Relative tolerance of an enzymatic molten globule and its thermostable counterpart to point mutation
-
Woycechowsky KJ, Choutko A, Vamvaca K & Hilvert D (2008) Relative tolerance of an enzymatic molten globule and its thermostable counterpart to point mutation. Biochemistry 47: 13489-13496.
-
(2008)
Biochemistry
, vol.47
, pp. 13489-13496
-
-
Woycechowsky, K.J.1
Choutko, A.2
Vamvaca, K.3
Hilvert, D.4
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