Accurate prediction of the burial status of transmembrane residues of α-helix membrane protein by incorporating the structural and physicochemical features

Amino Acids

Volumn 40, Issue 3, 2011, Pages 991-1002

  Wang, Chengqi ^a   Li, Shuyan ^a   Xi, Lili ^a   Liu, Huanxiang ^b   Yao, Xiaojun ^a,b  

^a LANZHOU UNIVERSITY   (China)

^b LANZHOU UNIVERSITY   (China)

Author keywords

Burial status of transmembrane residues; Least squares support vector machine (LS SVM); Recursive feature elimination (RFE)

Indexed keywords

MEMBRANE PROTEIN;

ACCURACY; ALPHA HELIX; AMINO ACID COMPOSITION; ARTICLE; HYDROPHOBICITY; LIPID BILAYER; MATHEMATICAL MODEL; PHYSICAL CHEMISTRY; PREDICTION; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN STRUCTURE; REGRESSION ANALYSIS; SENSITIVITY AND SPECIFICITY; SEQUENCE ANALYSIS; SUPPORT VECTOR MACHINE;

AMINO ACID SEQUENCE; ANIMALS; FORECASTING; HUMANS; MEMBRANE PROTEINS; MOLECULAR SEQUENCE DATA; PHYSICOCHEMICAL PHENOMENA; PROTEIN FOLDING; PROTEIN STRUCTURE, SECONDARY;

EID: 79954436123     PISSN: 09394451     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00726-010-0727-8     Document Type: Article

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