The development and stability of the genus Bacteriodes from human gut microbiota in HFA mice model

Current Microbiology

Volumn 62, Issue 4, 2011, Pages 1107-1112

  Yuan, Jing ^a   Zeng, Benhua ^a   Niu, Rong ^a   Tang, Huan ^a   Li, Wenxia ^a   Zhang, Zhixue ^a   Wei, Hong ^a  

^a THIRD MILITARY MEDICAL UNIVERSITY   (China)

Author keywords

[No Author keywords available]

Indexed keywords

ANIMAL EXPERIMENT; ARTICLE; BACTERIAL COLONIZATION; BACTEROIDES; BACTEROIDES THETAIOTAOMICRON; CONTROLLED STUDY; DENATURING GRADIENT GEL ELECTROPHORESIS; FECES ANALYSIS; HUMAN; HUMAN VERSUS ANIMAL COMPARISON; INTESTINE FLORA; MICROBIAL COMMUNITY; MOLECULAR PHYLOGENY; MOUSE; NONHUMAN; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; SPECIES COMPOSITION; SPECIES DOMINANCE;

ANIMALS; BACTEROIDES; DNA, BACTERIAL; DNA, RIBOSOMAL; ELECTROPHORESIS, POLYACRYLAMIDE GEL; GASTROINTESTINAL TRACT; GERM-FREE LIFE; HUMANS; METAGENOME; MICE; MODELS, ANIMAL; MOLECULAR SEQUENCE DATA; PHYLOGENY;

BACTEROIDES; MUS;

EID: 79954425137     PISSN: 03438651     EISSN: 14320991     Source Type: Journal    
DOI: 10.1007/s00284-010-9833-9     Document Type: Article

References (28)

1. C Alpert S Sczesny B Gruhl M Blaut 2008 Long-term stability of the human gut microbiota in two different rat strains Curr Issues Mol Biol 10 17 24 18525103 1:CAS:528:DC%2BD1cXos1Wju7o%3D (Pubitemid 351756575)
2. F Backhed RE Ley JL Sonnenburg DA Peterson JI Gordon 2005 Host-bacterial mutualism in the human intestine Science 307 1915 1920 15790844 10.1126/science.1104816 (Pubitemid 40404694)
3. N Bernbom B Norrung P Saadbye L Molbak FK Vogensen TR Licht 2006 Comparison of methods and animal models commonly used for investigation of fecal microbiota: effects of time, host and gender J Microbiol Methods 66 87 95 16289391 10.1016/j.mimet.2005.10.014 1:CAS:528:DC%2BD28XltFOntbY%3D (Pubitemid 43786435)
4. PB Eckburg EM Bik CN Bernstein E Purdom L Dethlefsen M Sargent SR Gill KE Nelson DA Relman 2005 Diversity of the human intestinal microbial flora Science 308 1635 1638 15831718 10.1126/science.1110591 (Pubitemid 40807514)
5. CA Edwards C Rumney M Davies AM Parrett J Dore F Martin J Schmitt B Stahl E Norin T Midtvedt IR Rowland P Heavey H Kohler B Stocks H Schroten 2003 A human flora-associated rat model of the breast-fed infant gut J Pediatr Gastroenterol Nutr 37 168 177 12883304 10.1097/00005176-200308000-00016 (Pubitemid 39274544)
6. AH Franks HJ Harmsen GC Raangs GJ Jansen F Schut GW Welling 1998 Variations of bacterial populations in human feces measured by fluorescent in situ hybridization with group-specific 16S rRNA-targeted oligonucleotide probes Appl Environ Microbiol 64 3336 3345 9726880 1:CAS:528:DyaK1cXmtVajtrk%3D (Pubitemid 28411456)
7. P Gerard F Beguet P Lepercq L Rigottier-Gois V Rochet C Andrieux C Juste 2004 Gnotobiotic rats harboring human intestinal microbiota as a model for studying cholesterol-to-coprostanol conversion FEMS Microbiol Ecol 47 337 343 19712322 10.1016/S0168-6496(03)00285-X 1:CAS:528:DC%2BD2cXhslWgurw%3D (Pubitemid 38296610)
8. H Hayashi M Sakamoto Y Benno 2002 Phylogenetic analysis of the human gut microbiota using 16S rDNA clone libraries and strictly anaerobic culture-based methods Microbiol Immunol 46 535 548 12363017 1:CAS:528:DC%2BD38XntlCkur4%3D (Pubitemid 34947852)
9. MP Hazenberg M Bakker A Verschoor-Burggraaf 1981 Effects of the human intestinal flora on germ-free mice J Appl Bacteriol 50 95 106 7014548 1:STN:280:DyaL3M7ptFOkuw%3D%3D (Pubitemid 11189068)
10. K Hirayama 1999 Ex-germfree mice harboring intestinal microbiota derived from other animal species as an experimental model for ecology and metabolism of intestinal bacteria Exp Anim 48 219 227 10591000 10.1538/expanim.48.219 1:STN:280:DC%2BD3c%2FlvVGhuw%3D%3D (Pubitemid 129545811)
11. K Hirayama S Kawamura T Mitsuoka 1991 Development and stability of human faecal flora in the intestine of ex-germ-free mice Microbial Ecol Health Dis 4 95 99 10.3109/08910609109140269
12. K Hirayama K Itoh E Takahashi T Mitsuoka 1995 Comparison of composition of faecal microbiota and metabolism of faecal bacteria among 'human-flora-associated' mice inoculated with faeces from six different human donors Microbial Ecol Health Dis 8 199 211 10.3109/08910609509140098
13. PY Hong JH Wu WT Liu 2008 Relative abundance of Bacteroides spp. in stools and wastewaters as determined by hierarchical oligonucleotide primer extension Appl Environ Microbiol 74 2882 2893 18344347 10.1128/AEM.02568-07 1:CAS:528:DC%2BD1cXlslChsro%3D (Pubitemid 351632619)
14. A Imaoka H Setoyama A Takagi S Matsumoto Y Umesaki 2004 Improvement of human faecal flora-associated mouse model for evaluation of the functional foods J Appl Microbiol 96 656 663 15012802 10.1111/j.1365-2672.2004.02189.x 1:STN:280:DC%2BD2c7it1yntw%3D%3D (Pubitemid 38437824)
15. R Kibe M Sakamoto H Yokota H Ishikawa Y Aiba Y Koga Y Benno 2005 Movement and fixation of intestinal microbiota after administration of human feces to germfree mice Appl Environ Microbiol 71 3171 3178 15933018 10.1128/AEM.71.6. 3171-3178.2005 1:CAS:528:DC%2BD2MXlt1Okurs%3D (Pubitemid 40807227)
16. RE Ley F Backhed P Turnbaugh CA Lozupone RD Knight JI Gordon 2005 Obesity alters gut microbial ecology Proc Natl Acad Sci USA 102 11070 11075 16033867 10.1073/pnas.0504978102 1:CAS:528:DC%2BD2MXnvVWju7g%3D (Pubitemid 41105994)
17. TR Licht B Madsen A Wilcks 2007 Selection of bacteria originating from a human intestinal microbiota in the gut of previously germ-free rats FEMS Microbiol Lett 277 205 209 18031341 10.1111/j.1574-6968.2007.00962.x 1:CAS:528:DC%2BD2sXhsVersL%2FK (Pubitemid 350145581)
18. C Liu Y Song M McTeague AW Vu H Wexler SM Finegold 2003 Rapid identification of the species of the Bacteroides fragilis group by multiplex PCR assays using group- and species-specific primers FEMS Microbiol Lett 222 9 16 12757940 10.1016/S0378-1097(03)00296-9 1:CAS:528:DC%2BD3sXjvV2lu70%3D (Pubitemid 36577346)
19. G Muyzer EC de Waal AG Uitterlinden 1993 Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA Appl Environ Microbiol 59 695 700 7683183 1:CAS:528:DyaK3sXit1Kktrk%3D (Pubitemid 23072343)
20. X Pang D Ding G Wei M Zhang L Wang L Zhao 2005 Molecular profiling of Bacteroides spp. in human feces by PCR-temperature gradient gel electrophoresis J Microbiol Methods 61 413 417 15767017 10.1016/j.mimet.2004.12.012 1:CAS:528:DC%2BD2MXitlektrg%3D (Pubitemid 40568592)
21. P Raibaud R Ducluzeau F Dubos S Hudault H Bewa MC Muller 1980 Implantation of bacteria from the digestive tract of man and various animals into gnotobiotic mice Am J Clin Nutr 33 2440 2447 7001883 1:STN:280: DyaL3M%2FlvFClsw%3D%3D (Pubitemid 11170981)
22. CJ Sanguinetti E Dias Neto AJ Simpson 1994 Rapid silver staining and recovery of PCR products separated on polyacrylamide gels Biotechniques 17 914 921 7840973 1:CAS:528:DyaK2MXhvFGnsbw%3D
23. RM Satokari EE Vaughan AD Akkermans M Saarela WM de Vos 2001 Bifidobacterial diversity in human feces detected by genus-specific PCR and denaturing gradient gel electrophoresis Appl Environ Microbiol 67 504 513 11157210 10.1128/AEM.67.2.504-513.2001 1:CAS:528:DC%2BD3MXhtFSmt7s%3D (Pubitemid 32121335)
24. J Shen B Zhang G Wei X Pang H Wei M Li Y Zhang W Jia L Zhao 2006 Molecular profiling of the Clostridium leptum subgroup in human fecal microflora by PCR-denaturing gradient gel electrophoresis and clone library analysis Appl Environ Microbiol 72 5232 5238 16885270 10.1128/AEM.00151-06 1:CAS:528:DC%2BD28XosVKlsr0%3D
25. PJ Turnbaugh RE Ley MA Mahowald V Magrini ER Mardis JI Gordon 2006 An obesity-associated gut microbiome with increased capacity for energy harvest Nature 444 1027 1031 17183312 10.1038/nature05414 (Pubitemid 46018515)
26. KH Wilson JS Ikeda RB Blitchington 1997 Phylogenetic placement of community members of human colonic biota Clin Infect Dis 25 S114 S116 9310646 10.1086/516230
27. J Xu MK Bjursell J Himrod S Deng LK Carmichael HC Chiang LV Hooper JI Gordon 2003 A genomic view of the human-Bacteroides thetaiotaomicron symbiosis Science 299 2074 2076 12663928 10.1126/science.1080029 1:CAS:528: DC%2BD3sXitlCisL0%3D (Pubitemid 36383735)
28. J Zaneveld PJ Turnbaugh C Lozupone RE Ley M Hamady JI Gordon R Knight 2008 Host-bacterial coevolution and the search for new drug targets Curr Opin Chem Biol 12 109 114 18280814 10.1016/j.cbpa.2008.01.015 1:CAS:528: DC%2BD1cXktFelsLY%3D