메뉴 건너뛰기




Volumn 28, Issue 2, 2011, Pages 123-130

The new fioreDB database provides comprehensive information on plant transcription factors and phenotypes induced by CRES-T in ornamental and model plants

(29)  Mitsuda, Nobutaka a   Takiguchi, Yuko a   Shikata, Masahito b   Sage Ono, Kimiyo c   Ono, Michiyuki c   Sasaki, Katsutomo b   Yamaguchi, Hiroyasu b   Narumi, Takako h   Tanaka, Yuri d   Sugiyama, Masao d   Yamamura, Tomomichi d   Terakawa, Teruhiko d   Gion, Keiko e   Suzuri, Ryota e   Tanaka, Yoshikazu e   Nakatsuka, Takashi f   Kimura, Souichi f   Nishihara, Masahiro f   Sakai, Tomoyuki g   Endo Onodera, Reiko g   more..

d Atsugi *  (Japan)

Author keywords

Chimeric repressor gene silencing technology (cres t); Database; Fioredb; Flower; Srdx; Transcription factor

Indexed keywords

ARABIDOPSIS; CHRYSANTHEMUM; CYCLAMEN; GENTIANA; IPOMOEA; TORENIA;

EID: 79954567236     PISSN: 13424580     EISSN: 13476114     Source Type: Journal    
DOI: 10.5511/plantbiotechnology.11.0106a     Document Type: Article
Times cited : (24)

References (43)
  • 4
    • 0347492019 scopus 로고    scopus 로고
    • AGRIS: Arabidopsis gene regulatory information server, an information resource of Arabidopsis cis-regulatory elements and transcription factors
    • Davuluri RV, Sun H, Palaniswamy SK, Matthews N, Molina C, Kurtz M, Grotewold E (2003) AGRIS: Arabidopsis gene regulatory information server, an information resource of Arabidopsis cis-regulatory elements and transcription factors. BMC Bioinformatics 4: 25-25
    • (2003) BMC Bioinformatics , vol.4 , pp. 25
    • Davuluri, R.V.1    Sun, H.2    Palaniswamy, S.K.3    Matthews, N.4    Molina, C.5    Kurtz, M.6    Grotewold, E.7
  • 5
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein J (1985) Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39: 783-791
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 8
  • 9
    • 0038806468 scopus 로고    scopus 로고
    • Dominant repression of target genes by chimeric repressors that include the EAR motif, a repression domain, in Arabidopsis
    • Hiratsu K, Matsui K, Koyama T, Ohme-Takagi M (2003) Dominant repression of target genes by chimeric repressors that include the EAR motif, a repression domain, in Arabidopsis. Plant J 34: 733-739
    • (2003) Plant J , vol.34 , pp. 733-739
    • Hiratsu, K.1    Matsui, K.2    Koyama, T.3    Ohme-Takagi, M.4
  • 10
    • 3543007738 scopus 로고    scopus 로고
    • Identification of the minimal repression domain of SUPERMAN shows that the DLELRL hexapeptide is both necessary and sufficient for repression of transcription in Arabidopsis
    • Hiratsu K, Mitsuda N, Matsui K, Ohme-Takagi M (2004) Identification of the minimal repression domain of SUPERMAN shows that the DLELRL hexapeptide is both necessary and sufficient for repression of transcription in Arabidopsis. Biochem Biophys Res Comm 321: 172-178
    • (2004) Biochem Biophys Res Comm , vol.321 , pp. 172-178
    • Hiratsu, K.1    Mitsuda, N.2    Matsui, K.3    Ohme-Takagi, M.4
  • 12
    • 73249153024 scopus 로고    scopus 로고
    • Arabidopsis WUSCHEL is a bifunctional transcription factor that acts as a repressor in stem cell regulation and as an activator in floral patterning
    • Ikeda M, Mitsuda N, Ohme-Takagi M (2009) Arabidopsis WUSCHEL is a bifunctional transcription factor that acts as a repressor in stem cell regulation and as an activator in floral patterning. Plant Cell 21: 3493-3505
    • (2009) Plant Cell , vol.21 , pp. 3493-3505
    • Ikeda, M.1    Mitsuda, N.2    Ohme-Takagi, M.3
  • 13
    • 66149083210 scopus 로고    scopus 로고
    • A novel group of transcriptional repressors in Arabidopsis
    • Ikeda M, Ohme-Takagi M (2009) A novel group of transcriptional repressors in Arabidopsis. Plant Cell Physiol 50: 970-975
    • (2009) Plant Cell Physiol , vol.50 , pp. 970-975
    • Ikeda, M.1    Ohme-Takagi, M.2
  • 15
    • 0037100671 scopus 로고    scopus 로고
    • MAFFT: A novel method for rapid multiple sequence alignment based on fast fourier transform
    • Katoh K, Misawa K, Kuma K, Miyata T (2002) MAFFT: a novel method for rapid multiple sequence alignment based on fast fourier transform. Nucleic Acids Res 30: 3059-3066
    • (2002) Nucleic Acids Res , vol.30 , pp. 3059-3066
    • Katoh, K.1    Misawa, K.2    Kuma, K.3    Miyata, T.4
  • 16
    • 45949107473 scopus 로고    scopus 로고
    • Recent developments in the MAFFT multiple sequence alignment program
    • Katoh K, Toh H (2008) Recent developments in the MAFFT multiple sequence alignment program. Brief Bioinform 9: 286-298
    • (2008) Brief Bioinform , vol.9 , pp. 286-298
    • Katoh, K.1    Toh, H.2
  • 17
    • 34247200577 scopus 로고    scopus 로고
    • The atGenExpress global stress expression data set: Protocols, evaluation and model data analysis of UV-B light, drought and cold stress responses
    • Kilian J, Whitehead D, Horak J, Wanke D, Weinl S, Batistic O D'Angelo C, Bornberg-Bauer E, Kudla J, Harter K (2007) The atGenExpress global stress expression data set: protocols, evaluation and model data analysis of UV-B light, drought and cold stress responses. Plant J 50: 347-363
    • (2007) Plant J , vol.50 , pp. 347-363
    • Kilian, J.1    Whitehead, D.2    Horak, J.3    Wanke, D.4    Weinl, S.5    Batistic, O.D.C.6    Bornberg-Bauer, E.7    Kudla, J.8    Harter, K.9
  • 19
    • 51249110324 scopus 로고    scopus 로고
    • AtMYBL2, a protein with a single MYB domain, acts as a negative regulator of anthocyanin biosynthesis in Arabidopsis
    • Matsui K, Umemura Y, Ohme-Takagi M (2008) AtMYBL2, a protein with a single MYB domain, acts as a negative regulator of anthocyanin biosynthesis in Arabidopsis. Plant J 55: 954-967
    • (2008) Plant J , vol.55 , pp. 954-967
    • Matsui, K.1    Umemura, Y.2    Ohme-Takagi, M.3
  • 21
    • 75549089193 scopus 로고    scopus 로고
    • SALAD database: A motif-based database of protein annotations for plant comparative genomics
    • Mihara M, Itoh T, Izawa T (2010) SALAD database: a motif-based database of protein annotations for plant comparative genomics. Nucleic Acids Res 38: D835-D842
    • (2010) Nucleic Acids Res , vol.38
    • Mihara, M.1    Itoh, T.2    Izawa, T.3
  • 24
    • 67651113970 scopus 로고    scopus 로고
    • Functional analysis of transcription factors in Arabidopsis
    • Mitsuda N, Ohme-Takagi M (2009) Functional analysis of transcription factors in Arabidopsis. Plant Cell Physiol 50: 1232-1248
    • (2009) Plant Cell Physiol , vol.50 , pp. 1232-1248
    • Mitsuda, N.1    Ohme-Takagi, M.2
  • 31
    • 13244252316 scopus 로고    scopus 로고
    • Visualization of comparative genomic analyses by BLAST score ratio
    • Rasko DA, Myers GS, Ravel J (2005) Visualization of comparative genomic analyses by BLAST score ratio. BMC Bioinformatics 6: 2-2
    • (2005) BMC Bioinformatics , vol.6 , pp. 2
    • Rasko, D.A.1    Myers, G.S.2    Ravel, J.3
  • 34
    • 79954484794 scopus 로고    scopus 로고
    • Inductive double flower in Pharbitis nil using class-C MADS-box transcription factor with chimeric repressor silencing technology (CRES-T)
    • Sage-Ono K, Ozeki Y, Hiyama S, Higuchi Y, Kamada H, Mitsuda N, Ohme-Takagi M, Ono M (2011) Inductive double flower in Pharbitis nil using class-C MADS-box transcription factor with chimeric repressor silencing technology (CRES-T). Plant Biotechnol 28: 153-165
    • (2011) Plant Biotechnol , vol.28 , pp. 153-165
    • Sage-Ono, K.1    Ozeki, Y.2    Hiyama, S.3    Higuchi, Y.4    Kamada, H.5    Mitsuda, N.6    Ohme-Takagi, M.7    Ono, M.8
  • 35
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou N, Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4: 406-425
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 43
    • 66949124248 scopus 로고    scopus 로고
    • Stress-induced changes in the Arabidopsis thaliana transcriptome analyzed using whole genome tiling arrays
    • Zeller G, Henz SR, Widmer CK, Sachsenberg T, Ratsch G, Weigel D, Laubinger S (2009) Stress-induced changes in the Arabidopsis thaliana transcriptome analyzed using whole genome tiling arrays. Plant J 58: 1068-1082
    • (2009) Plant J , vol.58 , pp. 1068-1082
    • Zeller, G.1    Henz, S.R.2    Widmer, C.K.3    Sachsenberg, T.4    Ratsch, G.5    Weigel, D.6    Laubinger, S.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.