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Volumn 25, Issue 4, 2011, Pages 1378-1389

A dual epigenomic approach for the search of obesity biomarkers: DNA methylation in relation to diet-induced weight loss

Author keywords

ATP10A; CD44; Microarray; PBMC; WT1

Indexed keywords

ADENOSINE TRIPHOSPHATASE; ADENOSINE TRIPHOSPHATASE CLASS V TYPE 10A; ADIPONECTIN; BIOLOGICAL MARKER; BISULFITE; CHOLESTEROL; DNA; GHRELIN; HERMES ANTIGEN; HIGH DENSITY LIPOPROTEIN CHOLESTEROL; INTERLEUKIN 6; LEPTIN; LOW DENSITY LIPOPROTEIN CHOLESTEROL; MALONALDEHYDE; TRIACYLGLYCEROL; TUMOR NECROSIS FACTOR ALPHA; UNCLASSIFIED DRUG; WT1 PROTEIN;

EID: 79954611176     PISSN: 08926638     EISSN: 15306860     Source Type: Journal    
DOI: 10.1096/fj.10-170365     Document Type: Article
Times cited : (193)

References (50)
  • 1
    • 69149092291 scopus 로고    scopus 로고
    • Is enhanced energy utilization the answer to prevention of excessive adiposity?
    • Redinger, R. N. (2009) Is enhanced energy utilization the answer to prevention of excessive adiposity? J. Ky. Med. Assoc. 107, 211-217
    • (2009) J. Ky. Med. Assoc. , vol.107 , pp. 211-217
    • Redinger, R.N.1
  • 2
    • 38949187953 scopus 로고    scopus 로고
    • Evidence for a strong genetic influence on childhood adiposity despite the force of the obesogenic environment
    • Wardle, J., Carnell, S., Haworth, C. M., and Plomin, R. (2008) Evidence for a strong genetic influence on childhood adiposity despite the force of the obesogenic environment. Am. J. Clin. Nutr. 87, 398-404 (Pubitemid 351226077)
    • (2008) American Journal of Clinical Nutrition , vol.87 , Issue.2 , pp. 398-404
    • Wardle, J.1    Carnell, S.2    Haworth, C.M.A.3    Plomin, R.4
  • 7
    • 30544453973 scopus 로고    scopus 로고
    • Is the insulin resistance syndrome the price to be paid to achieve body weight stability?
    • DOI 10.1038/sj.ijo.0803019, PII 0803019
    • Tremblay, A., Boule, N., Doucet, E., and Woods, S. C. (2005) Is the insulin resistance syndrome the price to be paid to achieve body weight stability? Int. J. Obes. (Lond.) 29, 1295-1298 (Pubitemid 43080311)
    • (2005) International Journal of Obesity , vol.29 , Issue.10 , pp. 1295-1298
    • Tremblay, A.1    Boule, N.2    Doucet, E.3    Woods, S.C.4
  • 9
    • 75649087405 scopus 로고    scopus 로고
    • Differential epigenomic and transcriptomic responses in subcutaneous adipose tissue between low and high responders to caloric restriction
    • Bouchard, L., Rabasa-Lhoret, R., Faraj, M., Lavoie, M. E., Mill, J., Perusse, L., and Vohl, M. C. (2010) Differential epigenomic and transcriptomic responses in subcutaneous adipose tissue between low and high responders to caloric restriction. Am. J. Clin. Nutr. 91, 309-320
    • (2010) Am. J. Clin. Nutr. , vol.91 , pp. 309-320
    • Bouchard, L.1    Rabasa-Lhoret, R.2    Faraj, M.3    Lavoie, M.E.4    Mill, J.5    Perusse, L.6    Vohl, M.C.7
  • 10
    • 67650466971 scopus 로고    scopus 로고
    • TNF-alpha promoter methylation as a predictive biomarker for weight-loss response
    • Campion, J., Milagro, F. I., Goyenechea, E., and Martinez, J. A. (2009) TNF-alpha promoter methylation as a predictive biomarker for weight-loss response. Obesity 17, 1293-1297
    • (2009) Obesity , vol.17 , pp. 1293-1297
    • Campion, J.1    Milagro, F.I.2    Goyenechea, E.3    Martinez, J.A.4
  • 11
    • 67651152853 scopus 로고    scopus 로고
    • Individuality and epigenetics in obesity
    • Campion, J., Milagro, F. I., and Martinez, J. A. (2009) Individuality and epigenetics in obesity. Obes. Rev. 10, 383-392
    • (2009) Obes. Rev. , vol.10 , pp. 383-392
    • Campion, J.1    Milagro, F.I.2    Martinez, J.A.3
  • 12
    • 58149497235 scopus 로고    scopus 로고
    • Developmental and epigenetic pathways to obesity: An evolutionary- developmental perspective
    • Gluckman, P. D., and Hanson, M. A. (2008) Developmental and epigenetic pathways to obesity: an evolutionary-developmental perspective. Int. J. Obes. (Lond.) 32 (Suppl. 7), S62-S71
    • (2008) Int. J. Obes. (Lond.) , vol.32 , Issue.7 SUPPL.
    • Gluckman, P.D.1    Hanson, M.A.2
  • 14
    • 33947611552 scopus 로고    scopus 로고
    • Nutri-epigenomics: Lifelong remodelling of our epigenomes by nutritional and metabolic factors and beyond
    • DOI 10.1515/CCLM.2007.081
    • Gallou-Kabani, C., Vige, A., Gross, M. S., and Junien, C. (2007) Nutri-epigenomics: lifelong remodelling of our epigenomes by nutritional and metabolic factors and beyond. Clin. Chem. Lab. Med. 45, 321-327 (Pubitemid 46480913)
    • (2007) Clinical Chemistry and Laboratory Medicine , vol.45 , Issue.3 , pp. 321-327
    • Gallou-Kabani, C.1    Vige, A.2    Gross, M.-S.3    Junien, C.4
  • 15
    • 0031000977 scopus 로고    scopus 로고
    • Influence of oxygen radical injury on DNA methylation
    • DOI 10.1016/S1383-5742(96)00050-6, PII S1383574296000504
    • Cerda, S., and Weitzman, S. A. (1997) Influence of oxygen radical injury on DNA methylation. Mutat. Res. 386, 141-152 (Pubitemid 27195019)
    • (1997) Mutation Research - Reviews in Mutation Research , vol.386 , Issue.2 , pp. 141-152
    • Cerda, S.1    Weitzman, S.A.2
  • 16
    • 55949129628 scopus 로고    scopus 로고
    • Inflammatory signalling as mediator of epigenetic modulation in tissuespecific chronic inflammation
    • Backdahl, L., Bushell, A., and Beck, S. (2009) Inflammatory signalling as mediator of epigenetic modulation in tissuespecific chronic inflammation. Int. J. Biochem. Cell Biol. 41, 176-184
    • (2009) Int. J. Biochem. Cell. Biol. , vol.41 , pp. 176-184
    • Backdahl, L.1    Bushell, A.2    Beck, S.3
  • 19
    • 69249235740 scopus 로고    scopus 로고
    • Calorie restriction and the exercise of chromatin
    • Vaquero, A., and Reinberg, D. (2009) Calorie restriction and the exercise of chromatin. Genes Dev. 23, 1849-1869
    • (2009) Genes Dev. , vol.23 , pp. 1849-1869
    • Vaquero, A.1    Reinberg, D.2
  • 20
    • 77649337965 scopus 로고    scopus 로고
    • Experimental approaches to the study of epigenomic dysregulation in ageing
    • Thompson, R. F., Fazzari, M. J., and Greally, J. M. (2010) Experimental approaches to the study of epigenomic dysregulation in ageing. Exp. Gerontol. 45, 255-268
    • (2010) Exp. Gerontol. , vol.45 , pp. 255-268
    • Thompson, R.F.1    Fazzari, M.J.2    Greally, J.M.3
  • 21
    • 34247860920 scopus 로고    scopus 로고
    • Mechanisms of Disease: Methyl-binding domain proteins as potential therapeutic targets in cancer
    • DOI 10.1038/ncponc0812, PII NCPONC0812
    • Sansom, O. J., Maddison, K., and Clarke, A. R. (2007) Mechanisms of disease: methyl-binding domain proteins as potential therapeutic targets in cancer Nat. Clin. Pract. Oncol. 4, 305-315 (Pubitemid 46758788)
    • (2007) Nature Clinical Practice Oncology , vol.4 , Issue.5 , pp. 305-315
    • Sansom, O.J.1    Maddison, K.2    Clarke, A.R.3
  • 22
    • 57149109884 scopus 로고    scopus 로고
    • Differential expression of oxidative stress and inflammation related genes in peripheral blood mononuclear cells in response to a low-calorie diet: A nutrigenomics study
    • DOI 10.1089/omi.2008.0001
    • Crujeiras, A. B., Parra, D., Milagro, F. I., Goyenechea, E., Larrarte, E., Margareto, J., and Martinez, J. A. (2008) Differential expression of oxidative stress and inflammation related genes in peripheral blood mononuclear cells in response to a low-calorie diet: a nutrigenomics study. Omics 12, 251-261 (Pubitemid 352773935)
    • (2008) OMICS A Journal of Integrative Biology , vol.12 , Issue.4 , pp. 251-261
    • Crujeiras, A.B.1    Parra, D.2    Milagro, F.I.3    Goyenechea, E.4    Larrarte, E.5    Margareto, J.6    Martinez, J.A.7
  • 23
    • 64949107091 scopus 로고    scopus 로고
    • Legume-, fish-, or high-protein-based hypocaloric diets: Effects on weight loss and mitochondrial oxidation in obese men
    • Abete, I., Parra, D., and Martinez, J. A. (2009) Legume-, fish-, or high-protein-based hypocaloric diets: effects on weight loss and mitochondrial oxidation in obese men. J. Med. Food 12, 100-108
    • (2009) J. Med. Food , vol.12 , pp. 100-108
    • Abete, I.1    Parra, D.2    Martinez, J.A.3
  • 24
    • 56149099194 scopus 로고    scopus 로고
    • Specific insulin sensitivity and leptin responses to a nutritional treatment of obesity via a combination of energy restriction and fatty fish intake
    • Abete, I., Parra, D., Crujeiras, A. B., Goyenechea, E., and Martinez, J. A. (2008) Specific insulin sensitivity and leptin responses to a nutritional treatment of obesity via a combination of energy restriction and fatty fish intake. J. Hum. Nutr. Diet 21, 591-600
    • (2008) J. Hum. Nutr. Diet. , vol.21 , pp. 591-600
    • Abete, I.1    Parra, D.2    Crujeiras, A.B.3    Goyenechea, E.4    Martinez, J.A.5
  • 25
    • 76249107254 scopus 로고    scopus 로고
    • DNA methylation pattern changes upon long-term culture and aging of human mesenchymal stromal cells
    • Bork, S., Pfister, S., Witt, H., Horn, P., Korn, B., Ho, A. D., and Wagner, W. (2010) DNA methylation pattern changes upon long-term culture and aging of human mesenchymal stromal cells. Aging Cell 9, 54-63
    • (2010) Aging Cell. , vol.9 , pp. 54-63
    • Bork, S.1    Pfister, S.2    Witt, H.3    Horn, P.4    Korn, B.5    Ho, A.D.6    Wagner, W.7
  • 26
    • 69949164229 scopus 로고    scopus 로고
    • A pipeline for the quantitative analysis of CG dinucleotide methylation using mass spectrometry
    • Thompson, R. F., Suzuki, M., Lau, K. W., and Greally, J. M. (2009) A pipeline for the quantitative analysis of CG dinucleotide methylation using mass spectrometry. Bioinformatics 25, 2164-2170
    • (2009) Bioinformatics , vol.25 , pp. 2164-2170
    • Thompson, R.F.1    Suzuki, M.2    Lau, K.W.3    Greally, J.M.4
  • 27
    • 0001677717 scopus 로고
    • Controlling the false discovery rate: A practical and powerful approach to multiple testing
    • Benjamini, Y., and Hochberg, Y. (1995) Controlling the false discovery rate: A practical and powerful approach to multiple testing. J. R. Stat. Soc. B 57, 289-300
    • (1995) J. R. Stat. Soc. B. , vol.57 , pp. 289-300
    • Benjamini, Y.1    Hochberg, Y.2
  • 28
    • 84926104532 scopus 로고    scopus 로고
    • Nutrigenetics: A tool to provide personalized nutritional therapy to the obese
    • Marti, A., Goyenechea, E., and Martinez, J. A. (2010) Nutrigenetics: a tool to provide personalized nutritional therapy to the obese. World Rev. Nutr. Diet 101, 21-33
    • (2010) World Rev. Nutr. Diet. , vol.101 , pp. 21-33
    • Marti, A.1    Goyenechea, E.2    Martinez, J.A.3
  • 29
    • 70449730697 scopus 로고    scopus 로고
    • MicroRNAs as novel myocardial biomarkers
    • Margulies, K. B. (2009) MicroRNAs as novel myocardial biomarkers. Clin. Chem. 55, 1897-1899
    • (2009) Clin. Chem. , vol.55 , pp. 1897-1899
    • Margulies, K.B.1
  • 31
    • 78651326777 scopus 로고    scopus 로고
    • Epigenetic changes in early life and future risk of obesity. [E-pub ahead of print] Int
    • doi: 10.1038/ijo.2010.122
    • Lillycrop, K. A., and Burdge, G. C. (2010) Epigenetic changes in early life and future risk of obesity. [E-pub ahead of print] Int. J. Obes. (Lond.) doi: 10.1038/ijo.2010.122
    • (2010) J. Obes. (Lond.)
    • Lillycrop, K.A.1    Burdge, G.C.2
  • 32
  • 36
    • 0036634090 scopus 로고    scopus 로고
    • An aminophospholipid translocase associated with body fat and type 2 diabetes phenotypes
    • Dhar, M., Hauser, L., and Johnson, D. (2002) An aminophospholipid translocase associated with body fat and type 2 diabetes phenotypes. Obes. Res. 10, 695-702 (Pubitemid 135688270)
    • (2002) Obesity Research , vol.10 , Issue.7 , pp. 695-702
    • Dhar, M.1    Hauser, L.2    Johnson, D.3
  • 37
    • 77954657726 scopus 로고    scopus 로고
    • Atp10a, a gene adjacent to the PWS/AS gene cluster, is not imprinted in mouse and is insensitive to the PWS-IC
    • DuBose, A. J., Johnstone, K. A., Smith, E. Y., Hallett, R. A., and Resnick, J. L. (2010) Atp10a, a gene adjacent to the PWS/AS gene cluster, is not imprinted in mouse and is insensitive to the PWS-IC. Neurogenetics 11, 145-151
    • (2010) Neurogenetics , vol.11 , pp. 145-151
    • DuBose, A.J.1    Johnstone, K.A.2    Smith, E.Y.3    Hallett, R.A.4    Resnick, J.L.5
  • 38
    • 1842478372 scopus 로고    scopus 로고
    • Mice Heterozygous for Atp10c, A Putative Amphipath, Represent A Novel Model of Obesity and Type 2 Diabetes
    • Dhar, M. S., Sommardahl, C. S., Kirkland, T., Nelson, S., Donnell, R., Johnson, D. K., and Castellani, L. W. (2004) Mice heterozygous for Atp10c, a putative amphipath, represent a novel model of obesity and type 2 diabetes. J. Nutr. 134, 799-805 (Pubitemid 38456246)
    • (2004) Journal of Nutrition , vol.134 , Issue.4 , pp. 799-805
    • Dhar, M.S.1    Sommardahl, C.S.2    Kirkland, T.3    Nelson, S.4    Donnell, R.5    Johnson, D.K.6    Castellani, L.W.7
  • 39
    • 66349089524 scopus 로고    scopus 로고
    • Genome-scale network analysis of imprinted human metabolic genes
    • Sigurdsson, M. I., Jamshidi, N., Jonsson, J. J., and Palsson, B. O. (2009) Genome-scale network analysis of imprinted human metabolic genes. Epigenetics 4, 43-46
    • (2009) Epigenetics , vol.4 , pp. 43-46
    • Sigurdsson, M.I.1    Jamshidi, N.2    Jonsson, J.J.3    Palsson, B.O.4
  • 42
    • 34247579714 scopus 로고    scopus 로고
    • A tumor suppressor and oncogene: The WT1 story
    • DOI 10.1038/sj.leu.2404624, PII 2404624
    • Yang, L., Han, Y., Suarez Saiz, F., and Minden, M. D. (2007) A tumor suppressor and oncogene: the WT1 story. Leukemia 21, 868-876 (Pubitemid 46672061)
    • (2007) Leukemia , vol.21 , Issue.5 , pp. 868-876
    • Yang, L.1    Han, Y.2    Saurez Saiz, F.3    Minden, M.D.4
  • 43
    • 2942597447 scopus 로고    scopus 로고
    • WT1 gene expression: An excellent tool for monitoring minimal residual disease in 70% of acute myeloid leukaemia patients - Results from a single-centre study
    • DOI 10.1111/j.1365-2141.2004.04952.x
    • Ostergaard, M., Olesen, L. H., Hasle, H., Kjeldsen, E., and Hokland, P. (2004) WT1 gene expression: an excellent tool for monitoring minimal residual disease in 70% of acute myeloid leukaemia patients - results from a single-centre study. Br. J. Haematol. 125, 590-600 (Pubitemid 38747961)
    • (2004) British Journal of Haematology , vol.125 , Issue.5 , pp. 590-600
    • Ostergaard, M.1    Olesen, L.H.2    Hasle, H.3    Kjeldsen, E.4    Hokland, P.5
  • 44
    • 77951743757 scopus 로고    scopus 로고
    • Chronic administration of brain-derived neurotrophic factor in the hypothalamic paraventricular nucleus reverses obesity induced by high fat diet
    • Wang, C., Godar, R., Billington, C., and Kotz, C. M. (2010) Chronic administration of brain-derived neurotrophic factor in the hypothalamic paraventricular nucleus reverses obesity induced by high fat diet. Am. J. Physiol. Regul. Integr. Comp. Physiol. 298, R1320-R1332
    • (2010) Am. J. Physiol. Regul. Integr. Comp. Physiol. , vol.298
    • Wang, C.1    Godar, R.2    Billington, C.3    Kotz, C.M.4
  • 45
    • 77952243631 scopus 로고    scopus 로고
    • Brain-derived neurotrophic factor (BDNF) in the hypothalamic ventromedial nucleus increases energy expenditure
    • Wang, C., Bomberg, E., Billington, C. J., Levine, A. S., and Kotz, C. M. (2010) Brain-derived neurotrophic factor (BDNF) in the hypothalamic ventromedial nucleus increases energy expenditure. Brain Res. 1336, 66-77
    • (2010) Brain Res. , vol.1336 , pp. 66-77
    • Wang, C.1    Bomberg, E.2    Billington, C.J.3    Levine, A.S.4    Kotz, C.M.5
  • 46
    • 33644665922 scopus 로고    scopus 로고
    • WAGR syndrome: A clinical review of 54 cases
    • DOI 10.1542/peds.2004-0467
    • Fischbach, B. V., Trout, K. L., Lewis, J., Luis, C. A., and Sika, M. (2005) WAGR syndrome: a clinical review of 54 cases. Pediatrics 116, 984-988 (Pubitemid 44542829)
    • (2005) Pediatrics , vol.116 , Issue.4 , pp. 984-988
    • Fischbach, B.V.1    Trout, K.L.2    Lewis, J.3    Luis, C.A.4    Sika, M.5
  • 50
    • 77957230254 scopus 로고    scopus 로고
    • Weight gain induced by an isocaloric pair-fed high fat diet: A nutriepigenetic study on FASN and NDUFB6 gene promoters
    • Lomba, A., Martinez, J. A., Garcia-Diaz, D. F., Paternain, L., Marti, A., Campion, J., and Milagro, F. I. (2010) Weight gain induced by an isocaloric pair-fed high fat diet: a nutriepigenetic study on FASN and NDUFB6 gene promoters. Mol. Genet. Metab. 101, 273-278
    • (2010) Mol. Genet. Metab. , vol.101 , pp. 273-278
    • Lomba, A.1    Martinez, J.A.2    Garcia-Diaz, D.F.3    Paternain, L.4    Marti, A.5    Campion, J.6    Milagro, F.I.7


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