Structural physiology based on electron crystallography

Protein Science

Volumn 20, Issue 5, 2011, Pages 806-817

  Fujiyoshi, Yoshinori ^a  

^a KYOTO UNIVERSITY   (Japan)

Author keywords

Cryo electron microscope; Electron crystallography; Gap junction channel; High resolution electron microscopy; Ion channel; Membrane proteins; Structural physiology; Water channel

Indexed keywords

AQUAPORIN 1; AQUAPORIN 4; GAP JUNCTION PROTEIN; MEMBRANE PROTEIN; UNCLASSIFIED DRUG; WATER CHANNEL AQUAPORIN 1;

CELL MEMBRANE; CRYOELECTRON MICROSCOPY; CRYOPROTECTION; CRYSTALLOGRAPHY; ELECTRON CRYSTALLOGRAPHY; ELECTRON MICROSCOPY; HIGH RESOLUTION ELECTRON MICROSCOPY; IRRADIATION; NONHUMAN; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN DETERMINATION; PROTEIN EXPRESSION; PROTEIN FUNCTION; RADIATION INJURY; REVIEW;

ANIMALS; CRYOELECTRON MICROSCOPY; CRYSTALLOGRAPHY, X-RAY; HUMANS; LIPID BILAYERS; MEMBRANE PROTEINS; MODELS, MOLECULAR; PROTEIN CONFORMATION; PROTEIN STRUCTURE, SECONDARY;

EID: 79954454533     PISSN: 09618368     EISSN: 1469896X     Source Type: Journal    
DOI: 10.1002/pro.621     Document Type: Review

References (33)

1. + conduction and selectivity. Science 280:69-77. (Pubitemid 28169082)
2. + selectivity filter. Nature 414:37-42.
3. + channel-Fab complex at 2.0 A ° resolution. Nature 414:43-48. (Pubitemid 33041616)
4. + channel. Nature 423:42-48. (Pubitemid 36569578)
5. + channel in a lipid membrane-like environment. Nature 450:376-382. (Pubitemid 350126743)
6. Sato C, Ueno Y, Asai K, Takahashi K, Sato M, Engel A, Fujiyoshi Y (2001) The voltage-sensitive sodium channel is a bell-shaped molecule with several cavities. Nature 409:1047-1051. (Pubitemid 32204057)
7. Nagura H, Irie K, Imai T, Shomomura T, Hige T, Fujiyoshi Y (2010) Evidence for lateral mobility of voltage sensors in prokaryotic voltage-gated sodium channels. Biochem Biophys Res Commun 399:341-346.
8. Shimomura T, Irie K, Nagura H, Imai T, Fujiyoshi Y (2011) Arrangement and mobility of the voltage sensor domain in prokaryotic voltage-gated sodium channels. J Biol Chem 286:7409-7417.
9. Hiroaki Y, Tani K, Kamegawa A, Gyobu N, Nishikawa K, Suzuki H, Walz T, Sasaki S, Mitsuoka K, Kimura K, Mizoguchi A, Fujiyoshi Y (2006) Implications of the aquaporin-4 structure on Array formation and cell adhesion. J Mol Biol 355:628-639. (Pubitemid 41817624)
10. Kimura Y, Vassylyev DG, Miyazawa A, Kidera A, Matsushima M, Mitsuoka K, Murata K, Hirai T, Fujiyoshi Y (1997) Surface of bacteriorhodopsin revealed by high-resolution electron crystallography. Nature 389:206-211. (Pubitemid 27400606)
11. +-ATPase prevents reverse reaction of the transport cycle. EMBO J 28: 1637-1643.
12. Unwin N (1995) Acetylcholine receptor channel imaged in the open state. Nature 373:37-43.
13. Henderson R, Unwin PN (1975) Three-dimensional model of purple membrane obtained by electron microscopy. Nature 257:28-32.
14. Henderson R, Baldwin JM, Ceska TA, Zemlin F, Beckmann E, Downing KH (1990) Model for the structure of bacteriorhodopsin based on high-resolution electron cryo-microscopy. J Mol Biol 213:899-929. (Pubitemid 20213224)
15. Uyeda N, Kobayashi T, Ishizuka K, Fujiyoshi Y (1979) High voltage electron microscopy for image discrimination of constituent atoms in crystals and molecules. Chemia Scripta 14:47-61. (Pubitemid 10461186)
16. Uyeda N. Kobayashi T. Ishizuka K, Fujiyoshi Y (1980) Crystal structure of Ag-TCNQ. Nature 285:95-97.
17. Adrian M, Dubochet J, Lepault J, McDwall AW (1984) Cryo-electron microscopy of vuruses. Nature 308:32-36.
18. Hirai T, Murata K, Mitsuoka K, Kimura Y, Fujiyoshi Y (1999) Trehalose embedding technique for high-resolution electron crystallography. J Electron Microsc 48:653-658.
19. Fujiyoshi Y, Mizusaki T, Morikawa K, Yamagishi H, Aoki Y, Kihara H, Harada Y (1991) Development of a superfluid helium stage for high-resolution electron microscopy. Ultramicroscopy 38:241-251.
20. Fujiyoshi Y (1998) The structural study of membrane proteins by electron crystallography. Adv Biophys 35: 25-80. (Pubitemid 28566345)
21. Gyobu N, Tani K, Hiroaki Y, Kmegawa A, Mitsuoka K, Fujiyoshi Y (2004) Improved specimen preparation for cryo-electron microscopy using a symmetric carbon sandwich technique. J Struct Biol 146:325-333. (Pubitemid 38507434)
22. Gonen T, Cheng Y, Sliz P, Hiroaki Y, Fujiyoshi Y, Harrison SC, Walz T (2005) Lipid-protein interactions in double-layered two-dimensional AQP0 crystals. Nature 438:633-638. (Pubitemid 41740568)
23. Preston GM, Carroll TP, Guggino WB, Agre P (1992) Appearance of water channels in Xenopus oocytes expressing red cell CHIP28 protein. Science 256:385-387.
24. Murata K, Mitsuoka K, Hirai T, Walz T, Agre P, Heymann JB, Engel A, Fujiyoshi Y (2000) Structural determinants of water permeation through aquaporin-1. Nature 407:599-605.
25. Walz T, Hirai T, Murata K, Heymann JB, Mitsuoka K, Fujiyoshi Y, Smith BL, Agre P, Engel A (1997) Threedimensional structure of aquaporin 1. Nature 287:624-627.
26. Rash JE, Yasumura T, Hudson CS, Agre P, Nielsen S (1998) Direct immunogold labeling of aquaporin-4 in square arrays of astrocyte and ependymocyte plasma membranes in rat brain and spinal cord. Proc Natl Acad Sci USA 95:11981-11986. (Pubitemid 28460525)
27. Suzuki H, Nishikawa K, Hiroaki Y, Fujiyoshi Y (2008) Formation of aquaporin-4 arrays is inhibited by palmitoylation of N-terminal cysteine residues. Biochim Biophys Acta 1778:1181-1189.
28. Tani K, Mitsuma T, Hiroaki Y, Kamegawa A, Nishikawa K, Tanimura Y, Fujiyoshi Y (2009) Mechanism of aquaporin-4's fast and highly selective water conduction and proton exclusion. J Mol Biol 389:694-706.
29. Ho JD, Yeh R, Sandstrom A, Chorny I, Harries WEC, Robbins RA, Miercke LJW, Stroud RM (2009) Crystal structure of human aquaporin 4 at 1.8 A ° and its mechanism of conductance. Proc Natl Acad Sci USA 106: 7437-7442.
30. Kelsell DP, Dunlop J, Stevens HP, Lench NJ, Liang JN, Parry G, Leigh IM (1997) Connexin 26 mutations in hereditary non-syndromic sensorineural deafness. Nature 387:80-83. (Pubitemid 27202653)
31. Oshima A, Tani K, Hiroaki Y, Fujiyoshi Y, Sosinsky GE (2007) Roles of Met-34, Three-dimensional structure of a human connexin26 gap junction channel reveals a plug in the vestibule. Proc Natl Acad Sci USA 104:10034-10039. (Pubitemid 47175258)
32. Maeda S, Nakagawa S, Suga M, Yamashita E, Oshima A, Fujiyoshi Y, Tsukihara T (2009) Structure of the connexin-26 gap junction channel at 3.5 A ° resolution. Nature 458:597-602.
33. Oshima A, Tani K, Toloue MM, Hiroaki Y, Smock A, Inukai S, Cone A, Nicholson BJ, Sosinsky GE, Fujiyoshi Y (2011) Asymmetric configurations and N-terminal rearrangements in connexin26 gap junction channels. J Mol Biol 405:724-735.