Dermatan sulfate in tunicate phylogeny: Order-specific sulfation pattern and the effect of [→4IdoA(2-Sulfate)β-1→3GalNAc(4-Sulfate)β- 1→] motifs in dermatan sulfate on heparin cofactor II activity

BMC Biochemistry

Volumn 12, Issue 1, 2011, Pages

  Kozlowski, Eliene O ^a   Lima, Paula C ^a   Vicente, Cristina P ^b   Lotufo, Tito ^c   Bao, Xingfeng ^d,e   Sugahara, Kazuyuki ^d,f   Pavão, Mauro Sg ^a  

^a FEDERAL UNIVERSITY OF RIO DE JANEIRO   (Brazil)

^b UNIVERSITY OF CAMPINAS   (Brazil)

^c FEDERAL UNIVERSITY OF CEARÁ   (Brazil)

^d KOBE PHARMACEUTICAL UNIVERSITY   (Japan)

^e BURNHAM INSTITUTE   (United States)

^f HOKKAIDO UNIVERSITY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

AGAROSE; DERMATAN SULFATE; DISACCHARIDE; HEPARIN COFACTOR II; N ACETYLGALACTOSAMINE; ANTITHROMBIN; CHONDROITIN ABC LYASE; HEXURONIC ACID;

ARTICLE; CIONA INTESTINALIS; HALOCYNTHIA RORETZI; HERDMANIA PALLIDA; NONHUMAN; PHYLOGENY; POLYACRYLAMIDE GEL ELECTROPHORESIS; PROTEIN MOTIF; PURIFICATION; SULFATION; AGAR GEL ELECTROPHORESIS; ANIMAL; CARBOHYDRATE ANALYSIS; CHEMISTRY; GENETICS; HUMAN; METABOLISM; MOLECULAR EVOLUTION; MOLECULAR GENETICS; PARTIAL THROMBOPLASTIN TIME; SPECIES DIFFERENCE; UROCHORDATA; ERROR;

ASCIDIA; ASCIDIA NIGRA; ASCIDIACEA; CIONA INTESTINALIS; HALOCYNTHIA PYRIFORMIS; HALOCYNTHIA RORETZI; HERDMANIA (SEA SQUIRT); PHLEBOBRANCHIA; STOLIDOBRANCHIA; STYELA PLICATA; UROCHORDATA;

ANIMALS; ANTITHROMBINS; CARBOHYDRATE SEQUENCE; CHONDROITIN ABC LYASE; DERMATAN SULFATE; ELECTROPHORESIS, AGAR GEL; ELECTROPHORESIS, POLYACRYLAMIDE GEL; EVOLUTION, MOLECULAR; HEPARIN COFACTOR II; HEXURONIC ACIDS; HUMANS; MOLECULAR SEQUENCE DATA; PARTIAL THROMBOPLASTIN TIME; PHYLOGENY; SPECIES SPECIFICITY; UROCHORDATA;

EID: 79957477351     PISSN: None     EISSN: 14712091     Source Type: Journal    
DOI: 10.1186/1471-2091-12-29     Document Type: Article

References (28)

1. Biosynthesis of chondroitin sulfate: from the early, precursor discoveries to nowadays, genetics approaches. MS Pavao AC Vilela-Silva PA Mourao, Adv Pharmacol 2006 53 117 140 17239764
2. Structural and conformational aspects of the anticoagulant and anti-thrombotic activity of heparin and dermatan sulfate. B Casu M (Pubitemid 38380073)
3. Structure of a dermatan sulfate hexasaccharide that binds to heparin cofactor II with high affinity. MM Maimone DM Tollefsen, J Biol Chem 1991 266 14830 1860877
4. A functional dermatan sulfate epitope containing iduronate(2-O-sulfate) alpha1-3GalNAc(6-O-sulfate) disaccharide in the mouse brain: demonstration using a novel monoclonal antibody raised against dermatan sulfate of ascidian Ascidia nigra. X Bao MS Pavao JC Dos Santos K Sugahara, J Biol Chem 2005 280 23184 23193 10.1074/jbc.M503036200 15849184 (Pubitemid 40853230)
5. A unique dermatan sulfate-like glycosaminoglycan from ascidian. Its structure and the effect of its unusual sulfation pattern on anticoagulant activity. MS Pavao PA Mourao B Mulloy DM Tollefsen, J Biol Chem 1995 270 31027 31036 10.1074/jbc.270.52.31027 8537360 (Pubitemid 26012188)
6. Highly sulfated dermatan sulfates from Ascidians. Structure versus anticoagulant activity of these glycosaminoglycans. MS Pavao KR Aiello CC Werneck LC Silva AP Valente B Mulloy NS Colwell DM Tollefsen PA Mourao, J Biol Chem 1998 273 27848 27857 10.1074/jbc.273.43.27848 9774395 (Pubitemid 28496072)
7. Structure and anticoagulant properties of sulfated glycosaminoglycans from primitive Chordates. MS Pavao, An Acad Bras Cienc 2002 74 105 112 10.1590/S0001-37652002000100007 11960179 (Pubitemid 135695057)
8. An Early Cambrian tunicate from China. DG Shu L Chen J Han XL Zhang, Nature 2001 411 472 473 10.1038/35078069 11373678 (Pubitemid 32494391)
9. Primitive deuterostomes from the Chengjiang Lagerstatte (Lower Cambrian, China). DG Shu SC Morris J Han L Chen XL Zhang ZF Zhang HQ Liu Y Li JN Liu, Nature 2001 414 419 424 10.1038/35106514 11719797 (Pubitemid 34173719)
10. Vertebrate origins: does the tunic make the man? F Delsuc D Baurain H Philippe, Med Sci (Paris) 2006 22 688 690 10.1051/medsci/20062289688
11. Tunicates and not cephalochordates are the closest living relatives of vertebrates. F Delsuc H Brinkmann D Chourrout H Philippe, Nature 2006 439 965 968 10.1038/nature04336 16495997 (Pubitemid 43292413)
12. Erosion of phylogenetic signal in tunicate mitochondrial genomes on different levels of analysis. T Stach A Braband L Podsiadlowski, Mol Phylogenet Evol 2010 55 860 870 10.1016/j.ympev.2010.03.011 20302953
13. Deciphering deuterostome phylogeny: molecular, morphological and palaeontological perspectives. BJ Swalla AB Smith, Philos Trans R Soc Lond B Biol Sci 2008 363 1557 1568 10.1098/rstb.2007.2246 18192178 (Pubitemid 351363990)
14. An updated 18S rRNA phylogeny of tunicates based on mixture and secondary structure models. G Tsagkogeorga X Turon RR Hopcroft MK Tilak T Feldstein N Shenkar Y Loya D Huchon EJ Douzery F Delsuc, BMC Evol Biol 2009 9 187 10.1186/1471-2148-9-187 19656395
15. The Australian ascidacea. Part IPhlebobranchia and Stolidobranchia. P Kott, Mem Qd Mus 1985 23 1 140
16. Inorganic Aspects of the Blood-Chemistry of Ascidians - Ionic Composition, and Ti, V, and Fe in the Blood-Plasma of Pyura-Chilensis and Ascidia-Dispar. DA Roman J Molina L Rivera, Biological Bulletin 1988 175 154 166 10.2307/1541903
17. Patterns of uronosyl epimerization and 4-/6-O-sulphation in chondroitin/dermatan sulphate from decorin and biglycan of various bovine tissues. F Cheng D Heinegard A Malmstrom A Schmidtchen K Yoshida LA Fransson, Glycobiology 1994 4 685 696 10.1093/glycob/4.5.685 7881183 (Pubitemid 24327734)
18. Neuronal cell adhesion, mediated by the heparin-binding neuroregulatory factor midkine, is specifically inhibited by chondroitin sulfate E. Structural ans functional implications of the over-sulfated chondroitin sulfate. C Ueoka N Kaneda I Okazaki S Nadanaka T Muramatsu K Sugahara, J Biol Chem 2000 275 37407 37413 10.1074/jbc.M002538200 10978312 (Pubitemid 32004844)
19. Developmental regulation of the sulfation profile of chondroitin sulfate chains in the chicken embryo brain. H Kitagawa K Tsutsumi Y Tone K Sugahara, J Biol Chem 1997 272 31377 31381 10.1074/jbc.272.50.31377 9395468 (Pubitemid 28013273)
20. Identification of chondroitin/dermatan sulfotransferases in the protochordate, Ciona intestinalis. A Tetsukawa J Nakamura S Fujiwara, Comp Biochem Physiol B Biochem Mol Biol 2010 157 205 212 10.1016/j.cbpb.2010.06.009 20601060
21. Unbalanced effects of dermatan sulfates with different sulfation patterns on coagulation, thrombosis and bleeding. CP Vicente P Zancan LL Peixoto R Alves-Sa FS Araujo PA Mourao MS Pavao, Thromb Haemost 2001 86 1215 1220 11816710 (Pubitemid 33064571)
22. Understanding Dermatan Sulfate-Heparin Cofactor II Interaction through Virtual Library Screening. A Raghuraman PD Mosier UR Desai, ACS Med Chem Lett 2010 1 281 285 10.1021/ml100048y 20835364
23. Tubular sprouting as a mode of vascular formation in a colonial ascidian (Tunicata). F Gasparini F Longo L Manni P Burighel G Zaniolo, Dev Dyn 2007 236 719 731 10.1002/dvdy.21073 17256755 (Pubitemid 46449184)
24. Evolution of glycosaminoglycans. S Yamada K Sugahara S zbek, Commun Integr Biol 2011
25. Improved quantitation and discrimination of sulphated glycosaminoglycans by use of dimethylmethylene blue. RW Farndale DJ Buttle AJ Barrett, Biochim Biophys Acta 1986 883 173 177 3091074 (Pubitemid 16027978)
26. Structure and anticoagulant activity of a fucosylated chondroitin sulfate from echinoderm. Sulfated fucose branches on the polysaccharide account for its high anticoagulant action. PA Mourao MS Pereira MS Pavao B Mulloy DM Tollefsen MC Mowinckel U Abildgaard, J Biol Chem 1996 271 23973 23984 10.1074/jbc.271.39. 23973 8798631
27. Formation of anhydrosugars in the chemical depolymerization of heparin. JE Shively HE Conrad, Biochemistry 1976 15 3932 3942 10.1021/bi00663a005 9127
28. A modified uronic acid carbazole reaction. T Bitter HM Muir, Anal Biochem 1962 4 330 334 10.1016/0003-2697(62)90095-7 13971270