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Volumn 12, Issue 1, 2011, Pages

Genome-wide analysis of the mouse lung transcriptome reveals novel molecular gene interaction networks and cell-specific expression signatures

Author keywords

[No Author keywords available]

Indexed keywords

AROMATIC HYDROCARBON RECEPTOR; CYTOCHROME P450 1A1; MESSENGER RNA; TRANSCRIPTOME;

EID: 79955459012     PISSN: 14659921     EISSN: 1465993X     Source Type: Journal    
DOI: 10.1186/1465-9921-12-61     Document Type: Article
Times cited : (22)

References (53)
  • 1
    • 77956895712 scopus 로고    scopus 로고
    • SYSGENET: a meeting report from a new European network for systems genetics
    • Schughart K: SYSGENET: a meeting report from a new European network for systems genetics. Mamm Genome 2010,21(7-8):331-336.
    • (2010) Mamm Genome , vol.21 , Issue.7-8 , pp. 331-336
    • Schughart, K.1
  • 2
    • 56349133939 scopus 로고    scopus 로고
    • Systems genetics can provide new insights in to immune regulation and autoimmunity
    • Morahan G, Peeva V, Mehta M, Williams R: Systems genetics can provide new insights in to immune regulation and autoimmunity. J Autoimmun 2008,31(3):233-236.
    • (2008) J Autoimmun , vol.31 , Issue.3 , pp. 233-236
    • Morahan, G.1    Peeva, V.2    Mehta, M.3    Williams, R.4
  • 3
    • 0036215090 scopus 로고    scopus 로고
    • Genetic dissection of complex and quantitative traits: from fantasy to reality via a community effort
    • Threadgill DW, Hunter KW, Williams RW: Genetic dissection of complex and quantitative traits: from fantasy to reality via a community effort. Mamm Genome 2002,13(4):175-178.
    • (2002) Mamm Genome , vol.13 , Issue.4 , pp. 175-178
    • Threadgill, D.W.1    Hunter, K.W.2    Williams, R.W.3
  • 5
    • 20144386111 scopus 로고    scopus 로고
    • Complex trait analysis of gene expression uncovers polygenic and pleiotropic networks that modulate nervous system function
    • Chesler EJ, Lu L, Shou S, Qu Y, Gu J, Wang J, Hsu HC, Mountz JD, Baldwin NE, Langston MA, et al.: Complex trait analysis of gene expression uncovers polygenic and pleiotropic networks that modulate nervous system function. Nat Genet 2005,37(3):233-242.
    • (2005) Nat Genet , vol.37 , Issue.3 , pp. 233-242
    • Chesler, E.J.1    Lu, L.2    Shou, S.3    Qu, Y.4    Gu, J.5    Wang, J.6    Hsu, H.C.7    Mountz, J.D.8    Baldwin, N.E.9    Langston, M.A.10
  • 6
    • 0035400051 scopus 로고    scopus 로고
    • Genetical genomics: the added value from segregation
    • Jansen RC, Nap JP: Genetical genomics: the added value from segregation. Trends Genet 2001,17(7):388-391.
    • (2001) Trends Genet , vol.17 , Issue.7 , pp. 388-391
    • Jansen, R.C.1    Nap, J.P.2
  • 9
    • 66249117637 scopus 로고    scopus 로고
    • The genetic control of neocortex volume and covariation with neocortical gene expression in mice
    • Gaglani SM, Lu L, Williams RW, Rosen GD: The genetic control of neocortex volume and covariation with neocortical gene expression in mice. BMC Neurosci 2009, 10:44.
    • (2009) BMC Neurosci , vol.10 , pp. 44
    • Gaglani, S.M.1    Lu, L.2    Williams, R.W.3    Rosen, G.D.4
  • 12
  • 13
    • 2142652098 scopus 로고    scopus 로고
    • WebQTL: rapid exploratory analysis of gene expression and genetic networks for brain and behavior
    • Chesler EJ, Lu L, Wang J, Williams RW, Manly KF: WebQTL: rapid exploratory analysis of gene expression and genetic networks for brain and behavior. Nat Neurosci 2004,7(5):485-486.
    • (2004) Nat Neurosci , vol.7 , Issue.5 , pp. 485-486
    • Chesler, E.J.1    Lu, L.2    Wang, J.3    Williams, R.W.4    Manly, K.F.5
  • 15
    • 33646942472 scopus 로고
    • A simple regression method for mapping quantitative trait loci in line crosses using flanking markers
    • Haley CS, Knott SA: A simple regression method for mapping quantitative trait loci in line crosses using flanking markers. Heredity 1992,69(4):315-324.
    • (1992) Heredity , vol.69 , Issue.4 , pp. 315-324
    • Haley, C.S.1    Knott, S.A.2
  • 17
    • 0035233644 scopus 로고    scopus 로고
    • The genetic structure of recombinant inbred mice: high-resolution consensus maps for complex trait analysis
    • RESEARCH0046
    • Williams RW, Gu J, Qi S, Lu L: The genetic structure of recombinant inbred mice: high-resolution consensus maps for complex trait analysis. Genome Biol 2001,2(11):RESEARCH0046.
    • (2001) Genome Biol , vol.2 , Issue.11
    • Williams, R.W.1    Gu, J.2    Qi, S.3    Lu, L.4
  • 21
  • 22
    • 1642576028 scopus 로고    scopus 로고
    • Core 2 branching beta1,6-N-acetylglucosaminyltransferase and high endothelial venule-restricted sul-fotransferase collaboratively control lymphocyte homing
    • Hiraoka N, Kawashima H, Petryniak B, Nakayama J, Mitoma J, Marth JD, Lowe JB, Fukuda M: Core 2 branching beta1,6-N-acetylglucosaminyltransferase and high endothelial venule-restricted sul-fotransferase collaboratively control lymphocyte homing. J Biol Chem 2004,279(4):3058-3067.
    • (2004) J Biol Chem , vol.279 , Issue.4 , pp. 3058-3067
    • Hiraoka, N.1    Kawashima, H.2    Petryniak, B.3    Nakayama, J.4    Mitoma, J.5    Marth, J.D.6    Lowe, J.B.7    Fukuda, M.8
  • 23
    • 0037111372 scopus 로고    scopus 로고
    • Differential regulation of IL-12 and IL-10 gene expression in macrophages by the basic leucine zipper transcription factor c-Maf fibrosarcoma
    • Cao S, Liu J, Chesi M, Bergsagel PL, Ho IC, Donnelly RP, Ma X: Differential regulation of IL-12 and IL-10 gene expression in macrophages by the basic leucine zipper transcription factor c-Maf fibrosarcoma. J Immunol 2002,169(10):5715-5725.
    • (2002) J Immunol , vol.169 , Issue.10 , pp. 5715-5725
    • Cao, S.1    Liu, J.2    Chesi, M.3    Bergsagel, P.L.4    Ho, I.C.5    Donnelly, R.P.6    Ma, X.7
  • 24
    • 14844340837 scopus 로고    scopus 로고
    • The protooncogene c-Maf is an essential transcription factor for IL-10 gene expression in macrophages
    • Cao S, Liu J, Song L, Ma X: The protooncogene c-Maf is an essential transcription factor for IL-10 gene expression in macrophages. J Immunol 2005,174(6):3484-3492.
    • (2005) J Immunol , vol.174 , Issue.6 , pp. 3484-3492
    • Cao, S.1    Liu, J.2    Song, L.3    Ma, X.4
  • 27
    • 69249083836 scopus 로고    scopus 로고
    • Cutting edge: IL-27 induces the transcription factor c-Maf, cytokine IL-21, and the costimulatory recep-tor ICOS that coordinately act together to promote differentiation of IL-10-producing Tr1 cells
    • Pot C, Jin H, Awasthi A, Liu SM, Lai CY, Madan R, Sharpe AH, Karp CL, Miaw SC, Ho IC, et al.: Cutting edge: IL-27 induces the transcription factor c-Maf, cytokine IL-21, and the costimulatory recep-tor ICOS that coordinately act together to promote differentiation of IL-10-producing Tr1 cells. J Immunol 2009,183(2):797-801.
    • (2009) J Immunol , vol.183 , Issue.2 , pp. 797-801
    • Pot, C.1    Jin, H.2    Awasthi, A.3    Liu, S.M.4    Lai, C.Y.5    Madan, R.6    Sharpe, A.H.7    Karp, C.L.8    Miaw, S.C.9    Ho, I.C.10
  • 28
    • 2942618597 scopus 로고    scopus 로고
    • c-Maf and JunB mediation of Th2 differentiation induced by the type 2 G protein-coupled receptor (VPAC2) for vasoactive intestinal peptide
    • Voice J, Donnelly S, Dorsam G, Dolganov G, Paul S, Goetzl EJ: c-Maf and JunB mediation of Th2 differentiation induced by the type 2 G protein-coupled receptor (VPAC2) for vasoactive intestinal peptide. J Immunol 2004,172(12):7289-7296.
    • (2004) J Immunol , vol.172 , Issue.12 , pp. 7289-7296
    • Voice, J.1    Donnelly, S.2    Dorsam, G.3    Dolganov, G.4    Paul, S.5    Goetzl, E.J.6
  • 31
    • 0035999826 scopus 로고    scopus 로고
    • Neuropilin-1: another neuronal molecule in the "immunological synapse"
    • Wulfing C, Rupp F: Neuropilin-1: another neuronal molecule in the "immunological synapse". Nat Immunol 2002,3(5):418-419.
    • (2002) Nat Immunol , vol.3 , Issue.5 , pp. 418-419
    • Wulfing, C.1    Rupp, F.2
  • 32
    • 0346732280 scopus 로고    scopus 로고
    • Expression of a human surfactant protein C mutation associated with interstitial lung disease disrupts lung development in transgenic mice
    • Bridges JP, Wert SE, Nogee LM, Weaver TE: Expression of a human surfactant protein C mutation associated with interstitial lung disease disrupts lung development in transgenic mice. J Biol Chem 2003,278(52):52739-52746.
    • (2003) J Biol Chem , vol.278 , Issue.52 , pp. 52739-52746
    • Bridges, J.P.1    Wert, S.E.2    Nogee, L.M.3    Weaver, T.E.4
  • 36
    • 0036011265 scopus 로고    scopus 로고
    • Expression of high in normal-1 (HIN-1) and uteroglobin related protein-1 (UGRP-1) in adult and developing tissues
    • Porter D, Lahti-Domenici J, Torres-Arzayus M, Chin L, Polyak K: Expression of high in normal-1 (HIN-1) and uteroglobin related protein-1 (UGRP-1) in adult and developing tissues. Mech Dev 2002,114(1-2):201-204.
    • (2002) Mech Dev , vol.114 , Issue.1-2 , pp. 201-204
    • Porter, D.1    Lahti-Domenici, J.2    Torres-Arzayus, M.3    Chin, L.4    Polyak, K.5
  • 37
    • 8644272539 scopus 로고    scopus 로고
    • Decreased expression of uteroglobin-related protein 1 in inflamed mouse airways is mediated by IL-9
    • Chiba Y, Kusakabe T, Kimura S: Decreased expression of uteroglobin-related protein 1 in inflamed mouse airways is mediated by IL-9. Am J Physiol Lung Cell Mol Physiol 2004,287(6):L1193-1198.
    • (2004) Am J Physiol Lung Cell Mol Physiol , vol.287 , Issue.6 , pp. L1193-1198
    • Chiba, Y.1    Kusakabe, T.2    Kimura, S.3
  • 39
    • 0027311265 scopus 로고
    • Cis-active elements controlling lung cell-specific expression of human pulmonary surfactant protein B gene
    • Bohinski RJ, Huffman JA, Whitsett JA, Lattier DL: Cis-active elements controlling lung cell-specific expression of human pulmonary surfactant protein B gene. J Biol Chem 1993,268(15):11160-11166.
    • (1993) J Biol Chem , vol.268 , Issue.15 , pp. 11160-11166
    • Bohinski, R.J.1    Huffman, J.A.2    Whitsett, J.A.3    Lattier, D.L.4
  • 42
    • 1542404518 scopus 로고    scopus 로고
    • Cloning and expression of a mouse member of the PLUNC protein family exclusively expressed in tongue epithe-lium
    • LeClair EE, Nomellini V, Bahena M, Singleton V, Bingle L, Craven CJ, Bingle CD: Cloning and expression of a mouse member of the PLUNC protein family exclusively expressed in tongue epithe-lium. Genomics 2004,83(4):658-666.
    • (2004) Genomics , vol.83 , Issue.4 , pp. 658-666
    • LeClair, E.E.1    Nomellini, V.2    Bahena, M.3    Singleton, V.4    Bingle, L.5    Craven, C.J.6    Bingle, C.D.7
  • 43
    • 0037091061 scopus 로고    scopus 로고
    • PLUNC: a novel family of candidate host defence proteins expressed in the upper airways and nasopharynx
    • Bingle CD, Craven CJ: PLUNC: a novel family of candidate host defence proteins expressed in the upper airways and nasopharynx. Hum Mol Genet 2002,11(8):937-943.
    • (2002) Hum Mol Genet , vol.11 , Issue.8 , pp. 937-943
    • Bingle, C.D.1    Craven, C.J.2
  • 45
    • 0011932755 scopus 로고
    • White sponge nevus of the mucosa (nevus spongiosus albus mucosa)
    • Canon AB: White sponge nevus of the mucosa (nevus spongiosus albus mucosa). Arch Dermatol Syphilol 1935, 31:365-370.
    • (1935) Arch Dermatol Syphilol , vol.31 , pp. 365-370
    • Canon, A.B.1
  • 48
    • 0036779576 scopus 로고    scopus 로고
    • Functional significance of the perforin/granzyme cell death pathway
    • Trapani JA, Smyth MJ: Functional significance of the perforin/granzyme cell death pathway. Nat Rev Immunol 2002,2(10):735-747.
    • (2002) Nat Rev Immunol , vol.2 , Issue.10 , pp. 735-747
    • Trapani, J.A.1    Smyth, M.J.2
  • 49
    • 2642510760 scopus 로고    scopus 로고
    • Role of aryl hydrocarbon receptor-mediated induction of the CYP1 enzymes in environmental toxicity and cancer
    • Nebert DW, Dalton TP, Okey AB, Gonzalez FJ: Role of aryl hydrocarbon receptor-mediated induction of the CYP1 enzymes in environmental toxicity and cancer. J Biol Chem 2004,279(23):23847-23850.
    • (2004) J Biol Chem , vol.279 , Issue.23 , pp. 23847-23850
    • Nebert, D.W.1    Dalton, T.P.2    Okey, A.B.3    Gonzalez, F.J.4
  • 50
    • 0028006520 scopus 로고
    • The Ah receptor: mediator of the toxicity of 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) and related compounds
    • Okey AB, Riddick DS, Harper PA: The Ah receptor: mediator of the toxicity of 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) and related compounds. Toxicol Lett 1994,70(1):1-22.
    • (1994) Toxicol Lett , vol.70 , Issue.1 , pp. 1-22
    • Okey, A.B.1    Riddick, D.S.2    Harper, P.A.3
  • 51
    • 63149122904 scopus 로고    scopus 로고
    • EGF receptor signaling blocks aryl hydrocarbon receptor-mediated transcription and cell differentiation in human epidermal keratinocytes
    • Sutter CH, Yin H, Li Y, Mammen JS, Bodreddigari S, Stevens G, Cole JA, Sutter TR: EGF receptor signaling blocks aryl hydrocarbon receptor-mediated transcription and cell differentiation in human epidermal keratinocytes. Proc Natl Acad Sci USA 2009,106(11):4266-4271.
    • (2009) Proc Natl Acad Sci USA , vol.106 , Issue.11 , pp. 4266-4271
    • Sutter, C.H.1    Yin, H.2    Li, Y.3    Mammen, J.S.4    Bodreddigari, S.5    Stevens, G.6    Cole, J.A.7    Sutter, T.R.8
  • 52
    • 0024462025 scopus 로고
    • Protein-DNA interactions at recognition sites for the dioxin-Ah receptor complex
    • Denison MS, Fisher JM, Whitlock JP Jr: Protein-DNA interactions at recognition sites for the dioxin-Ah receptor complex. J Biol Chem 1989,264(28):16478-16482.
    • (1989) J Biol Chem , vol.264 , Issue.28 , pp. 16478-16482
    • Denison, M.S.1    Fisher, J.M.2    Whitlock, J.P.3
  • 53
    • 0027762492 scopus 로고
    • Ten nucleotide differences, five of which cause amino acid changes, are associated with the Ah receptor locus polymorphism of C57BL/6 and DBA/2 mice
    • Chang C, Smith DR, Prasad VS, Sidman CL, Nebert DW, Puga A: Ten nucleotide differences, five of which cause amino acid changes, are associated with the Ah receptor locus polymorphism of C57BL/6 and DBA/2 mice. Pharmacogenetics 1993,3(6):312-321.
    • (1993) Pharmacogenetics , vol.3 , Issue.6 , pp. 312-321
    • Chang, C.1    Smith, D.R.2    Prasad, V.S.3    Sidman, C.L.4    Nebert, D.W.5    Puga, A.6


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