Fungal community composition and function after long-term exposure of northern forests to elevated atmospheric CO2 and tropospheric O3

Global Change Biology

Volumn 17, Issue 6, 2011, Pages 2184-2195

  Edwards, Ivan P ^a   Zak, Donald R ^a  

^a UNIVERSITY OF MICHIGAN   (United States)

Author keywords

Elevated carbon dioxide; Elevated ozone; Enzyme activities; FACE; Fungal communities; Long term

Indexed keywords

ANGIOSPERM; CARBON DIOXIDE; COMMUNITY COMPOSITION; DOMINANCE; ECOSYSTEM FUNCTION; ENZYME ACTIVITY; FOREST ECOSYSTEM; FUNGUS; GENOTYPE; OZONE; TIME SERIES ANALYSIS; TROPOSPHERE;

FUNGI; INOCYBE; LACCARIA; SISTOTREMA; TOMENTELLA;

EID: 79955023066     PISSN: 13541013     EISSN: 13652486     Source Type: Journal    
DOI: 10.1111/j.1365-2486.2010.02376.x     Document Type: Article

References (51)

1. Andersen CP (2003) Source-sink balance and carbon allocation below ground in plants exposed to ozone. New Phytologist, 157, 213-228.
2. 3. Ecology Letters, 12, 1-10.
3. 3. Oecologia, 147, 143-154.
4. Colwell RK (2009) EstimateS: Statistical estimation of species richness and shared species from samples. Version 8.2. User's Guide and application. Available at: (accessed 15 August 2010).
5. 2 reduces field decomposition rates of Betula pendula (Roth.) leaf litter. Oecologia, 106, 525-530.
6. 2 enrichment. Science, 284, 1177-1179.
7. Dickson RE, Lewin KF, Isebrands JG et al. (2000) General Technical Report NC-214. USDA Forest Service North Central Experiment Station.
8. Edwards IP, Zak DR (2010) Phylogenetic similarity and structure of Agaricomycotina communities across a forested landscape. Molecular Ecology, 19, 1469-1482.
9. Finlayson-Pitts BJ, Pitts JN Jr (1997) Tropospheric air pollution: ozone, airborne toxic, polycyclic aromatics and particles. Science, 276, 1045-1052.
10. Frankland FC (1998) Fungal succession - unraveling the unpredictable. Mycological Research, 102, 1-15.
11. 2 alters root symbiont community structure in forest trees. New Phytologist, 152, 431-442.
12. 2. New Phytologist, 137, 433-440.
13. 2]. New Phytologist, 146, 163-168.
14. Grebenc T, Kraigher H (2007) Changes in the community of ectomycorrhizal fungi and increased fine root number under adult beech trees chronically fumigated with double ambient ozone concentration. Plant Biology, 9, 279-287.
15. 2 increases the long-term decomposition rate of Quercus myrtifolia leaf litter. Global Change Biology, 12, 568-577.
16. Hibbett DS (2006) A Phylogenetic overview of the Agaricomycotina. Mycologia, 98, 917-925.
17. Hopple J, Vilgalys R (1994) Phylogenetic relationships among coprinoid taxa and allies based on data from restriction site mapping of nuclear rDNA. Mycologia, 86, 96-107.
18. IPCC (2007) Changes in atmospheric constituents and in radioactive forcing. In: Climate Change 2007: The Physical Science Basis. Contribution of Working Group I to the Fourth Assessment Report of the Intergovernmental Panel on Climate Change (eds Solomon S, Qin D, Manning M, Chen Z, Marquis M, Averyt KB, Tignor M, Miller HL), Cambridge University Press, Cambridge, UK.
19. Kang H, Freeman C, Park SS, Chun J (2005) N-Acetylglucosaminidase activities in wetlands: a global survey. Hydrobiologia, 532, 103-110.
20. 2. Canadian Journal of Forest Research, 26, 639-648.
21. 2 a synthesis of molecular to ecosystem results from the Aspen FACE project. Functional Ecology, 17, 289-304.
22. 3 on fine roots and mycorrhizas of naturally growing young Scots pine trees during three exposure years. Global Change Biology, 5, 771-780.
23. 3 levels during three growing seasons. Global Change Biology, 11, 1167-1179.
24. Katoh K, Misawa K, Kuma K-I, Miyata T (2002) MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Research, 30, 3059-3066.
25. 2. New Phytologist, 168, 623-636.
26. 2 and soil N availability. New Phytologist, 140, 251-260.
27. 3. Soil Science Society of America Journal, 66, 1848-1856.
28. Lindahl BO, Ihrmark K, Boberg J et al. (2007) Spatial separation of litter decomposition and mycorrhizal nitrogen uptake in a boreal forest. New Phytologist, 173, 611-620.
29. Lindroth RL, Kopper BJ, Parsons WFJ et al. (2001) Consequences of elevated carbon dioxide and ozone for foliar chemical composition and dynamics in trembling aspen (Populus tremuloides) and Betula papyrifera. Environmental Pollution, 115, 395-404.
30. 3 on leaf litter production and chemistry in trembling aspen and paper birch communities. Tree Physiology, 25, 1511-1522.
31. Lodge DJ, Cantrell S (1995) Fungal communities in wet tropical forests: variation in time and space. Canadian Journal of Botany, 73 (Suppl. 1), S1391-S1398.
32. Lozupone C, Knight R (2005) UniFrac: a new phylogenetic method for comparing microbial communities. Applied and Environmental Microbiology, 71, 8228-8235.
33. Manly BFJ (1991) Randomization and Monte Carlo Methods in Biology. Chapman & Hall, London.
34. Martin KJ, Rygiewicz PT (2005) Fungal-specific PCR primers developed for analysis of the ITS region of environmental DNA extracts. BMC Microbiology, 5, 28.
35. Miller MA, Holder MT, Vos R et al. The CIPRES Portals. CIPRES. Available at (accessed 4 August 2009).
36. O'Brien HE, Parrent JL, Jackson JA, Monclavo J-M, Vilgalys R (2005) Fungal community analysis by large-scale sequencing of environmental samples. Applied and Environmental Microbiology, 71, 5540-5550.
37. 2-enrichment and nutrient availability alter ectomycorrhizal fungal communities. Ecology, 87, 2278-2287.
38. 2 and nitrogen fertilization. New Phytologist, 176, 164-174.
39. 3. Global Change Biology, 10, 1666-1677.
40. 2: a search for functional types. In: Carbon dioxide, Populations, and Communities (eds Korner C, Bazzaz FA), pp. 375-412. Academic Press Inc., London, UK.
41. 3. New Phytologist, 180, 153-161.
42. Saiya-Cork KR, Sinsabaugh RL, Zak DR (2002) The effects of long term nitrogen deposition on extracellular enzyme activity in an Acer saccharum forest soil. Soil Biology and Biochemistry, 34, 1309-1315.
43. Schloss PD, Handelsman J (2005) Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness. Applied and Environmental Microbiology, 71, 1501-1506.
44. Spatafora JW, Johnson D, Sung G-H et al. (2006) A five-gene phylogenetic analysis of the Pezizomycotina. Mycologia, 98, 1020-1030.
45. Stamatakis A, Ludwig T, Meier H (2005) RAxML-III: a fast program for maximum likelihood-based inference of large phylogenetic trees. Bioinformatics, 21, 456-463.
46. 2 concentration. Folia Microbiologica, 49, 563-568.
47. Talhelm AF, Pregitzer KS, Zak DR (2009) Species-specific responses to atmospheric carbon dioxide and tropospheric ozone mediate changes in soil carbon. Ecology Letters, 12, 1-10.
48. Tamura K, Dudley J, Nei M, Kumar S (2007) MEGA4: molecular evolutionary genetics analysis (MEGA) Software Version 4.0. Molecular Biology and Evolution, 24, 1596-1599.
49. Ter Braak CJF (1987) The analysis of vegetation-environment relationships by canonical correspondence analysis. Vegetatio, 69, 69-77.
50. 2 in field studies. New Phytologist, 164, 347-355.
51. 3. Global Change Biology, 13, 2230-2238.