-
1
-
-
39749113080
-
Clonal integration of a polyomavirus in human Merkel cell carcinoma
-
DOI 10.1126/science.1152586
-
Feng H., Shuda M., Chang Y., and Moore P.S. Clonal integration of a polyomavirus in human Merkel cell carcinoma Science 319 2008 1096 1100 (Pubitemid 351300792)
-
(2008)
Science
, vol.319
, Issue.5866
, pp. 1096-1100
-
-
Feng, H.1
Shuda, M.2
Chang, Y.3
Moore, P.S.4
-
2
-
-
55849098118
-
T antigen mutations are a human tumor-specific signature for Merkel cell polyomavirus
-
Shuda M., Feng H.C., Kwun H.J., Rosen S.T., Gjoerup O., Moore P.S., and Chang Y. T antigen mutations are a human tumor-specific signature for Merkel cell polyomavirus Proc. Natl Acad. Sci. USA 105 2008 16272 16277
-
(2008)
Proc. Natl Acad. Sci. USA
, vol.105
, pp. 16272-16277
-
-
Shuda, M.1
Feng, H.C.2
Kwun, H.J.3
Rosen, S.T.4
Gjoerup, O.5
Moore, P.S.6
Chang, Y.7
-
3
-
-
70450170962
-
The minimum replication origin of Merkel cell polyomavirus has a unique large T-antigen loading architecture and requires small T-antigen expression for optimal replication
-
Kwun H.J., Guastafierro A., Shuda M., Meinke G., Bohm A., Moore P.S., and Chang Y. The minimum replication origin of Merkel cell polyomavirus has a unique large T-antigen loading architecture and requires small T-antigen expression for optimal replication J. Virol. 83 2009 12118 12128
-
(2009)
J. Virol.
, vol.83
, pp. 12118-12128
-
-
Kwun, H.J.1
Guastafierro, A.2
Shuda, M.3
Meinke, G.4
Bohm, A.5
Moore, P.S.6
Chang, Y.7
-
4
-
-
79751493943
-
Pathogenesis of progressive multifocal leukoencephalopathy-revisited
-
White M.K., and Khalili K. Pathogenesis of progressive multifocal leukoencephalopathy-revisited J. Infect. Dis. 203 2011 578 586
-
(2011)
J. Infect. Dis.
, vol.203
, pp. 578-586
-
-
White, M.K.1
Khalili, K.2
-
5
-
-
0026724311
-
Structure and function of simian virus 40 large tumor antigen
-
Fanning E., and Knippers R. Structure and function of simian virus 40 large tumor antigen Annu. Rev. Biochem. 61 1992 55 85
-
(1992)
Annu. Rev. Biochem.
, vol.61
, pp. 55-85
-
-
Fanning, E.1
Knippers, R.2
-
6
-
-
0034573640
-
SV40 large T antigen functions in DNA replication and transformation
-
Simmons D.T. SV40 large T antigen functions in DNA replication and transformation Adv. Virus Res. 55 2000 75 134
-
(2000)
Adv. Virus Res.
, vol.55
, pp. 75-134
-
-
Simmons, D.T.1
-
7
-
-
0022635436
-
Guanine nucleotide contacts within viral DNA sequences bound by polyomavirus large T antigen
-
Cowie A., and Kamen R. Guanine nucleotide contacts within viral DNA sequences bound by polyomavirus large T antigen J. Virol. 57 1986 505 514 (Pubitemid 16147854)
-
(1986)
Journal of Virology
, vol.57
, Issue.2
, pp. 505-514
-
-
Cowie, A.1
Kamen, R.2
-
8
-
-
59349112711
-
SV40: Cell transformation and tumorigenesis
-
Pipas J.M. SV40: Cell transformation and tumorigenesis Virology 384 2009 294 303
-
(2009)
Virology
, vol.384
, pp. 294-303
-
-
Pipas, J.M.1
-
9
-
-
0029970923
-
An N-terminal deletion mutant of simian virus 40 (SV40) large T antigen oligomerizes incorrectly on SV40 DNA but retains the ability to bind to DNA polymerase α and replicate SV40 DNA in vitro
-
Weisshart K., Bradley M.K., Weiner B.M., Schneider C., Moarefi I., Fanning E., and Arthur A.K. An N-terminal deletion mutant of simian virus 40 (SV40) large T antigen oligomerizes incorrectly on SV40 DNA but retains the ability to bind to DNA polymerase alpha and replicate SV40 DNA in vitro J. Virol. 70 1996 3509 3516 (Pubitemid 26157330)
-
(1996)
Journal of Virology
, vol.70
, Issue.6
, pp. 3509-3516
-
-
Weisshart, K.1
Bradley, M.K.2
Weiner, B.M.3
Schneider, C.4
Moarefi, I.5
Fanning, E.6
Arthur, A.K.7
-
10
-
-
0024550638
-
ATP-dependent assembly of double hexamers of SV40 T antigen at the viral origin of DNA replication
-
DOI 10.1038/338658a0
-
Mastrangelo I.A., Hough P.V.C., Wall J.S., Dodson M., Dean F.B., and Hurwitz J. ATP-dependent assembly of double hexamers of SV40 T antigen at the viral origin of DNA replication Nature 338 1989 658 662 (Pubitemid 19104646)
-
(1989)
Nature
, vol.338
, Issue.6217
, pp. 658-662
-
-
Mastrangelo, I.A.1
Hough, P.V.C.2
Wall, J.S.3
Dodson, M.4
Dean, F.B.5
Hurwitz, J.6
-
11
-
-
0033988190
-
Large T-antigen double hexamers imaged at the simian virus 40 origin of replication
-
Valle M., Gruss C., Halmer L., Carazo J.M., and Donate L.E. Large T-antigen double hexamers imaged at the simian virus 40 origin of replication Mol. Cell. Biol. 20 2000 34 41 (Pubitemid 30002545)
-
(2000)
Molecular and Cellular Biology
, vol.20
, Issue.1
, pp. 34-41
-
-
Valle, M.1
Gruss, C.2
Halmer, L.3
Carazo, J.M.4
Donate, L.E.5
-
12
-
-
78649677837
-
Origin DNA melting and unwinding in DNA replication
-
Gai D., Chang Y.P., and Chen X.S. Origin DNA melting and unwinding in DNA replication Curr. Opin. Struct. Biol. 20 2010 756 762
-
(2010)
Curr. Opin. Struct. Biol.
, vol.20
, pp. 756-762
-
-
Gai, D.1
Chang, Y.P.2
Chen, X.S.3
-
13
-
-
0026587625
-
Spacing is crucial for coordination of domain functions within the simian virus 40 core origin of replication
-
Parsons R., and Tegtmeyer P. Spacing is crucial for coordination of domain functions within the simian virus 40 core origin of replication J. Virol. 66 1992 1933 1942
-
(1992)
J. Virol.
, vol.66
, pp. 1933-1942
-
-
Parsons, R.1
Tegtmeyer, P.2
-
14
-
-
34548151496
-
Quantitative analysis of the binding of simian virus 40 large T antigen to DNA
-
DOI 10.1128/JVI.00384-07
-
Fradet-Turcotte A., Vincent C., Joubert S., Bullock P.A., and Archambault J. Quantitative analysis of the binding of simian virus 40 large T antigen to DNA J. Virol. 81 2007 9162 9174 (Pubitemid 47311459)
-
(2007)
Journal of Virology
, vol.81
, Issue.17
, pp. 9162-9174
-
-
Fradet-Turcotte, A.1
Vincent, C.2
Joubert, S.3
Bullock, P.A.4
Archambault, J.5
-
15
-
-
0023587849
-
Simian virus 40 large tumor antigen requires three core replication origin domains for DNA unwinding and replication in vitro
-
Dean F.B., Borowiec J.A., Ishimi Y., Deb S., Tegtmeyer P., and Hurwitz J. Simian virus 40 large tumor antigen requires three core replication origin domains for DNA unwinding and replication in vitro Proc. Natl Acad. Sci. USA 84 1987 8267 8271 (Pubitemid 18033449)
-
(1987)
Proceedings of the National Academy of Sciences of the United States of America
, vol.84
, Issue.23
, pp. 8267-8271
-
-
Dean, F.B.1
Borowiec, J.A.2
Ishimi, Y.3
Deb, S.4
Tegtmeyer, P.5
Hurwitz, J.6
-
16
-
-
0031893217
-
Assembly of T-antigen double hexamers on the simian virus 40 core origin requires only a subset of the available binding sites
-
Joo W.S., Kim H.Y., Purviance J.D., Sreekumar K.R., and Bullock P.A. Assembly of T-antigen double hexamers on the simian virus 40 core origin requires only a subset of the available binding sites Mol. Cell. Biol. 18 1998 2677 2687 (Pubitemid 28183437)
-
(1998)
Molecular and Cellular Biology
, vol.18
, Issue.5
, pp. 2677-2687
-
-
Joo, W.S.1
Kim, H.Y.2
Purviance, J.D.3
Sreekumar, K.R.4
Bullock, P.A.5
-
17
-
-
0023444754
-
The AT-rich sequence of the SV40 control region influences the binding of SV40 T-antigen to binding site-2 and site-3
-
Muller D., Ugi I., Ballas K., Reiser P., Henning R., and Montenarh M. The AT-rich sequence of the SV40 control region influences the binding of SV40 T-antigen to binding site-2 and site-3 Virology 161 1987 81 90
-
(1987)
Virology
, vol.161
, pp. 81-90
-
-
Muller, D.1
Ugi, I.2
Ballas, K.3
Reiser, P.4
Henning, R.5
Montenarh, M.6
-
18
-
-
33846975786
-
The crystal structure of the SV40 T-antigen origin binding domain in complex with DNA
-
Meinke G., Phelan P.J., Moine S., Bochkareva E., Bochkarev A., Bullock P.A., and Bohm A. The crystal structure of the SV40 T-antigen origin binding domain in complex with DNA PloS Biol. 5 2007 e23
-
(2007)
PloS Biol.
, vol.5
, pp. 23
-
-
Meinke, G.1
Phelan, P.J.2
Moine, S.3
Bochkareva, E.4
Bochkarev, A.5
Bullock, P.A.6
Bohm, A.7
-
19
-
-
33845686801
-
Structure of the origin-binding domain of simian virus 40 large T antigen bound to DNA
-
DOI 10.1038/sj.emboj.7601452, PII 7601452
-
Bochkareva E., Martynowski D., Seitova A., and Bochkarev A. Structure of the origin-binding domain of simian virus 40 large T antigen bound to DNA EMBO J. 25 2006 5961 5969 (Pubitemid 44967777)
-
(2006)
EMBO Journal
, vol.25
, Issue.24
, pp. 5961-5969
-
-
Bochkareva, E.1
Martynowski, D.2
Seitova, A.3
Bochkarev, A.4
-
20
-
-
0030443808
-
Solution structure of the origin DNA-binding domain of SV40 T-antigen
-
DOI 10.1038/nsb1296-1034
-
Luo X., Sanford D.G., Bullock P.A., and Bachovchin W.W. Solution structure of the origin DNA-binding domain of SV40 T-antigen Nat. Struct. Biol. 3 1996 1034 1039 (Pubitemid 27014632)
-
(1996)
Nature Structural Biology
, vol.3
, Issue.12
, pp. 1034-1039
-
-
Luo, X.1
Sanford, D.G.2
Bullock, P.A.3
Bachovchin, W.W.4
-
21
-
-
33646193384
-
Crystal structure of the simian virus 40 large T-antigen origin-binding domain
-
Meinke G., Bullock P.A., and Bohm A. Crystal structure of the simian virus 40 large T-antigen origin-binding domain J. Virol. 80 2006 4304 4312
-
(2006)
J. Virol.
, vol.80
, pp. 4304-4312
-
-
Meinke, G.1
Bullock, P.A.2
Bohm, A.3
-
22
-
-
0033634815
-
Crystal structure of the DNA binding domain of the replication initiation protein E1 from papillomavirus
-
Enemark E.J., Chen G., Vaughn D.E., Stenlund A., and Joshua-Tor L. Crystal structure of the DNA binding domain of the replication initiation protein E1 from papillomavirus Mol. Cell 6 2000 149 158
-
(2000)
Mol. Cell
, vol.6
, pp. 149-158
-
-
Enemark, E.J.1
Chen, G.2
Vaughn, D.E.3
Stenlund, A.4
Joshua-Tor, L.5
-
23
-
-
0028004607
-
Crystal structure at 1.92 Å resolution of the RNA-binding domain of the U1A spliceosomal protein complexed with an RNA hairpin
-
Oubridge C., Ito N., Evans P., Teo C., and Nagai K. Crystal structure at 1.92 Å resolution of the RNA-binding domain of the U1A spliceosomal protein complexed with an RNA hairpin Nature 372 1994 432 438
-
(1994)
Nature
, vol.372
, pp. 432-438
-
-
Oubridge, C.1
Ito, N.2
Evans, P.3
Teo, C.4
Nagai, K.5
-
24
-
-
0342927495
-
Structure of tandem RNA recognition motifs from polypyrimidine tract binding protein reveals novel features of the RRM fold
-
Conte M., Grüne T., Ghuman J., Kelly G., Ladas A., Matthews S., and Curry S. Structure of tandem RNA recognition motifs from polypyrimidine tract binding protein reveals novel features of the RRM fold EMBO J. 19 2000 3132 3141 (Pubitemid 30386783)
-
(2000)
EMBO Journal
, vol.19
, Issue.12
, pp. 3132-3141
-
-
Conte, M.R.1
Grune, T.2
Ghuman, J.3
Kelly, G.4
Ladas, A.5
Matthews, S.6
Curry, S.7
-
25
-
-
0036671409
-
Structural unity among viral origin binding proteins: Crystal structure of the nuclease domain of adeno-associated virus Rep
-
DOI 10.1016/S1097-2765(02)00592-0
-
Hickman A.B., Ronning D.R., Kotin R.M., and Dyda F. Structural unity among viral origin binding proteins: crystal structure of the nuclease domain of adeno-associated virus Rep Mol. Cell 10 2002 327 337 (Pubitemid 35007347)
-
(2002)
Molecular Cell
, vol.10
, Issue.2
, pp. 327-337
-
-
Hickman, A.B.1
Ronning, D.R.2
Kotin, R.M.3
Dyda, F.4
-
26
-
-
0036678683
-
The structure of a replication initiator unites diverse aspects of nucleic acid metabolism
-
Campos-Olivas R., Louis J.M., Clerot D., Gronenborn B., and Gronenborn A.M. The structure of a replication initiator unites diverse aspects of nucleic acid metabolism Proc. Natl Acad. Sci. USA 99 2002 10310 10315
-
(2002)
Proc. Natl Acad. Sci. USA
, vol.99
, pp. 10310-10315
-
-
Campos-Olivas, R.1
Louis, J.M.2
Clerot, D.3
Gronenborn, B.4
Gronenborn, A.M.5
-
27
-
-
0025320032
-
Four major sequence elements of simian virus 40 large T antigen coordinate its specific and nonspecific DNA binding
-
Simmons D.T., Loeber G., and Tegtmeyer P. Four major sequence elements of simian virus 40 large T antigen coordinate its specific and nonspecific DNA binding J. Virol. 64 1990 1973 1983 (Pubitemid 20148438)
-
(1990)
Journal of Virology
, vol.64
, Issue.5
, pp. 1973-1983
-
-
Simmons, D.T.1
Loeber, G.2
Tegtmeyer, P.3
-
28
-
-
78650668555
-
Structure-based analysis of the interaction between the simian virus 40 T-antigen origin binding domain and single-stranded DNA
-
Meinke G., Phelan P.J., Fradet-Turcotte A., Bohm A., Archambault J., and Bullock P.A. Structure-based analysis of the interaction between the simian virus 40 T-antigen origin binding domain and single-stranded DNA J. Virol. 85 2011 818 827
-
(2011)
J. Virol.
, vol.85
, pp. 818-827
-
-
Meinke, G.1
Phelan, P.J.2
Fradet-Turcotte, A.3
Bohm, A.4
Archambault, J.5
Bullock, P.A.6
-
29
-
-
33751576173
-
Structural mechanism of RPA loading on DNA during activation of a simple pre-replication complex
-
DOI 10.1038/sj.emboj.7601432, PII 7601432
-
Jiang X., Klimovich V., Arunkumar A.I., Hysinger E.B., Wang Y., and Ott R.D. Structural mechanism of RPA loading on DNA during activation of a simple pre-replication complex EMBO J. 25 2006 5516 5526 (Pubitemid 44847192)
-
(2006)
EMBO Journal
, vol.25
, Issue.23
, pp. 5516-5526
-
-
Jiang, X.1
Klimovich, V.2
Arunkumar, A.I.3
Hysinger, E.B.4
Wang, Y.5
Ott, R.D.6
Guler, G.D.7
Weiner, B.8
Chazin, W.J.9
Fanning, E.10
-
30
-
-
0026794985
-
Nonspecific DNA binding activity of simian virus 40 large T antigen: Evidence for the cooperation of two regions for full activity
-
Lin H.J., Upson R.H., and Simmons D.T. Nonspecific DNA binding activity of simian virus 40 large T antigen: evidence for the cooperation of two regions for full activity J. Virol. 66 1992 5443 5452
-
(1992)
J. Virol.
, vol.66
, pp. 5443-5452
-
-
Lin, H.J.1
Upson, R.H.2
Simmons, D.T.3
-
31
-
-
0026010914
-
The DNA-binding properties of polyomavirus large T antigen are altered by ATP and other nucleotides
-
Lorimer H.E., Wang E.H., and Prives C. The DNA-binding properties of polyomavirus large T antigen are altered by ATP and other nucleotides J. Virol. 65 1991 687 699
-
(1991)
J. Virol.
, vol.65
, pp. 687-699
-
-
Lorimer, H.E.1
Wang, E.H.2
Prives, C.3
-
32
-
-
0037086545
-
Crystal structures of two intermediates in the assembly of the papillomavirus replication initiation complex
-
DOI 10.1093/emboj/21.6.1487
-
Enemark E.J., Stenlund A., and Joshua-Tor L. Crystal structures of two intermediates in the assembly of the papillomavirus replication initiation complex EMBO J. 21 2002 1487 1496 (Pubitemid 34246527)
-
(2002)
EMBO Journal
, vol.21
, Issue.6
, pp. 1487-1496
-
-
Enemark, E.J.1
Stenlund, A.2
Joshua-Tor, L.3
-
33
-
-
0037405947
-
Characterization of the DNA-binding properties of the origin-binding domain of simian virus 40 large T antigen by fluorescence anisotropy
-
DOI 10.1128/JVI.77.9.5512-5518.2003
-
Titolo S., Welchner E., White P.W., and Archambault J. Characterization of the DNA-binding properties of the origin-binding domain of simian virus 40 large T antigen by fluorescence anisotropy J. Virol. 77 2003 5512 5518 (Pubitemid 36460966)
-
(2003)
Journal of Virology
, vol.77
, Issue.9
, pp. 5512-5518
-
-
Titolo, S.1
Welchner, E.2
White, P.W.3
Archambault, J.4
-
34
-
-
0009607249
-
Simian virus 40 (SV40) DNA replication: SV40 large T antigen unwinds DNA containing the SV40 origin of replication
-
DOI 10.1073/pnas.84.1.16
-
Dean F.B., Bullock P., Murakami Y., Wobbe C.R., Weissbach L., and Hurwitz J. Simian virus 40 (SV40) DNA replication: SV40 large T antigen unwinds DNA containing the SV40 origin of replication Proc. Natl Acad. Sci. USA 84 1987 16 20 (Pubitemid 17013569)
-
(1987)
Proceedings of the National Academy of Sciences of the United States of America
, vol.84
, Issue.1
, pp. 16-20
-
-
Dean, F.B.1
Bullock, P.2
Murakami, Y.3
-
36
-
-
34447508216
-
Phaser crystallographic software
-
DOI 10.1107/S0021889807021206, PII S0021889807021206
-
McCoy A.J., Grosse-Kunstleve R.W., Adams P.D., Winn M.D., Storoni L.C., and Read R.J. Phaser crystallographic software J. Appl. Crystallogr. 40 2007 658 674 (Pubitemid 47080256)
-
(2007)
Journal of Applied Crystallography
, vol.40
, Issue.4
, pp. 658-674
-
-
McCoy, A.J.1
Grosse-Kunstleve, R.W.2
Adams, P.D.3
Winn, M.D.4
Storoni, L.C.5
Read, R.J.6
-
38
-
-
3543012707
-
Crystallography & NMR System: A new software suite for macromolecular structure determination
-
Brünger A.T., Adams P.D., Clore G.M., DeLano W.L., Gros P., and Grosse-Kunstleve R.W. Crystallography & NMR System: a new software suite for macromolecular structure determination Acta Crystallogr. Sect. D 54 1998 905 921
-
(1998)
Acta Crystallogr. Sect. D
, vol.54
, pp. 905-921
-
-
Brünger, A.T.1
Adams, P.D.2
Clore, G.M.3
Delano, W.L.4
Gros, P.5
Grosse-Kunstleve, R.W.6
-
39
-
-
76449098262
-
PHENIX: A comprehensive Python-based system for macromolecular structure solution
-
Adams P.D., P.V. Afonine, G. Bunkóczi, Chen V.B., Davis I.W., and Echols N. PHENIX: a comprehensive Python-based system for macromolecular structure solution Acta Crystallogr. Sect. D 66 2010 213 221
-
(2010)
Acta Crystallogr. Sect. D
, vol.66
, pp. 213-221
-
-
Adams, P.D.1
Afonine, P.V.2
Bunkóczi, G.3
Chen, V.B.4
Davis, I.W.5
Echols, N.6
-
40
-
-
70450261721
-
Conformational analysis of nucleic acids revisited: Curves+
-
Lavery R., Moakher M., Maddocks J.H., Petkeviciute D., and Zakrzewska K. Conformational analysis of nucleic acids revisited: Curves+ Nucleic Acids Res. 37 2009 5917 5929
-
(2009)
Nucleic Acids Res.
, vol.37
, pp. 5917-5929
-
-
Lavery, R.1
Moakher, M.2
Maddocks, J.H.3
Petkeviciute, D.4
Zakrzewska, K.5
|